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Zebrafish Anatomy (ZA): organism subdivision

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   zebrafish anatomical entity [ZFA:0100000] <6>
+ 1:   anatomical structure [ZFA:0000037] <16>(275|296) (275|157|73)
+ 1:   whole organism [ZFA:0001094] <8>(272|295) (272|155|71)
0:   organism subdivision [ZFA:0001308] <10>(65|72) (71|48|27)
- 1:   surface structure [ZFA:0000292] <20>(8|7) (11|2|1)
- 1:   head [ZFA:0001114] <15>(27|34) (30|18|15)
- 1:   post-vent region [ZFA:0001117] <4>(7|8) (9|4|1)
- 1:   trunk [ZFA:0001115] <4>(6|8) (8|4|0)
- 1:   neuromere [ZFA:0001328] <2>(0|0) (0|0|0)
- 1:   axis [ZFA:0000092](0|0) (0|0|0)
- 1:   ball [ZFA:0000006](0|0) (0|0|0)
- 1:   caudal peduncle [ZFA:0000178](0|0) (0|0|0)
- 1:   extension [ZFA:0000106](1|0) (2|0|0)
- 1:   snout [ZFA:0005496](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
DUSP-like0Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0Direct
SMAD MH1 domain0Direct
Aquaporin-like0Direct
Retrovirus zinc finger-like domains0Direct
Smc hinge domain0Direct
Moesin tail domain0Direct
ADC-like0Direct
Connexin430Direct
Cap-Gly domain0Direct
CRAL/TRIO N-terminal domain0Direct
Tubulin nucleotide-binding domain-like0Direct
p53 tetramerization domain0Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0Direct
Translation proteins0Direct
Kazal-type serine protease inhibitors0Direct
Class II aaRS ABD-related0Direct
Class II aaRS and biotin synthetases0Direct
LDL receptor-like module0Direct
Rhodanese/Cell cycle control phosphatase0Direct
Cdc48 domain 2-like0Direct
Translation proteins SH3-like domain0Direct
Translational machinery components0Direct
Single hybrid motif0Direct
TATA-box binding protein-like0Direct
Nuclear receptor coactivator interlocking domain0Direct
LCCL domain0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
CCCH zinc finger0Direct
BRK domain-like0Direct
ENTH/VHS domain0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
Sec7 domain0Direct
Tricorn protease domain 20Direct
ACT-like0Direct
BPTI-like0Direct
Cullin repeat-like0Direct
Polo-box domain0Direct
Arginase/deacetylase0Direct
Metallo-dependent hydrolases0Direct
Aldolase0Direct
SNARE-like0Direct
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains0Direct
Glutathione synthetase ATP-binding domain-like0Direct
Tubulin C-terminal domain-like0Direct
CalX-like0Direct
Composite domain of metallo-dependent hydrolases0Direct
Class I glutamine amidotransferase-like0Direct
Nucleotide cyclase0Direct
Notch domain0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
HCP-like0Direct
DNase I-like0Direct
HSP20-like chaperones0Direct
Cysteine proteinases0.0007718Direct
Protein kinase-like (PK-like)0.08056Inherited
FnI-like domain0.1431Inherited
Nucleotide-diphospho-sugar transferases0.1752Inherited
WD40 repeat-like0.263Inherited
Alkaline phosphatase-like0.2862Inherited
Cytokine0.3058Inherited
NAD(P)-binding Rossmann-fold domains0.3738Inherited
Multidrug efflux transporter AcrB transmembrane domain0.4496Inherited
L domain-like0.6483Inherited
Concanavalin A-like lectins/glucanases0.9103Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
p53 tetramerization domain0Direct
Elongation factors0Direct
PWWP domain0Direct
Platelet-derived growth factor-like0Direct
CRAL/TRIO domain0Direct
Cdc48 domain 2-like0Direct
Hydantoinase (dihydropyrimidinase)0Direct
Retrovirus zinc finger-like domains0Direct
Sec7 domain0Direct
Aquaporin-like0Direct
Nitrogenase iron protein-like0Direct
Class I glutamine amidotransferases (GAT)0Direct
Biotinyl/lipoyl-carrier proteins and domains0Direct
FYVE, a phosphatidylinositol-3-phosphate binding domain0Direct
CalX-beta domain0Direct
LDL receptor-like module0Direct
V set domains (antibody variable domain-like)0Direct
Clathrin coat assembly domain0Direct
Adenylyl and guanylyl cyclase catalytic domain0Direct
Small Kunitz-type inhibitors & BPTI-like toxins0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Plakophilin 1 helical region0Direct
Cap-Gly domain0Direct
C5 cytosine-specific DNA methylase, DCM0Direct
Cell cycle control phosphatase, catalytic domain0Direct
Histone deacetylase, HDAC0Direct
Tubulin, GTPase domain0Direct
RUNT domain0Direct
Noncollagenous (NC1) domain of collagen IV0Direct
CCCH zinc finger0Direct
Phenylalanine metabolism regulatory domain0Direct
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains0Direct
Tubulin, C-terminal domain0Direct
LCCL domain0Direct
Connexin430Direct
Anticodon-binding domain of Class II aaRS0Direct
Proprotein convertase P-domain0Direct
p53 DNA-binding domain-like0Direct
Extracellular domain of cell surface receptors0Direct
CRAL/TRIO N-terminal domain0Direct
SMAD MH1 domain0Direct
SMAD domain0Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0Direct
Nuclear receptor coactivator interlocking domain0Direct
Zf-UBP0Direct
Chromo domain0Direct
Smc hinge domain0Direct
Hydantoinase (dihydropyrimidinase), catalytic domain0Direct
Moesin tail domain0Direct
DUSP, domain in ubiquitin-specific proteases0Direct
Myotubularin-like phosphatases0Direct
Prohormone convertase 1 pro-domain0Direct
Ubiquitin-related0Direct
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0Direct
Notch domain0Direct
Cdc48 N-terminal domain-like0Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0Direct
Ovomucoid domain III-like0Direct
Single strand DNA-binding domain, SSB0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
BRK domain-like0Direct
HMG-box0.000965Direct
Ubiquitin carboxyl-terminal hydrolase, UCH0.001283Inherited
T-box0.02243Inherited
Protein kinases, catalytic subunit0.07969Inherited
Tetratricopeptide repeat (TPR)0.2104Inherited
WD40-repeat0.2422Inherited
Short-chain cytokines0.253Inherited
Multidrug efflux transporter AcrB transmembrane domain0.253Inherited
Fibroblast growth factors (FGF)0.2715Inherited
VWC domain0.2715Inherited
Motor proteins0.6914Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Retrovirus zinc finger-like domains0Direct
HSP20-like chaperones0Direct
LDL receptor-like module0Direct
SMAD MH1 domain0Direct
BRK domain-like0Direct
Smc hinge domain0Direct
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains0Direct
Moesin tail domain0Direct
Translational machinery components0Direct
ENTH/VHS domain0Direct
Kazal-type serine protease inhibitors0Direct
BPTI-like0Direct
Arginase/deacetylase0Direct
DNase I-like0Direct
Aquaporin-like0Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0Direct
CalX-like0Direct
Translation proteins SH3-like domain0Direct
HCP-like0Direct
DUSP-like0Direct
Single hybrid motif0Direct
TATA-box binding protein-like0Direct
SNARE-like0Direct
ADC-like0Direct
CCCH zinc finger0Direct
Tubulin C-terminal domain-like0Direct
ACT-like0Direct
Nucleotide cyclase0Direct
Tricorn protease domain 20Direct
Composite domain of metallo-dependent hydrolases0Direct
Cullin repeat-like0Direct
p53 tetramerization domain0Direct
Class II aaRS ABD-related0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Cap-Gly domain0Direct
Glutathione synthetase ATP-binding domain-like0Direct
Translation proteins0Direct
Notch domain0Direct
Polo-box domain0Direct
Class I glutamine amidotransferase-like0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Class II aaRS and biotin synthetases0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
Aldolase0Direct
Tubulin nucleotide-binding domain-like0Direct
Cdc48 domain 2-like0Direct
Metallo-dependent hydrolases0Direct
Rhodanese/Cell cycle control phosphatase0Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0Direct
CRAL/TRIO N-terminal domain0Direct
Sec7 domain0Direct
Nuclear receptor coactivator interlocking domain0Direct
LCCL domain0Direct
Connexin430Direct
Cysteine proteinases0.0004699Direct
Growth factor receptor domain0.0008415Direct
HMG-box0.0009554Direct
vWA-like0.03717Inherited
Protein kinase-like (PK-like)0.06282Inherited
FnI-like domain0.1186Inherited
Nucleotide-diphospho-sugar transferases0.148Inherited
Cystine-knot cytokines0.1883Inherited
WD40 repeat-like0.2313Inherited
Alkaline phosphatase-like0.2539Inherited
Cytokine0.2734Inherited
NAD(P)-binding Rossmann-fold domains0.3391Inherited
UBA-like0.3881Inherited
Multidrug efflux transporter AcrB transmembrane domain0.4156Inherited
L domain-like0.621Inherited
Immunoglobulin0.763Inherited
Concanavalin A-like lectins/glucanases0.9023Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0Direct
    55550,55550
  • 55550 - SH2 domain
  • 55550 - SH2 domain
  • 0Direct
    48425,50729
  • 48425 - Sec7 domain
  • 50729 - PH domain-like
  • 0Direct
    52058,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0Direct
    81324,81324
  • 81324 - Voltage-gated potassium channels
  • 81324 - Voltage-gated potassium channels
  • 0Direct
    49785,57184
  • 49785 - Galactose-binding domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    50729,47473
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 0Direct
    90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0Direct
    47473,51695
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 0Direct
    57362,57362
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 0Direct
    46785,46785
  • 46785 - "Winged helix" DNA-binding domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    57196,63825
  • 57196 - EGF/Laminin
  • 63825 - YWTD domain
  • 0Direct
    141072,141072
  • 141072 - CalX-like
  • 141072 - CalX-like
  • 0Direct
    53300,53300
  • 53300 - vWA-like
  • 53300 - vWA-like
  • 0Direct
    46938,52087
  • 46938 - CRAL/TRIO N-terminal domain
  • 52087 - CRAL/TRIO domain
  • 0Direct
    55021,56534
  • 55021 - ACT-like
  • 56534 - Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
  • 0Direct
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0Direct
    57196,49899
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    57903,47370
  • 57903 - FYVE/PHD zinc finger
  • 47370 - Bromodomain
  • 0Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0Direct
    57184,57603
  • 57184 - Growth factor receptor domain
  • 57603 - FnI-like domain
  • 0Direct
    54001,143791
  • 54001 - Cysteine proteinases
  • 143791 - DUSP-like
  • 0Direct
    50978,50998
  • 50978 - WD40 repeat-like
  • 50998 - Quinoprotein alcohol dehydrogenase-like
  • 0Direct
    50156,50044
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 0Direct
    54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0Direct
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0Direct
    51556,51338
  • 51556 - Metallo-dependent hydrolases
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 0Direct
    90257,57997
  • 90257 - Myosin rod fragments
  • 57997 - Tropomyosin
  • 0Direct
    63825,57196
  • 63825 - YWTD domain
  • 57196 - EGF/Laminin
  • 0Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    49854,57196
  • 49854 - Spermadhesin, CUB domain
  • 57196 - EGF/Laminin
  • 0Direct
    50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0Direct
    49417,47719
  • 49417 - p53-like transcription factors
  • 47719 - p53 tetramerization domain
  • 0Direct
    57850,57850
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 0Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0Direct
    57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0Direct
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    48452,81901
  • 48452 - TPR-like
  • 81901 - HCP-like
  • 0Direct
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.3359Inherited
    57196,49854
  • 57196 - EGF/Laminin
  • 49854 - Spermadhesin, CUB domain
  • 0.3359Inherited
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.641Inherited
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.705Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50729,47473,51695
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 0Direct
    57196,63825,57196
  • 57196 - EGF/Laminin
  • 63825 - YWTD domain
  • 57196 - EGF/Laminin
  • 0Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0Direct
    57196,57184,57196
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0Direct
    57184,57184,57196
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0Direct
    57196,49899,49899
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    49854,57196,49854
  • 49854 - Spermadhesin, CUB domain
  • 57196 - EGF/Laminin
  • 49854 - Spermadhesin, CUB domain
  • 0Direct
    57196,57196,90193
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    90193,90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0Direct
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0Direct
    52743,49785,57184
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    57184,57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0Direct
    50156,50044,52540
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54897,52743,49785
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0Direct
    57850,57850,57850
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 0Direct
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    75399,75399,75399
  • 75399 - Plakin repeat
  • 75399 - Plakin repeat
  • 75399 - Plakin repeat
  • 0Direct
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0Direct
    47031,50729,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 50729 - PH domain-like
  • 0Direct
    57184,52058,49265
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    57196,90193,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0Direct
    52058,49265,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0Direct
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.5066Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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