SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Zebrafish Anatomy (ZA): pharyngeal arch 3-7 skeleton

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   anatomical system [ZFA:0001439] <18>(160|190) (165|119|58)
+ + + + 4:   organism subdivision [ZFA:0001308] <10>(67|75) (70|51|30)
+ + + + 4:   whole organism [ZFA:0001094] <8>(266|287) (266|151|71)
+ + + + 4:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + 3:   anatomical structure [ZFA:0000037] <16>(269|288) (269|153|73)
+ + + 3:   skeletal system [ZFA:0000434] <6>(8|9) (11|4|3)
+ + + 3:   respiratory system [ZFA:0000272] <1>(1|2) (2|0|0)
+ + + 3:   multi-tissue structure [ZFA:0001488] <202>(67|77) (68|48|24)
+ + + 3:   head [ZFA:0001114] <15>(28|35) (31|19|16)
+ + + 3:   compound organ [ZFA:0000496] <12>(97|109) (102|74|33)
+ + + 3:   digestive system [ZFA:0000339] <11>(5|9) (9|2|1)
+ + 2:   cranium [ZFA:0000737] <11>(5|6) (7|1|1)
+ + 2:   gill [ZFA:0000354] <7>(1|2) (2|0|0)
+ + 2:   pharynx [ZFA:0000056] <8>(1|3) (3|0|0)
+ + 2:   anatomical group [ZFA:0001512] <5>(173|202) (177|125|60)
+ + 2:   pharyngeal arch [ZFA:0001306] <6>(5|6) (6|2|2)
+ 1:   splanchnocranium [ZFA:0001216] <5>(4|4) (5|1|1)
+ 1:   anatomical cluster [ZFA:0001478] <54>(36|54) (40|28|21)
+ 1:   pharyngeal arch 3-7 [ZFA:0001613] <8>(1|2) (2|0|0)
0:   pharyngeal arch 3-7 skeleton [ZFA:0000095] <15>(0|1) (1|0|0)
- 1:   pharyngeal arch 4 skeleton [ZFA:0001231] <8>(0|0) (0|0|0)
- 1:   pharyngeal arch 5 skeleton [ZFA:0001232] <8>(0|0) (0|0|0)
- 1:   pharyngeal arch 6 skeleton [ZFA:0001230] <7>(0|0) (0|0|0)
- 1:   pharyngeal arch 3 skeleton [ZFA:0001228] <6>(0|0) (0|0|0)
- 1:   ceratobranchial bone [ZFA:0000488] <5>(0|1) (1|0|0)
- 1:   ceratobranchial cartilage [ZFA:0001516] <5>(0|0) (0|0|0)
- 1:   epibranchial bone [ZFA:0000658] <5>(0|0) (0|0|0)
- 1:   epibranchial cartilage [ZFA:0001527] <5>(0|0) (0|0|0)
- 1:   basibranchial [ZFA:0000170] <4>(0|0) (0|0|0)
- 1:   hypobranchial bone [ZFA:0000363] <4>(0|0) (0|0|0)
- 1:   hypobranchial cartilage [ZFA:0001522] <4>(0|0) (0|0|0)
- 1:   pharyngeal arch 7 skeleton [ZFA:0001229] <3>(0|1) (1|0|0)
- 1:   copula [ZFA:0001220] <2>(0|0) (0|0|0)
- 1:   pharyngobranchial bone [ZFA:0000527] <2>(0|0) (0|0|0)
- 1:   gill raker [ZFA:0000356](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
HMG-box0.02968Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
HMG-box0.02518Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)