SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a/b) [ 51349] (147)
Fold:   Flavodoxin-like [ 52171] (15)
Superfamily:   N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) [ 52255]
Family:   N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) [ 52256]


Family statistics
Genomes (2,628) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 2,740 20,569 6
Proteins 2,734 20,535 6


Enzyme Commission (EC)

(
show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Isomerases0Least InformativeDirect
Enzyme Commission (EC)Lyases0.000000007824Least InformativeDirect
Enzyme Commission (EC)Ligases0.1316Least InformativeInherited
Enzyme Commission (EC)Carboxy-lyases0Moderately InformativeDirect
Enzyme Commission (EC)Forming carbon-nitrogen bonds0.0003149Moderately InformativeDirect
Enzyme Commission (EC)Intramolecular transferases (mutases)0InformativeDirect
Enzyme Commission (EC)Acid--D-amino-acid ligases (peptide synthases)0.0000001143InformativeDirect
Enzyme Commission (EC)Phosphoribosylaminoimidazole carboxylase0Highly InformativeDirect

Document: EC annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Isomerases0.000000000000001464Moderately InformativeDirect
Enzyme Commission (EC)Lyases0.0000000244Moderately InformativeDirect
Enzyme Commission (EC)Ligases0.1748Moderately InformativeInherited
Enzyme Commission (EC)Carboxy-lyases0InformativeDirect
Enzyme Commission (EC)Intramolecular transferases0InformativeDirect
Enzyme Commission (EC)Forming carbon-nitrogen bonds0.001843InformativeInherited
Enzyme Commission (EC)Transferring other groups0Highly InformativeDirect
Enzyme Commission (EC)Acid--amino-acid ligases (peptide synthases)0.0000006533Highly InformativeDirect

Document: EC annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Enzyme Commission (EC) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 12 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Enzyme Commission (EC) · Internal database links ]