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Zebrafish Anatomy (ZA): primary germ layer

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + 2:   anatomical structure [ZFA:0000037] <16>(268|286) (268|153|73)
+ 1:   portion of tissue [ZFA:0001477] <232>(42|45) (47|31|19)
0:   primary germ layer [ZFA:0001122] <3>(6|4) (6|3|1)
- 1:   mesoderm [ZFA:0000041] <17>(1|1) (1|1|0)
- 1:   ectoderm [ZFA:0000016] <8>(5|3) (5|2|1)
- 1:   endoderm [ZFA:0000017] <3>(0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
p53-like transcription factors0.0002114Direct
Sema domain0.01697Inherited
Plexin repeat0.02314Inherited
SMAD/FHA domain0.05097Inherited
HMG-box0.06206Inherited
GTPase activation domain, GAP0.06553Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
T-box0.00006229Direct
Sema domain0.0135Inherited
Plexin repeat0.01833Inherited
HMG-box0.05385Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
p53-like transcription factors0.0001248Direct
Sema domain0.01184Inherited
Plexin repeat0.01646Inherited
SMAD/FHA domain0.03776Inherited
HMG-box0.04698Inherited
GTPase activation domain, GAP0.04984Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.01184Inherited
    81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.03732Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.05618Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.03732Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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