SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Zebrafish Anatomy (ZA): sensory system

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + 3:   anatomical structure [ZFA:0000037] <16>(269|288) (269|153|73)
+ + 2:   anatomical group [ZFA:0001512] <5>(173|202) (177|125|60)
+ + 2:   whole organism [ZFA:0001094] <8>(266|287) (266|151|71)
+ 1:   anatomical system [ZFA:0001439] <18>(160|190) (165|119|58)
+ 1:   nervous system [ZFA:0000396] <9>(55|55) (58|31|16)
0:   sensory system [ZFA:0000282] <5>(22|23) (23|12|6)
- 1:   lateral line system [ZFA:0000034] <13>(3|2) (3|2|1)
- 1:   gustatory system [ZFA:0001101] <10>(0|0) (0|0|0)
- 1:   olfactory system [ZFA:0001149] <5>(3|1) (3|0|0)
- 1:   vestibuloauditory system [ZFA:0001138] <4>(4|5) (4|0|2)
- 1:   visual system [ZFA:0001127] <2>(9|14) (10|9|5)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
JAB1/MPN domain0Direct
BRK domain-like0Direct
ADC-like0Direct
Tubulin nucleotide-binding domain-like0Direct
Single hybrid motif0Direct
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit0Direct
Tubulin C-terminal domain-like0Direct
Cdc48 domain 2-like0Direct
Glutathione synthetase ATP-binding domain-like0Direct
Composite domain of metallo-dependent hydrolases0Direct
Nucleotide cyclase0Direct
WD40 repeat-like0.001667Inherited
Serine protease inhibitors0.07688Inherited
Arginase/deacetylase0.105Inherited
Multidrug efflux transporter AcrB transmembrane domain0.1954Inherited
NAD(P)-binding Rossmann-fold domains0.233Inherited
BAR/IMD domain-like0.2569Inherited
HMG-box0.3355Inherited
Growth factor receptor domain0.6411Inherited
Fibronectin type III0.7487Inherited
EGF/Laminin0.9931Inherited
Immunoglobulin1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
BRK domain-like0Direct
Connexin430Direct
Cdc48 domain 2-like0Direct
Hydantoinase (dihydropyrimidinase)0Direct
Biotinyl/lipoyl-carrier proteins and domains0Direct
Hydantoinase (dihydropyrimidinase), catalytic domain0Direct
Cdc48 N-terminal domain-like0Direct
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit0Direct
Tubulin, GTPase domain0Direct
Tubulin, C-terminal domain0Direct
Adenylyl and guanylyl cyclase catalytic domain0Direct
C5 cytosine-specific DNA methylase, DCM0Direct
WD40-repeat0.001553Inherited
Multidrug efflux transporter AcrB transmembrane domain0.02692Inherited
Aquaporin-like0.08175Inherited
Histone deacetylase, HDAC0.08175Inherited
Growth factor receptor domain0.1595Inherited
Tetratricopeptide repeat (TPR)0.1656Inherited
Paired domain0.2278Inherited
Motor proteins0.2479Inherited
HMG-box0.28Inherited
Fibronectin type III0.6834Inherited
EGF-type module0.9902Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Single hybrid motif0Direct
Tubulin C-terminal domain-like0Direct
Composite domain of metallo-dependent hydrolases0Direct
ADC-like0Direct
Glutathione synthetase ATP-binding domain-like0Direct
Tubulin nucleotide-binding domain-like0Direct
BRK domain-like0Direct
Cdc48 domain 2-like0Direct
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit0Direct
Nucleotide cyclase0Direct
JAB1/MPN domain0Direct
WD40 repeat-like0.001043Inherited
Serine protease inhibitors0.0597Inherited
Aquaporin-like0.08416Inherited
Arginase/deacetylase0.08416Inherited
Multidrug efflux transporter AcrB transmembrane domain0.1666Inherited
NAD(P)-binding Rossmann-fold domains0.2023Inherited
BAR/IMD domain-like0.2256Inherited
HMG-box0.3027Inherited
Growth factor receptor domain0.6158Inherited
Fibronectin type III0.7287Inherited
EGF/Laminin0.9945Inherited
Immunoglobulin1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50978,50998
  • 50978 - WD40 repeat-like
  • 50998 - Quinoprotein alcohol dehydrogenase-like
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54001,143791
  • 54001 - Cysteine proteinases
  • 143791 - DUSP-like
  • 0Direct
    51556,51338
  • 51556 - Metallo-dependent hydrolases
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 0Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0Direct
    57362,57362
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 0Direct
    52058,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0Direct
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.4646Inherited
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.626Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.8418Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 1Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,52058,49265
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    52058,49265,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.5473Inherited
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.5555Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)