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Zebrafish Anatomy (ZA): striated muscle cell

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Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + + + 5:   anatomical group [ZFA:0001512] <5>(171|201) (175|125|60)
+ + + + + 5:   whole organism [ZFA:0001094] <8>(265|285) (265|151|71)
+ + + + 4:   cell [ZFA:0009000] <89>(53|68) (55|34|21)
+ + + + 4:   anatomical system [ZFA:0001439] <18>(158|189) (163|119|58)
+ + + + 4:   anatomical structure [ZFA:0000037] <16>(268|286) (268|153|73)
+ + + 3:   musculature system [ZFA:0000548] <5>(9|12) (11|9|6)
+ + + 3:   electrically active cell [ZFA:0009128] <2>(16|20) (17|13|6)
+ + + 3:   portion of tissue [ZFA:0001477] <232>(42|45) (47|31|19)
+ + 2:   electrically responsive cell [ZFA:0009190] <3>(14|17) (15|11|6)
+ + 2:   muscle [ZFA:0005145] <31>(8|11) (10|8|5)
+ 1:   muscle cell [ZFA:0009114] <3>(8|10) (9|7|5)
0:   striated muscle cell [ZFA:0005784] <2>(7|8) (8|6|5)
- 1:   skeletal muscle cell [ZFA:0009115] <2>(6|6) (6|6|5)
- 1:   cardiac muscle cell [ZFA:0009316](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Troponin coil-coiled subunits0.0000002557Direct
GroEL-intermediate domain like0.00001969Direct
GroEL apical domain-like0.0001887Direct
IP3 receptor type 1 binding core, domain 20.0004046Direct
GroEL equatorial domain-like0.0004186Direct
Multidrug efflux transporter AcrB transmembrane domain0.0005833Direct
MIR domain0.004218Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Troponin T0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.000001855Direct
Group II chaperonin (CCT, TRIC), apical domain0.00001176Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.00002213Direct
WW domain0.0009111Direct
Multidrug efflux transporter AcrB transmembrane domain0.00109Inherited
MIR domain0.002801Inherited
Laminin-type module0.022Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Troponin coil-coiled subunits0.000000144Direct
GroEL-intermediate domain like0.00001121Direct
GroEL apical domain-like0.0001111Direct
IP3 receptor type 1 binding core, domain 20.000242Direct
GroEL equatorial domain-like0.0002506Direct
Multidrug efflux transporter AcrB transmembrane domain0.0003528Direct
WW domain0.0008993Direct
MIR domain0.002745Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
82109,82109
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 0Direct
    100909,49899
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00001121Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00001121Direct
    82109,100909
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0.000242Direct
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.000242Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    82109,100909,49899
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    82109,82109,100909
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00001121Direct
    48726,49265,48726
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.000242Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.007038Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)