SUPERFAMILY 1.75 HMM library and genome assignments server

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Multidrug-binding domain of transcription activator BmrR family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a+b) [ 53931] (376)
Fold:   Probable bacterial effector-binding domain [ 55135]
Superfamily:   Probable bacterial effector-binding domain [ 55136] (4)
Family:   Multidrug-binding domain of transcription activator BmrR [ 55137]


Family statistics
Genomes (14) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 14 79 5
Proteins 14 79 5


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Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 5 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Probable bacterial effector-binding domain domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


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