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Zebrafish Anatomy (ZA): muscle cell

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + + 4:   whole organism [ZFA:0001094] <8>(265|285) (265|151|71)
+ + + + 4:   anatomical group [ZFA:0001512] <5>(171|201) (175|125|60)
+ + + 3:   anatomical system [ZFA:0001439] <18>(158|189) (163|119|58)
+ + + 3:   anatomical structure [ZFA:0000037] <16>(268|286) (268|153|73)
+ + + 3:   cell [ZFA:0009000] <89>(53|68) (55|34|21)
+ + 2:   portion of tissue [ZFA:0001477] <232>(42|45) (47|31|19)
+ + 2:   electrically active cell [ZFA:0009128] <2>(16|20) (17|13|6)
+ + 2:   musculature system [ZFA:0000548] <5>(9|12) (11|9|6)
+ 1:   muscle [ZFA:0005145] <31>(8|11) (10|8|5)
+ 1:   electrically responsive cell [ZFA:0009190] <3>(14|17) (15|11|6)
0:   muscle cell [ZFA:0009114] <3>(8|10) (9|7|5)
- 1:   muscle pioneer [ZFA:0001086] <30>(0|0) (0|0|0)
- 1:   smooth muscle cell [ZFA:0009118] <2>(0|0) (0|0|0)
- 1:   striated muscle cell [ZFA:0005784] <2>(7|8) (8|6|5)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Troponin coil-coiled subunits0.0000006145Direct
GroEL-intermediate domain like0.00004068Direct
Myosin rod fragments0.0001315Direct
GroEL apical domain-like0.0003736Direct
IP3 receptor type 1 binding core, domain 20.0006456Direct
GroEL equatorial domain-like0.0008201Direct
MIR domain0.006494Inherited
Multidrug efflux transporter AcrB transmembrane domain0.0152Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Troponin T0Direct
Myotubularin-like phosphatases0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.000003881Direct
Group II chaperonin (CCT, TRIC), apical domain0.00002402Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.00004045Direct
Myosin rod fragments0.00007709Direct
WW domain0.00172Inherited
MIR domain0.004328Inherited
Multidrug efflux transporter AcrB transmembrane domain0.02926Inherited
Laminin-type module0.2362Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Troponin coil-coiled subunits0.0000003463Direct
GroEL-intermediate domain like0.00002332Direct
Myosin rod fragments0.00007666Direct
GroEL apical domain-like0.0002232Direct
IP3 receptor type 1 binding core, domain 20.0003915Direct
GroEL equatorial domain-like0.000499Direct
WW domain0.001716Inherited
MIR domain0.004276Inherited
Multidrug efflux transporter AcrB transmembrane domain0.01053Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
82109,82109
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 0Direct
    100909,49899
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00002332Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00002332Direct
    82109,100909
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0.0003915Direct
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.0003915Direct
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.0006317Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    82109,100909,49899
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    82109,82109,100909
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00002332Direct
    48726,49265,48726
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.0003915Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.2282Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)