SUPERFAMILY 1.75 HMM library and genome assignments server

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DHN aldolase/epimerase family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a+b) [ 53931] (376)
Fold:   T-fold [ 55619] (2)
Superfamily:   Tetrahydrobiopterin biosynthesis enzymes-like [ 55620] (4)
Family:   DHN aldolase/epimerase [ 55628] (2)


Family statistics
Genomes (723) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 807 4,708 7
Proteins 807 4,708 7


Enzyme Commission (EC)

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show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Lyases0Least InformativeDirect
Enzyme Commission (EC)Aldehyde-lyases0InformativeDirect
Enzyme Commission (EC)Diphosphotransferases0.000000000002979Highly InformativeDirect

Document: EC annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Transferases1Least InformativeInherited
Enzyme Commission (EC)Lyases0Moderately InformativeDirect
Enzyme Commission (EC)Isomerases0.00004594Moderately InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.00000000001098InformativeDirect
Enzyme Commission (EC)Transferring alkyl or aryl groups, other than methyl groups0.005594InformativeInherited
Enzyme Commission (EC)Aldehyde-lyases0Highly InformativeDirect

Document: EC annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Enzyme Commission (EC) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 34 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Tetrahydrobiopterin biosynthesis enzymes-like domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Enzyme Commission (EC) · Internal database links ]