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Zebrafish Anatomy (ZA): eye

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + + 4:   anatomical group [ZFA:0001512] <5>(171|201) (175|125|60)
+ + + 3:   nervous system [ZFA:0000396] <9>(53|54) (56|32|16)
+ + + 3:   anatomical structure [ZFA:0000037] <16>(268|286) (268|153|73)
+ + + 3:   whole organism [ZFA:0001094] <8>(265|285) (265|151|71)
+ + + 3:   anatomical system [ZFA:0001439] <18>(158|189) (163|119|58)
+ + 2:   sensory system [ZFA:0000282] <5>(20|23) (21|12|6)
+ + 2:   organism subdivision [ZFA:0001308] <10>(69|75) (72|51|30)
+ + 2:   compound organ [ZFA:0000496] <12>(97|108) (101|75|33)
+ 1:   head [ZFA:0001114] <15>(30|35) (33|19|16)
+ 1:   visual system [ZFA:0001127] <2>(9|15) (10|9|5)
+ 1:   cavitated compound organ [ZFA:0001490] <15>(77|89) (79|58|22)
0:   eye [ZFA:0000107] <10>(9|14) (10|9|5)
- 1:   anterior segment eye [ZFA:0005566] <6>(0|1) (1|0|0)
- 1:   posterior segment eye [ZFA:0005567] <3>(5|6) (5|4|3)
- 1:   sclera [ZFA:0005563] <1>(0|0) (0|0|0)
- 1:   Schlemm's canal [ZFA:0005829](0|0) (0|0|0)
- 1:   corneal primordium [ZFA:0001688](0|0) (0|0|0)
- 1:   corneo-scleral junction [ZFA:0005570](0|0) (0|0|0)
- 1:   optic furrow [ZFA:0005491](0|0) (0|0|0)
- 1:   pupil [ZFA:0001283](0|0) (0|0|0)
- 1:   ventral canal eye [ZFA:0005571](0|0) (0|0|0)
- 1:   zonule [ZFA:0005573](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Single hybrid motif0Direct
ADC-like0Direct
Cdc48 domain 2-like0Direct
Composite domain of metallo-dependent hydrolases0Direct
Nucleotide cyclase0Direct
BRK domain-like0Direct
WD40 repeat-like0.003576Inherited
Multidrug efflux transporter AcrB transmembrane domain0.113Inherited
NAD(P)-binding Rossmann-fold domains0.1537Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Cdc48 N-terminal domain-like0Direct
BRK domain-like0Direct
Connexin430Direct
Biotinyl/lipoyl-carrier proteins and domains0Direct
Adenylyl and guanylyl cyclase catalytic domain0Direct
Hydantoinase (dihydropyrimidinase), catalytic domain0Direct
C5 cytosine-specific DNA methylase, DCM0Direct
Cdc48 domain 2-like0Direct
Hydantoinase (dihydropyrimidinase)0Direct
WD40-repeat0.004451Inherited
Multidrug efflux transporter AcrB transmembrane domain0.01208Inherited
Aquaporin-like0.07322Inherited
Motor proteins0.3374Inherited
Tetratricopeptide repeat (TPR)0.408Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Composite domain of metallo-dependent hydrolases0Direct
Nucleotide cyclase0Direct
BRK domain-like0Direct
Single hybrid motif0Direct
ADC-like0Direct
Cdc48 domain 2-like0Direct
WD40 repeat-like0.002305Inherited
Aquaporin-like0.07606Inherited
Multidrug efflux transporter AcrB transmembrane domain0.09111Inherited
NAD(P)-binding Rossmann-fold domains0.128Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57362,57362
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54001,143791
  • 54001 - Cysteine proteinases
  • 143791 - DUSP-like
  • 0Direct
    50978,50998
  • 50978 - WD40 repeat-like
  • 50998 - Quinoprotein alcohol dehydrogenase-like
  • 0Direct
    52058,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0Direct
    51556,51338
  • 51556 - Metallo-dependent hydrolases
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 0Direct
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.3039Inherited
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.4128Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52058,49265,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0Direct
    57184,52058,49265
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.3493Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)