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Yeast Phenotype (YP): utilization of nitrogen source

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Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term (+ for parents, - for children) YP term [YP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   observable [APO:0000017] <7>
+ + 2:   metabolism and growth [APO:0000094] <13>(76|72) (77|35|7)
+ 1:   nutrient utilization [APO:0000096] <9>(21|18) (21|8|1)
0:   utilization of nitrogen source [APO:0000099](7|5) (7|2|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Tryptophan synthase beta subunit-like PLP-dependent enzymes0.0000008168Direct
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain0.0003477Direct
NAD(P)-binding Rossmann-fold domains0.0003566Direct
PreATP-grasp domain0.0005799Direct
SAICAR synthase-like0.0005799Direct
TK C-terminal domain-like0.0005799Direct
Glutathione synthetase ATP-binding domain-like0.0006524Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Tryptophan synthase beta subunit-like PLP-dependent enzymes0.000001373Direct
Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain0.0004228Direct
Class I glutamine amidotransferases (GAT)0.0006139Direct
BC N-terminal domain-like0.000636Direct
BC ATP-binding domain-like0.000636Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Tryptophan synthase beta subunit-like PLP-dependent enzymes0.0000006659Direct
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain0.0002866Direct
NAD(P)-binding Rossmann-fold domains0.0002942Direct
TK C-terminal domain-like0.0004797Direct
PreATP-grasp domain0.0004797Direct
SAICAR synthase-like0.0004797Direct
Glutathione synthetase ATP-binding domain-like0.0005403Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51735,55347
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
  • 0.0002866Direct
    52440,56059
  • 52440 - PreATP-grasp domain
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 0.0004797Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)