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Zebrafish Anatomy (ZA): embryonic structure

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   zebrafish anatomical entity [ZFA:0100000] <6>
+ 1:   whole organism [ZFA:0001094] <8>(265|285) (265|151|71)
+ 1:   anatomical structure [ZFA:0000037] <16>(268|286) (268|153|73)
0:   embryonic structure [ZFA:0001105] <50>(6|7) (6|0|1)
- 1:   presumptive structure [ZFA:0001116] <12>(1|1) (1|0|0)
- 1:   presumptive brain [ZFA:0000146] <5>(0|0) (0|0|0)
- 1:   blastoderm [ZFA:0001176] <3>(0|0) (0|0|0)
- 1:   germ ring [ZFA:0000111] <3>(0|1) (1|0|0)
- 1:   neurogenic placode [ZFA:0001309] <3>(2|1) (2|0|0)
- 1:   otic vesicle [ZFA:0000051] <3>(2|2) (2|0|0)
- 1:   yolk syncytial layer [ZFA:0000088] <3>(0|0) (0|0|0)
- 1:   pancreatic bud [ZFA:0001390] <2>(0|0) (0|0|0)
- 1:   proneural cluster [ZFA:0000068] <2>(0|0) (0|0|0)
- 1:   tail bud [ZFA:0000077] <2>(1|1) (1|0|1)
- 1:   blastodisc [ZFA:0001175] <1>(0|0) (0|0|0)
- 1:   hypoblast [ZFA:0000117] <1>(0|0) (0|0|0)
- 1:   margin [ZFA:0000038] <1>(0|0) (0|0|0)
- 1:   Brachet's cleft [ZFA:0000000](0|0) (0|0|0)
- 1:   DEL [ZFA:0000711](0|0) (0|0|0)
- 1:   EVL [ZFA:0000086](0|0) (0|0|0)
- 1:   Kupffer's vesicle [ZFA:0000001](1|0) (1|0|1)
- 1:   epiblast [ZFA:0000018](0|0) (0|0|0)
- 1:   forerunner cell group [ZFA:0000023](0|0) (0|0|0)
- 1:   hatching gland [ZFA:0000026](0|0) (0|0|0)
- 1:   liver primordium [ZFA:0000124](0|0) (0|0|0)
- 1:   pancreas primordium [ZFA:0000254](0|0) (0|0|0)
- 1:   pectoral fin field [ZFA:0001453](0|0) (0|0|0)
- 1:   polster [ZFA:0000058](0|0) (0|0|0)
- 1:   presumptive cephalic mesoderm [ZFA:0000414](0|0) (0|0|0)
- 1:   presumptive diencephalon [ZFA:0000574](0|0) (0|0|0)
- 1:   presumptive floor plate [ZFA:0001218](0|0) (0|0|0)
- 1:   presumptive forebrain [ZFA:0000062](0|0) (0|0|0)
- 1:   presumptive forebrain midbrain boundary [ZFA:0001368](0|0) (0|0|0)
- 1:   presumptive hindbrain [ZFA:0000569](0|0) (0|0|0)
- 1:   presumptive intervening zone [ZFA:0001342](0|0) (0|0|0)
- 1:   presumptive lateral nucleus of ventral telencephalon [ZFA:0005911](0|0) (0|0|0)
- 1:   presumptive midbrain [ZFA:0000148](0|0) (0|0|0)
- 1:   presumptive midbrain hindbrain boundary [ZFA:0001187](0|0) (0|0|0)
- 1:   presumptive preglomerular region [ZFA:0005909](0|0) (0|0|0)
- 1:   presumptive pretectum proliferative zone [ZFA:0005908](0|0) (0|0|0)
- 1:   presumptive rhombomere 1 [ZFA:0001207](0|0) (0|0|0)
- 1:   presumptive rhombomere 2 [ZFA:0001208](0|0) (0|0|0)
- 1:   presumptive rhombomere 3 [ZFA:0001213](0|0) (0|0|0)
- 1:   presumptive rhombomere 4 [ZFA:0001212](0|0) (0|0|0)
- 1:   presumptive rhombomere 5 [ZFA:0001211](0|0) (0|0|0)
- 1:   presumptive rhombomere 6 [ZFA:0001210](0|0) (0|0|0)
- 1:   presumptive rhombomere 7 [ZFA:0001209](0|0) (0|0|0)
- 1:   presumptive rhombomere 8 [ZFA:0001214](0|0) (0|0|0)
- 1:   presumptive segmental plate [ZFA:0000053](0|0) (0|0|0)
- 1:   presumptive spinal cord [ZFA:0000417](0|0) (0|0|0)
- 1:   presumptive telencephalon [ZFA:0000571](0|0) (0|0|0)
- 1:   presumptive ventral entopeduncular nucleus [ZFA:0005910](0|0) (0|0|0)
- 1:   shield [ZFA:0000071](0|1) (1|0|0)
- 1:   swim bladder bud [ZFA:0005335](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Serine protease inhibitors0.003908Inherited
HMG-box0.1146Inherited
Nuclear receptor ligand-binding domain0.121Inherited
TPR-like0.1262Inherited
Homeodomain-like0.1855Inherited
SMAD/FHA domain0.2958Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transforming growth factor (TGF)-beta0.0003189Direct
T-box0.000852Direct
BCR-homology GTPase activation domain (BH-domain)0.002526Inherited
Homeodomain0.07742Inherited
Nuclear receptor0.08117Inherited
HMG-box0.09041Inherited
Nuclear receptor ligand-binding domain0.09492Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Serine protease inhibitors0.002527Inherited
HMG-box0.0928Inherited
Nuclear receptor ligand-binding domain0.0985Inherited
TPR-like0.1031Inherited
Homeodomain-like0.1571Inherited
SMAD/FHA domain0.2639Inherited

(show details)
Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.002527Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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