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Zebrafish Anatomy (ZA): white matter

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   whole organism [ZFA:0001094] <8>(272|295) (272|155|71)
+ + + + 4:   anatomical group [ZFA:0001512] <5>(178|208) (181|127|60)
+ + + 3:   anatomical system [ZFA:0001439] <18>(164|193) (168|119|58)
+ + + 3:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + 2:   nervous system [ZFA:0000396] <9>(56|58) (60|32|17)
+ + 2:   anatomical structure [ZFA:0000037] <16>(275|296) (275|157|73)
+ 1:   central nervous system [ZFA:0000012] <10>(27|27) (30|13|9)
+ 1:   multi-tissue structure [ZFA:0001488] <202>(69|77) (72|47|23)
0:   white matter [ZFA:0001682] <23>(4|3) (4|3|3)
- 1:   diencephalic white matter [ZFA:0000338] <17>(2|1) (2|1|1)
- 1:   brainstem and spinal white matter [ZFA:0000318] <10>(2|2) (2|2|2)
- 1:   telencephalic white matter [ZFA:0000597] <5>(0|0) (0|0|0)
- 1:   cerebellar white matter [ZFA:0001708] <3>(0|0) (0|0|0)
- 1:   lateral forebrain bundle [ZFA:0007012] <2>(0|0) (0|0|0)
- 1:   medial forebrain bundle [ZFA:0005111] <2>(0|0) (0|0|0)
- 1:   rostral cerebellar tract [ZFA:0000643] <2>(0|0) (0|0|0)
- 1:   anterior catecholaminergic tract [ZFA:0005342](0|0) (0|0|0)
- 1:   decussation of medial funicular nucleus [ZFA:0000493](0|0) (0|0|0)
- 1:   endohypothalamic tract [ZFA:0005343](0|0) (0|0|0)
- 1:   hindbrain commissure [ZFA:0001692](0|0) (0|0|0)
- 1:   intertectal commissure [ZFA:0000684](0|0) (0|0|0)
- 1:   medial longitudinal catecholaminergic tract [ZFA:0005341](0|0) (0|0|0)
- 1:   preopticohypophyseal tract [ZFA:0005789](0|0) (0|0|0)
- 1:   preopticohypothalamic tract [ZFA:0005344](0|0) (0|0|0)
- 1:   retinotectal tract [ZFA:0005864](0|0) (0|0|0)
- 1:   rostral mesencephalo-cerebellar tract [ZFA:0000579](0|0) (0|0|0)
- 1:   secondary gustatory tract [ZFA:0000430](0|0) (0|0|0)
- 1:   supraoptic tract [ZFA:0001657](0|0) (0|0|0)
- 1:   tract of the caudal commissure [ZFA:0005452](0|0) (0|0|0)
- 1:   tract of the commissure of the caudal tuberculum [ZFA:0005875](0|0) (0|0|0)
- 1:   tract of the postoptic commissure [ZFA:0001366](0|0) (0|0|0)
- 1:   ventral rhombencephalic commissure medulla oblongata [ZFA:0000985](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Fibronectin type III0.000001596Direct
Immunoglobulin0.0003033Direct
Cadherin-like0.0005594Direct
Cyclin-like0.009392Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Fibronectin type III0.0000007574Direct
I set domains0.00001297Direct
Cadherin0.0002324Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Fibronectin type III0.0000009038Direct
Immunoglobulin0.0001802Direct
Cadherin-like0.0003373Direct
Cyclin-like0.006295Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.000000003766Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.000009382Direct
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.0001704Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0000000000835Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.000001028Direct
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.0001152Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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