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Yeast Phenotype (YP): intracellular transport

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Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term (+ for parents, - for children) YP term [YP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   observable [APO:0000017] <7>
+ 1:   cellular processes [APO:0000066] <6>(218|225) (221|88|20)
0:   intracellular transport [APO:0000073] <6>(6|6) (7|1|1)
- 1:   autophagy [APO:0000074] <7>(0|2) (0|0|0)
- 1:   organelle distribution [APO:0000296] <7>(0|0) (0|0|0)
- 1:   protein transport [APO:0000129] <5>(2|1) (2|0|0)
- 1:   RNA localization [APO:0000132](0|0) (0|0|0)
- 1:   endocytosis [APO:0000075](2|2) (2|0|0)
- 1:   small molecule transport [APO:0000130](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SH3-domain0.00002112Direct
SAICAR synthase-like0.000191Direct
Actin depolymerizing proteins0.001344Inherited
ARM repeat0.001582Inherited
Prefoldin0.002868Inherited
SNARE-like0.03124Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DJ-1/PfpI0Direct
SH3-domain0.0000205Direct
Prefoldin0.0001491Direct
Cofilin-like0.001033Inherited
Clathrin coat assembly domain0.02104Inherited
G proteins0.06889Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SH3-domain0.00001728Direct
SAICAR synthase-like0.000157Direct
ENTH/VHS domain0.0009822Direct
Actin depolymerizing proteins0.001116Inherited
ARM repeat0.001317Inherited
Prefoldin0.002398Inherited
SNARE-like0.02723Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50615,52540
  • 50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50615,52540,47917
  • 50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)