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Zebrafish Anatomy (ZA): muscle cell

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + + 4:   anatomical group [ZFA:0001512] <5>(178|208) (181|127|60)
+ + + + 4:   whole organism [ZFA:0001094] <8>(272|295) (272|155|71)
+ + + 3:   cell [ZFA:0009000] <89>(49|68) (55|35|22)
+ + + 3:   anatomical structure [ZFA:0000037] <16>(275|296) (275|157|73)
+ + + 3:   anatomical system [ZFA:0001439] <18>(164|193) (168|119|58)
+ + 2:   portion of tissue [ZFA:0001477] <232>(42|51) (48|34|23)
+ + 2:   musculature system [ZFA:0000548] <5>(11|14) (12|13|9)
+ + 2:   electrically active cell [ZFA:0009128] <2>(15|20) (17|14|7)
+ 1:   electrically responsive cell [ZFA:0009190] <3>(14|18) (16|13|7)
+ 1:   muscle [ZFA:0005145] <31>(8|11) (9|11|8)
0:   muscle cell [ZFA:0009114] <3>(8|10) (9|7|5)
- 1:   muscle pioneer [ZFA:0001086] <30>(0|0) (0|0|0)
- 1:   smooth muscle cell [ZFA:0009118] <2>(0|0) (0|0|0)
- 1:   striated muscle cell [ZFA:0005784] <2>(7|8) (8|6|5)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Troponin coil-coiled subunits0.0000006252Direct
GroEL-intermediate domain like0.0000414Direct
Myosin rod fragments0.0001345Direct
GroEL apical domain-like0.000382Direct
IP3 receptor type 1 binding core, domain 20.0006598Direct
GroEL equatorial domain-like0.0008339Direct
MIR domain0.006622Inherited
Multidrug efflux transporter AcrB transmembrane domain0.0149Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Troponin T0Direct
Myotubularin-like phosphatases0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.000004078Direct
Group II chaperonin (CCT, TRIC), apical domain0.00002547Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.00004256Direct
Myosin rod fragments0.00008176Direct
WW domain0.001802Inherited
MIR domain0.00449Inherited
Multidrug efflux transporter AcrB transmembrane domain0.0284Inherited
Laminin-type module0.2319Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Troponin coil-coiled subunits0.0000003542Direct
GroEL-intermediate domain like0.00002385Direct
Myosin rod fragments0.00007849Direct
GroEL apical domain-like0.0002282Direct
IP3 receptor type 1 binding core, domain 20.0003994Direct
GroEL equatorial domain-like0.0005075Direct
WW domain0.001744Inherited
MIR domain0.004363Inherited
Multidrug efflux transporter AcrB transmembrane domain0.01027Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
100909,49899
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    82109,82109
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 0Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00002385Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00002385Direct
    82109,100909
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0.0003994Direct
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.0003994Direct
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.0006432Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    82109,100909,49899
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    82109,82109,100909
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00002385Direct
    48726,49265,48726
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.0003994Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.2227Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)