SUPERFAMILY 1.75 HMM library and genome assignments server

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MAM domain family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All beta proteins [ 48724] (174)
Fold:   Concanavalin A-like lectins/glucanases [ 49898]
Superfamily:   Concanavalin A-like lectins/glucanases [ 49899] (25)
Family:   MAM domain [ 141170]


Family statistics
Genomes (66) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 353 1,119 1
Proteins 353 1,119 1


Enzyme Commission (EC)

(
show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Acting on peptide bonds (peptide hydrolases)0.0001296Least InformativeDirect
Enzyme Commission (EC)Acting on ester bonds0.007596Least InformativeInherited
Enzyme Commission (EC)Phosphoric monoester hydrolases0.00000000000001969Moderately InformativeDirect
Enzyme Commission (EC)Protein-tyrosine-phosphatase0InformativeDirect
Enzyme Commission (EC)Metalloendopeptidases0.000001251InformativeDirect

Document: EC annotation of SCOP domains

Mouse Phenotype (MP)

(show details)
MP termFDR (all)SDMP levelAnnotation (direct or inherited)
Mammalian Phenotype (MP)cellular phenotype0.8046Least InformativeInherited
Mammalian Phenotype (MP)nervous system phenotype0.886Least InformativeInherited
Mammalian Phenotype (MP)abnormal cell migration0.03993InformativeInherited
Mammalian Phenotype (MP)abnormal neuron physiology0.06642InformativeInherited
Mammalian Phenotype (MP)abnormal neuronal migration0.0008215Highly InformativeDirect

Document: MP annotation of SCOP domains

Fly Phenotype (FP)

(show details)
FP termFDR (all)SDFP levelAnnotation (direct or inherited)
Fly Phenotype (FP)increased mortality0Least InformativeDirect

Document: FP annotation of SCOP domains

Xenopus Anatomy (XA)

(show details) Document: XA annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Hydrolases0.000000000000004357Least InformativeDirect
Enzyme Commission (EC)Acting on peptide bonds (peptidases)0.0002097Moderately InformativeDirect
Enzyme Commission (EC)Acting on ester bonds0.01573Moderately InformativeInherited
Enzyme Commission (EC)Phosphoric monoester hydrolases0.0000000000000162InformativeDirect
Enzyme Commission (EC)Serine endopeptidases0.2113InformativeInherited
Enzyme Commission (EC)Protein-tyrosine-phosphatase0Highly InformativeDirect
Enzyme Commission (EC)Metalloendopeptidases0.0000006473Highly InformativeDirect

Document: EC annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Mouse Phenotype (MP) · Fly Phenotype (FP) · Xenopus Anatomy (XA) · Enzyme Commission (EC) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 253 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Concanavalin A-like lectins/glucanases domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Mouse Phenotype (MP) · Fly Phenotype (FP) · Xenopus Anatomy (XA) · Enzyme Commission (EC) · Internal database links ]