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Yeast Phenotype (YP): subcellular morphology

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Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term (+ for parents, - for children) YP term [YP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   observable [APO:0000017] <7>
+ + 2:   morphology [APO:0000049] <2>(23|20) (25|7|2)
+ 1:   cellular morphology [APO:0000050] <6>(18|16) (20|6|1)
0:   subcellular morphology [APO:0000226] <6>(12|8) (13|5|0)
- 1:   endomembrane system morphology [APO:0000303] <5>(0|2) (1|0|0)
- 1:   cell wall morphology [APO:0000053] <2>(2|1) (2|0|0)
- 1:   cytoskeleton morphology [APO:0000054] <2>(1|1) (1|0|0)
- 1:   lipid particle morphology [APO:0000242](2|1) (2|0|0)
- 1:   mitochondrial morphology [APO:0000055](3|1) (3|2|0)
- 1:   plasma membrane morphology [APO:0000315](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
F1F0 ATP synthase subunit C0Direct
FtsH protease domain-like0Direct
SAICAR synthase-like0.0002818Direct
Cyclin-like0.000461Direct
Thiolase-like0.007331Inherited
PP2C-like0.05518Inherited
Nucleotide-diphospho-sugar transferases0.2443Inherited
C-terminal domain of alpha and beta subunits of F1 ATP synthase0.2558Inherited
N-terminal domain of alpha and beta subunits of F1 ATP synthase0.2558Inherited
SH3-domain0.3133Inherited
PH domain-like0.3789Inherited
alpha/beta-Hydrolases0.4162Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
FtsH protease domain-like0Direct
F1F0 ATP synthase subunit C0Direct
Cyclin0.002222Inherited
GHMP Kinase, N-terminal domain0.01613Inherited
PP2C-like0.04968Inherited
Tyrosine-dependent oxidoreductases0.1599Inherited
SH3-domain0.2869Inherited
Actin/HSP700.6388Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
FtsH protease domain-like0Direct
F1F0 ATP synthase subunit C0Direct
SAICAR synthase-like0.0002321Direct
Cyclin-like0.0003812Direct
Thiolase-like0.006212Inherited
PP2C-like0.04902Inherited
Nucleotide-diphospho-sugar transferases0.2294Inherited
C-terminal domain of alpha and beta subunits of F1 ATP synthase0.2411Inherited
N-terminal domain of alpha and beta subunits of F1 ATP synthase0.2411Inherited
Sm-like ribonucleoproteins0.2819Inherited
SH3-domain0.2974Inherited
PH domain-like0.3618Inherited
alpha/beta-Hydrolases0.3984Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0Direct
    52540,140990
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 140990 - FtsH protease domain-like
  • 0Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0009051Direct
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.03719Inherited
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0.2411Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)