SUPERFAMILY 1.75 HMM library and genome assignments server

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DNA/RNA-binding 3-helical bundle fold

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All alpha proteins [ 46456] (284)
Fold:   DNA/RNA-binding 3-helical bundle [ 46688] (14)
Superfamilies:   Homeodomain-like [ 46689] (19)
  Methylated DNA-protein cysteine methyltransferase, C-terminal domain [ 46767]
  ARID-like [ 46774]
  "Winged helix" DNA-binding domain [ 46785] (84)
  C-terminal effector domain of the bipartite response regulators [ 46894] (3)
  TrpR-like [ 48295] (3)
  Ribosomal protein L11, C-terminal domain [ 46906]
  Ribosomal protein S18 [ 46911]
  Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 [ 46915]
  N-terminal Zn binding domain of HIV integrase [ 46919]
  RNA polymerase subunit RPB10 [ 46924]
  Sigma3 and sigma4 domains of RNA polymerase sigma factors [ 88659] (3)
  KorB DNA-binding domain-like [ 109709]
  Rps17e-like [ 116820]