SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Zebrafish Anatomy (ZA): muscle

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   anatomical group [ZFA:0001512] <5>(178|208) (181|127|60)
+ + + 3:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + 3:   whole organism [ZFA:0001094] <8>(272|295) (272|155|71)
+ + 2:   anatomical structure [ZFA:0000037] <16>(275|296) (275|157|73)
+ + 2:   anatomical system [ZFA:0001439] <18>(164|193) (168|119|58)
+ 1:   portion of tissue [ZFA:0001477] <232>(42|51) (48|34|23)
+ 1:   musculature system [ZFA:0000548] <5>(11|14) (12|13|9)
0:   muscle [ZFA:0005145] <31>(8|11) (9|11|8)
- 1:   myotome [ZFA:0001056] <33>(3|3) (3|3|1)
- 1:   epaxial myotome region [ZFA:0001084] <30>(0|0) (0|0|0)
- 1:   hypaxial myotome region [ZFA:0001085] <30>(0|0) (0|0|0)
- 1:   skeletal muscle [ZFA:0005277] <15>(6|7) (6|6|5)
- 1:   cardiac muscle [ZFA:0005280] <5>(0|0) (0|0|0)
- 1:   smooth muscle [ZFA:0005274] <5>(0|0) (0|0|0)
- 1:   head muscle [ZFA:0001652] <3>(0|0) (0|0|0)
- 1:   muscle cell [ZFA:0009114] <3>(8|10) (9|7|5)
- 1:   hypural muscle [ZFA:0000902] <1>(0|0) (0|0|0)
- 1:   anal protractor [ZFA:0005897](0|0) (0|0|0)
- 1:   anal retractor [ZFA:0005896](0|0) (0|0|0)
- 1:   coracoradialis [ZFA:0000492](0|0) (0|0|0)
- 1:   dorsal fin protractor [ZFA:0005816](0|0) (0|0|0)
- 1:   dorsal fin retractor [ZFA:0005817](0|0) (0|0|0)
- 1:   dorsal oblique extraocular muscle [ZFA:0000738](0|0) (0|0|0)
- 1:   dorsal rectus [ZFA:0000345](0|0) (0|0|0)
- 1:   esophageal striated muscle [ZFA:0005785](0|0) (0|0|0)
- 1:   hypaxialis [ZFA:0000362](0|0) (0|0|0)
- 1:   infracarinalis [ZFA:0000216](0|0) (0|0|0)
- 1:   interradialis caudalis [ZFA:0000528](0|0) (0|0|0)
- 1:   lateral rectus [ZFA:0000383](0|0) (0|0|0)
- 1:   longitudinal hypochordal [ZFA:0000230](0|0) (0|0|0)
- 1:   medial rectus [ZFA:0000301](0|0) (0|0|0)
- 1:   pectoral protractor [ZFA:0005863](0|0) (0|0|0)
- 1:   pericardial muscle [ZFA:0001653](0|0) (0|0|0)
- 1:   superficial lateralis [ZFA:0000286](0|0) (0|0|0)
- 1:   supracarinalis [ZFA:0000288](0|0) (0|0|0)
- 1:   ventral intermandibularis anterior [ZFA:0007008](0|0) (0|0|0)
- 1:   ventral intermandibularis posterior [ZFA:0007048](0|0) (0|0|0)
- 1:   ventral oblique extraocular muscle [ZFA:0000861](0|0) (0|0|0)
- 1:   ventral rectus [ZFA:0000457](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Troponin coil-coiled subunits0.00001005Direct
GroEL-intermediate domain like0.001938Inherited
Multidrug efflux transporter AcrB transmembrane domain0.006735Inherited
Myosin rod fragments0.008788Inherited
IP3 receptor type 1 binding core, domain 20.02107Inherited
GroEL apical domain-like0.02216Inherited
GroEL equatorial domain-like0.04318Inherited
MIR domain0.06043Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Troponin T0Direct
Myotubularin-like phosphatases0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00004185Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.0002855Direct
L domain0.0003343Direct
Group II chaperonin (CCT, TRIC), apical domain0.001249Inherited
Myosin rod fragments0.005856Inherited
WW domain0.01187Inherited
Multidrug efflux transporter AcrB transmembrane domain0.01503Inherited
MIR domain0.04698Inherited
Laminin-type module0.05591Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Troponin coil-coiled subunits0.000005714Direct
GroEL-intermediate domain like0.001221Inherited
Multidrug efflux transporter AcrB transmembrane domain0.004449Inherited
Myosin rod fragments0.005894Inherited
WW domain0.01201Inherited
IP3 receptor type 1 binding core, domain 20.01489Inherited
GroEL apical domain-like0.01575Inherited
GroEL equatorial domain-like0.03188Inherited
MIR domain0.04595Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52058,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    100909,49899
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    82109,82109
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 0Direct
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.0003276Direct
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0003276Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001221Inherited
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.001221Inherited
    82109,100909
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0.01489Inherited
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.01489Inherited
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.03919Inherited
    53300,53300
  • 53300 - vWA-like
  • 53300 - vWA-like
  • 0.04595Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    82109,100909,49899
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    82109,82109,100909
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0Direct
    57184,52058,49265
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    52058,49265,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0Direct
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0003276Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001221Inherited
    48726,49265,48726
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.01489Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.02534Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)