SUPERFAMILY 1.75 HMM library and genome assignments server

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Serralysin-like metalloprotease, C-terminal domain family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All beta proteins [ 48724] (174)
Fold:   Single-stranded right-handed beta-helix [ 51125] (8)
Superfamily:   beta-Roll [ 51120]
Family:   Serralysin-like metalloprotease, C-terminal domain [ 51121]


Family statistics
Genomes (117) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 163 1,936 13
Proteins 161 1,893 13


Enzyme Commission (EC)

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show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Acting on peptide bonds (peptide hydrolases)0.000000001261Least InformativeDirect
Enzyme Commission (EC)Metalloendopeptidases0InformativeDirect

Document: EC annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Hydrolases0.000004685Least InformativeDirect
Enzyme Commission (EC)Acting on peptide bonds (peptidases)0.000000002477Moderately InformativeDirect
Enzyme Commission (EC)Isomerases0.0001215Moderately InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.0000000001552InformativeDirect
Enzyme Commission (EC)Metalloendopeptidases0Highly InformativeDirect
Enzyme Commission (EC)Acting on carbohydrates and derivatives0.000000000000008322Highly InformativeDirect

Document: EC annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Enzyme Commission (EC) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 5 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a beta-Roll domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Enzyme Commission (EC) · Internal database links ]