SUPERFAMILY 1.75 HMM library and genome assignments server

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Peptidyl carrier domain family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All alpha proteins [ 46456] (284)
Fold:   Acyl carrier protein-like [ 47335] (3)
Superfamily:   ACP-like [ 47336] (3)
Family:   Peptidyl carrier domain [ 47342]


Family statistics
Genomes (0) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 0 5 2
Proteins 0 5 2


Enzyme Commission (EC)

(
show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Isomerases0.000006142Least InformativeDirect
Enzyme Commission (EC)Ligases0.02087Least InformativeInherited
Enzyme Commission (EC)Forming carbon-nitrogen bonds0.0001432Moderately InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.000000000003056InformativeDirect
Enzyme Commission (EC)Acid--D-amino-acid ligases (peptide synthases)0.0000005075InformativeDirect
Enzyme Commission (EC)Acting on amino acids and derivatives0.00000000000004571Highly InformativeDirect

Document: EC annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Oxidoreductases0.06Least InformativeInherited
Enzyme Commission (EC)Isomerases0.000005087Moderately InformativeDirect
Enzyme Commission (EC)Ligases0.01592Moderately InformativeInherited
Enzyme Commission (EC)Racemases and epimerases0.000000000004538InformativeDirect
Enzyme Commission (EC)Acting on the aldehyde or oxo group of donors0.000008118InformativeDirect
Enzyme Commission (EC)Forming carbon-nitrogen bonds0.0001942InformativeDirect
Enzyme Commission (EC)Acting on amino acids and derivatives0.00000000000003968Highly InformativeDirect
Enzyme Commission (EC)Acid--amino-acid ligases (peptide synthases)0.0000003077Highly InformativeDirect
Enzyme Commission (EC)With NAD(+) or NADP(+) as acceptor0.000004463Highly InformativeDirect

Document: EC annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Enzyme Commission (EC) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 30 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a ACP-like domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Enzyme Commission (EC) · Internal database links ]