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Zebrafish Anatomy (ZA): forebrain

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Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   anatomical group [ZFA:0001512] <5>(173|202) (177|125|60)
+ + + + 4:   whole organism [ZFA:0001094] <8>(266|287) (266|151|71)
+ + + + 4:   anatomical system [ZFA:0001439] <18>(160|190) (165|119|58)
+ + + 3:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + 3:   compound organ [ZFA:0000496] <12>(97|109) (102|74|33)
+ + + 3:   nervous system [ZFA:0000396] <9>(55|55) (58|31|16)
+ + 2:   cavitated compound organ [ZFA:0001490] <15>(79|90) (80|57|22)
+ + 2:   central nervous system [ZFA:0000012] <10>(26|25) (28|14|9)
+ + 2:   anatomical structure [ZFA:0000037] <16>(269|288) (269|153|73)
+ 1:   brain [ZFA:0000008] <12>(17|16) (18|11|7)
+ 1:   multi-tissue structure [ZFA:0001488] <202>(67|77) (68|48|24)
0:   forebrain [ZFA:0000109] <6>(8|8) (9|4|3)
- 1:   diencephalon [ZFA:0000101] <17>(7|8) (8|4|3)
- 1:   telencephalon [ZFA:0000079] <10>(2|2) (3|0|0)
- 1:   lateral forebrain bundle [ZFA:0007012] <2>(0|0) (0|0|0)
- 1:   forebrain ventricle [ZFA:0001259](0|0) (0|0|0)
- 1:   telencephalon diencephalon boundary [ZFA:0001343](0|0) (0|0|0)
- 1:   thalamic eminence [ZFA:0007010](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.0003807Direct
lambda repressor-like DNA-binding domains0.003453Inherited
Cadherin-like0.02183Inherited
Fibronectin type III0.04746Inherited
Cytochrome P4500.08552Inherited
Cyclin-like0.1365Inherited
beta-beta-alpha zinc fingers0.2784Inherited
Immunoglobulin0.4799Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.00008067Direct
POU-specific domain0.0001488Direct
Cadherin0.01293Inherited
Fibronectin type III0.03977Inherited
Cytochrome P4500.07313Inherited
Classic zinc finger, C2H20.1054Inherited
Transforming growth factor (TGF)-beta0.1276Inherited
I set domains0.231Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.0002272Direct
lambda repressor-like DNA-binding domains0.002225Inherited
Cadherin-like0.01547Inherited
Fibronectin type III0.03507Inherited
Cystine-knot cytokines0.03787Inherited
Cytochrome P4500.06712Inherited
Cyclin-like0.1125Inherited
beta-beta-alpha zinc fingers0.2468Inherited
Immunoglobulin0.4471Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.008236Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.02753Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.1496Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.397Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.005678Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.02385Inherited
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.2228Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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