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Carbamoyl phosphate synthetase, small subunit N-terminal domain superfamily
SCOP classification
Superfamily statistics
Functional annotation
| General category | Metabolism |
| Detailed category | Coenzyme metabolism and transport |
Function annotation of SCOP domain superfamilies
InterPro annotation
| Cross references | IPR002474 SSF52021 Protein matches |
| Abstract | The carbamoyl-phosphate synthase domain is in the N terminus of the
protein.
Carbamoyl-phosphate synthase catalyses the ATP-dependent synthesis of
carbamoyl-phosphate from glutamine or ammonia and bicarbonate. This
important enzyme initiates both the urea cycle and the biosynthesis
of arginine and/or pyrimidines [ 1972379].
The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a
heterodimer of a small and large chain. The small chain promotes
the hydrolysis of glutamine to ammonia, which is used by the large
chain to synthesize carbamoyl phosphate. |
InterPro database
PDBeMotif information about ligands, sequence and structure motifs
PDBeMotif resource
Jump to [ Top of page · SCOP classification · InterPro annotation · PDBeMotif links · Functional annotation ]
Internal database links
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Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry
out SCOP domain assignments to all genomes at the superfamily level.
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Alignments of sequences to 1 models
in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical
are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.
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Browse and view proteins in genomes which have
different domain combinations including a Carbamoyl phosphate synthetase, small subunit N-terminal domain domain.
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Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.
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Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.
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There are 1 hidden Markov models representing the Carbamoyl phosphate synthetase, small subunit N-terminal domain superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.
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Jump to [ Top of page · SCOP classification · InterPro annotation · PDBeMotif links · Functional annotation · Internal database links ]
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