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Yeast Phenotype (YP): vegetative growth

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Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term (+ for parents, - for children) YP term [YP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   observable [APO:0000017] <7>
+ 1:   metabolism and growth [APO:0000094] <13>(76|72) (77|35|7)
0:   vegetative growth [APO:0000106] <3>(12|16) (12|9|1)
- 1:   growth in exponential phase [APO:0000310](0|0) (0|1|0)
- 1:   growth in post-diauxic phase [APO:0000311](0|0) (0|0|0)
- 1:   survival rate in stationary phase [APO:0000109](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Prefoldin0Direct
Ribosomal protein L60Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
SAICAR synthase-like0Direct
F1F0 ATP synthase subunit C0Direct
Ribosomal protein L130Direct
FtsH protease domain-like0Direct
S13-like H2TH domain0Direct
Ribosomal protein L140Direct
tRNA-binding arm0Direct
RNase III domain-like0Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Ribosomal protein L130Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Vacuolar sorting protein domain0Direct
CheY-related0Direct
Ribosomal protein S130Direct
Ribosomal protein L60Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Tryptophan biosynthesis enzymes0Direct
FtsH protease domain-like0Direct
La domain0Direct
Ribosomal protein L140Direct
F1F0 ATP synthase subunit C0Direct
C-terminal domain of ribosomal protein L20Direct
Prefoldin0Direct
SAM (sterile alpha motif) domain0Direct
Elongation factors0.00002667Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Ribosomal protein L130Direct
FtsH protease domain-like0Direct
F1F0 ATP synthase subunit C0Direct
Ribosomal protein L140Direct
RNase III domain-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
S13-like H2TH domain0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
SAICAR synthase-like0Direct
Prefoldin0Direct
Ribosomal protein L60Direct
tRNA-binding arm0Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50615,52540
  • 50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    56053,56053
  • 56053 - Ribosomal protein L6
  • 56053 - Ribosomal protein L6
  • 0Direct
    49879,56112
  • 49879 - SMAD/FHA domain
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0Direct
    52540,140990
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 140990 - FtsH protease domain-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0Direct
    50249,50104
  • 50249 - Nucleic acid-binding proteins
  • 50104 - Translation proteins SH3-like domain
  • 0Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.1434Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50615,52540,47917
  • 50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)