SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Zebrafish Anatomy (ZA): skeletal muscle

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + + 4:   anatomical group [ZFA:0001512] <5>(171|201) (175|125|60)
+ + + + 4:   whole organism [ZFA:0001094] <8>(265|285) (265|151|71)
+ + + 3:   anatomical structure [ZFA:0000037] <16>(268|286) (268|153|73)
+ + + 3:   anatomical system [ZFA:0001439] <18>(158|189) (163|119|58)
+ + 2:   portion of tissue [ZFA:0001477] <232>(42|45) (47|31|19)
+ + 2:   musculature system [ZFA:0000548] <5>(9|12) (11|9|6)
+ 1:   muscle [ZFA:0005145] <31>(8|11) (10|8|5)
0:   skeletal muscle [ZFA:0005277] <15>(6|8) (7|6|5)
- 1:   adductor muscle [ZFA:0005268] <7>(0|0) (0|0|0)
- 1:   abductor muscle [ZFA:0005269] <5>(0|0) (0|0|0)
- 1:   arrector muscle [ZFA:0005275] <4>(0|0) (0|0|0)
- 1:   flexor muscle [ZFA:0005271] <4>(0|0) (0|0|0)
- 1:   depressor muscle [ZFA:0005270] <2>(0|0) (0|0|0)
- 1:   erector muscle [ZFA:0005267] <2>(0|0) (0|0|0)
- 1:   inclinator muscle [ZFA:0005276] <2>(0|0) (0|0|0)
- 1:   skeletal muscle cell [ZFA:0009115] <2>(6|6) (6|6|5)
- 1:   deep lateral dorsal muscle [ZFA:0005825](0|0) (0|0|0)
- 1:   deep lateral ventral muscle [ZFA:0005824](0|0) (0|0|0)
- 1:   dorsal interfilamental caudal muscle [ZFA:0005822](0|0) (0|0|0)
- 1:   epaxialis [ZFA:0000349](0|0) (0|0|0)
- 1:   external lateral dorsal muscle [ZFA:0005823](0|0) (0|0|0)
- 1:   external lateral ventral muscle [ZFA:0000205](0|0) (0|0|0)
- 1:   ventral interfilamental caudal muscle [ZFA:0005821](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
GroEL-intermediate domain like0.000004432Direct
GroEL apical domain-like0.00004564Direct
GroEL equatorial domain-like0.0001048Direct
IP3 receptor type 1 binding core, domain 20.0001549Direct
Multidrug efflux transporter AcrB transmembrane domain0.0001818Direct
MIR domain0.001739Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Myotubularin-like phosphatases0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000003525Direct
Group II chaperonin (CCT, TRIC), apical domain0.000002308Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.00000566Direct
Multidrug efflux transporter AcrB transmembrane domain0.0003867Direct
Kelch motif0.0009111Direct
MIR domain0.001041Inherited
Laminin-type module0.242Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GroEL-intermediate domain like0.000002505Direct
GroEL apical domain-like0.00002621Direct
GroEL equatorial domain-like0.00006094Direct
IP3 receptor type 1 binding core, domain 20.0000905Direct
Multidrug efflux transporter AcrB transmembrane domain0.0001068Direct
Kelch motif0.000986Direct
MIR domain0.001089Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
82109,82109
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 0Direct
    100909,49899
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.000002505Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000002505Direct
    82109,100909
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0.0000905Direct
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.0000905Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    82109,100909,49899
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    82109,82109,100909
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000002505Direct
    48726,49265,48726
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.0000905Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.03079Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)