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Zebrafish Anatomy (ZA): muscle

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   anatomical group [ZFA:0001512] <5>(171|201) (175|125|60)
+ + + 3:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + 3:   whole organism [ZFA:0001094] <8>(265|285) (265|151|71)
+ + 2:   anatomical system [ZFA:0001439] <18>(158|189) (163|119|58)
+ + 2:   anatomical structure [ZFA:0000037] <16>(268|286) (268|153|73)
+ 1:   musculature system [ZFA:0000548] <5>(9|12) (11|9|6)
+ 1:   portion of tissue [ZFA:0001477] <232>(42|45) (47|31|19)
0:   muscle [ZFA:0005145] <31>(8|11) (10|8|5)
- 1:   myotome [ZFA:0001056] <33>(3|3) (3|3|1)
- 1:   epaxial myotome region [ZFA:0001084] <30>(0|0) (0|0|0)
- 1:   hypaxial myotome region [ZFA:0001085] <30>(0|0) (0|0|0)
- 1:   skeletal muscle [ZFA:0005277] <15>(6|8) (7|6|5)
- 1:   cardiac muscle [ZFA:0005280] <5>(0|0) (0|0|0)
- 1:   smooth muscle [ZFA:0005274] <5>(0|0) (0|0|0)
- 1:   head muscle [ZFA:0001652] <3>(0|0) (0|0|0)
- 1:   muscle cell [ZFA:0009114] <3>(8|10) (9|7|5)
- 1:   hypural muscle [ZFA:0000902] <1>(0|0) (0|0|0)
- 1:   anal protractor [ZFA:0005897](0|0) (0|0|0)
- 1:   anal retractor [ZFA:0005896](0|0) (0|0|0)
- 1:   coracoradialis [ZFA:0000492](0|0) (0|0|0)
- 1:   dorsal fin protractor [ZFA:0005816](0|0) (0|0|0)
- 1:   dorsal fin retractor [ZFA:0005817](0|0) (0|0|0)
- 1:   dorsal oblique extraocular muscle [ZFA:0000738](0|0) (0|0|0)
- 1:   dorsal rectus [ZFA:0000345](0|0) (0|0|0)
- 1:   esophageal striated muscle [ZFA:0005785](0|0) (0|0|0)
- 1:   hypaxialis [ZFA:0000362](0|0) (0|0|0)
- 1:   infracarinalis [ZFA:0000216](0|0) (0|0|0)
- 1:   interradialis caudalis [ZFA:0000528](0|0) (0|0|0)
- 1:   lateral rectus [ZFA:0000383](0|0) (0|0|0)
- 1:   longitudinal hypochordal [ZFA:0000230](0|0) (0|0|0)
- 1:   medial rectus [ZFA:0000301](0|0) (0|0|0)
- 1:   pectoral protractor [ZFA:0005863](0|0) (0|0|0)
- 1:   pericardial muscle [ZFA:0001653](0|0) (0|0|0)
- 1:   superficial lateralis [ZFA:0000286](0|0) (0|0|0)
- 1:   supracarinalis [ZFA:0000288](0|0) (0|0|0)
- 1:   ventral intermandibularis anterior [ZFA:0007008](0|0) (0|0|0)
- 1:   ventral intermandibularis posterior [ZFA:0007048](0|0) (0|0|0)
- 1:   ventral oblique extraocular muscle [ZFA:0000861](0|0) (0|0|0)
- 1:   ventral rectus [ZFA:0000457](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Troponin coil-coiled subunits0.000009737Direct
GroEL-intermediate domain like0.00189Inherited
Multidrug efflux transporter AcrB transmembrane domain0.006557Inherited
Myosin rod fragments0.008506Inherited
IP3 receptor type 1 binding core, domain 20.02065Inherited
GroEL apical domain-like0.02175Inherited
GroEL equatorial domain-like0.04292Inherited
MIR domain0.06018Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Troponin T0Direct
Myotubularin-like phosphatases0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00003907Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.0002709Direct
Group II chaperonin (CCT, TRIC), apical domain0.001186Inherited
Myosin rod fragments0.005508Inherited
WW domain0.01129Inherited
Multidrug efflux transporter AcrB transmembrane domain0.01453Inherited
MIR domain0.04575Inherited
Laminin-type module0.05359Inherited
Kelch motif0.07Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Troponin coil-coiled subunits0.000005518Direct
GroEL-intermediate domain like0.001186Inherited
Multidrug efflux transporter AcrB transmembrane domain0.004318Inherited
Myosin rod fragments0.005701Inherited
WW domain0.01166Inherited
IP3 receptor type 1 binding core, domain 20.01454Inherited
GroEL apical domain-like0.01539Inherited
GroEL equatorial domain-like0.03143Inherited
MIR domain0.04533Inherited
Kelch motif0.07009Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
82109,82109
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 0Direct
    100909,49899
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.001186Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001186Inherited
    82109,100909
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0.01454Inherited
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.01454Inherited
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.03865Inherited
    53300,53300
  • 53300 - vWA-like
  • 53300 - vWA-like
  • 0.04533Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    82109,100909,49899
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    82109,82109,100909
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001186Inherited
    48726,49265,48726
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.01454Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.02493Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)