SUPERFAMILY 1.75 HMM library and genome assignments server

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Kelch motif family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All beta proteins [ 48724] (174)
Fold:   6-bladed beta-propeller [ 50938] (11)
Superfamily:   Kelch motif [ 117281]
Family:   Kelch motif [ 117282]


Family statistics
Genomes (238) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 3,172 8,662 4
Proteins 3,041 8,300 4


Enzyme Commission (EC)

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show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Isomerases0Least InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0InformativeDirect

Document: EC annotation of SCOP domains

Human Phenotype (HP)

(show details)
HP termFDR (all)SDHP levelAnnotation (direct or inherited)
Phenotypic Abnormality (PA)Abnormality of nervous system morphology0.1269Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the musculature0.1946Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the face0.542Least InformativeInherited
Phenotypic Abnormality (PA)Abnormal peripheral nervous system morphology0.03529Moderately InformativeInherited
Phenotypic Abnormality (PA)Abnormal skeletal muscle morphology0.03964Moderately InformativeInherited
Phenotypic Abnormality (PA)Abnormality of prenatal development or birth0.07376InformativeInherited
Phenotypic Abnormality (PA)Breech presentation0.00001863Highly InformativeDirect
Phenotypic Abnormality (PA)Muscle fiber inclusion bodies0.00007077Highly InformativeDirect
Phenotypic Abnormality (PA)Abnormality of facial musculature0.01196Highly InformativeInherited
Phenotypic Abnormality (PA)Decreased fetal movement0.0132Highly InformativeInherited

Document: HP annotation of SCOP domains

Worm Phenotype (WP)

(show details) Document: WP annotation of SCOP domains

Fly Anatomy (FA)

(show details) Document: FA annotation of SCOP domains

Zebrafish Anatomy (ZA)

(show details)
ZA termFDR (all)SDZA levelAnnotation (direct or inherited)
Zebrafish Anatomy (ZA)portion of tissue0.0673Moderately InformativeInherited
Zebrafish Anatomy (ZA)skeletal muscle0.0009111InformativeDirect

Document: ZA annotation of SCOP domains

Xenopus Anatomy (XA)

(show details) Document: XA annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Isomerases0Moderately InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0InformativeDirect
Enzyme Commission (EC)Acting on carbohydrates and derivatives0Highly InformativeDirect

Document: EC annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Human Phenotype (HP) · Worm Phenotype (WP) · Fly Anatomy (FA) · Zebrafish Anatomy (ZA) · Xenopus Anatomy (XA) · Enzyme Commission (EC) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 4 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Kelch motif domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Human Phenotype (HP) · Worm Phenotype (WP) · Fly Anatomy (FA) · Zebrafish Anatomy (ZA) · Xenopus Anatomy (XA) · Enzyme Commission (EC) · Internal database links ]