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Zebrafish Anatomy (ZA): skeletal element

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + 3:   anatomical group [ZFA:0001512] <5>(171|201) (175|125|60)
+ + 2:   whole organism [ZFA:0001094] <8>(265|285) (265|151|71)
+ + 2:   anatomical system [ZFA:0001439] <18>(158|189) (163|119|58)
+ + 2:   anatomical structure [ZFA:0000037] <16>(268|286) (268|153|73)
+ 1:   compound organ [ZFA:0000496] <12>(97|108) (101|75|33)
+ 1:   skeletal system [ZFA:0000434] <6>(9|9) (12|4|3)
0:   skeletal element [ZFA:0005494] <6>(7|6) (9|2|3)
- 1:   actinotrichium [ZFA:0005435] <5>(0|0) (0|0|0)
- 1:   cartilage element [ZFA:0001501] <5>(4|3) (5|0|1)
- 1:   bone element [ZFA:0001514] <3>(4|3) (4|2|2)
- 1:   endochondral element [ZFA:0005620] <1>(1|2) (1|0|0)
- 1:   replacement element [ZFA:0005624] <1>(2|2) (2|0|0)
- 1:   lepidotrichium segment [ZFA:0005633](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Cysteine proteinases0.00002497Direct
FnI-like domain0.00009922Direct
Cytokine0.001476Inherited
Alkaline phosphatase-like0.006446Inherited
Multidrug efflux transporter AcrB transmembrane domain0.02676Inherited
Growth factor receptor domain0.05601Inherited
HMG-box0.1549Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Ubiquitin carboxyl-terminal hydrolase, UCH0.00006826Direct
Fibroblast growth factors (FGF)0.001263Inherited
Multidrug efflux transporter AcrB transmembrane domain0.005265Inherited
Zf-UBP0.007648Inherited
VWC domain0.01553Inherited
HMG-box0.1525Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cysteine proteinases0.00001423Direct
FnI-like domain0.00005759Direct
Cytokine0.0009146Direct
Nucleotide-diphospho-sugar transferases0.0009586Direct
Alkaline phosphatase-like0.004238Inherited
Multidrug efflux transporter AcrB transmembrane domain0.01918Inherited
Growth factor receptor domain0.04197Inherited
UBA-like0.08436Inherited
HMG-box0.129Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.02237Inherited
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.02237Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57184,57196
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.005939Inherited
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.02237Inherited
    69179,69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.02237Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)