SUPERFAMILY 1.75 HMM library and genome assignments server

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Calcium ATPase, transduction domain A family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All beta proteins [ 48724] (174)
Fold:   Double-stranded beta-helix [ 51181] (7)
Superfamily:   Calcium ATPase, transduction domain A [ 81653]
Family:   Calcium ATPase, transduction domain A [ 81652]


Family statistics
Genomes (407) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 859 2,450 1
Proteins 859 2,450 1


Enzyme Commission (EC)

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show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Acting on acid anhydrides0Least InformativeDirect
Enzyme Commission (EC)Acting on acid anhydrides; catalyzing transmembran0InformativeDirect
Enzyme Commission (EC)Potassium-transporting ATPase0Highly InformativeDirect
Enzyme Commission (EC)Calcium-transporting ATPase0Highly InformativeDirect
Enzyme Commission (EC)Sodium/potassium-exchanging ATPase0Highly InformativeDirect
Enzyme Commission (EC)Cadmium-exporting ATPase0.00000000005159Highly InformativeDirect
Enzyme Commission (EC)Hydrogen/potassium-exchanging ATPase0.0000000003338Highly InformativeDirect

Document: EC annotation of SCOP domains

Mouse Phenotype (MP)

(show details)
MP termFDR (all)SDMP levelAnnotation (direct or inherited)
Mammalian Phenotype (MP)abnormal muscle physiology0.06658Moderately InformativeInherited
Mammalian Phenotype (MP)impaired muscle contractility0.0002113InformativeDirect

Document: MP annotation of SCOP domains

Worm Phenotype (WP)

(show details)
WP termFDR (all)SDWP levelAnnotation (direct or inherited)
Worm Phenotype (WP)cell physiology variant0.03366Least InformativeInherited
Worm Phenotype (WP)blast cell physiology variant0.03366Least InformativeInherited
Worm Phenotype (WP)cell morphology variant0.04648Least InformativeInherited
Worm Phenotype (WP)cell type morphology variant0.008713Moderately InformativeInherited
Worm Phenotype (WP)cell death variant0.02661Moderately InformativeInherited
Worm Phenotype (WP)chemical response variant0.05688Moderately InformativeInherited
Worm Phenotype (WP)drug hypersensitive0.0008678InformativeDirect
Worm Phenotype (WP)nicotine hypersensitive0.00000003716Highly InformativeDirect

Document: WP annotation of SCOP domains

Fly Anatomy (FA)

(show details) Document: FA annotation of SCOP domains

Zebrafish Anatomy (ZA)

(show details) Document: ZA annotation of SCOP domains

Xenopus Anatomy (XA)

(show details) Document: XA annotation of SCOP domains

Arabidopsis Plant Ontology (AP)

(show details)
AP termFDR (all)SDAP levelAnnotation (direct or inherited)
Plant ANatomical entity (PAN)sporangium0.0002495Least InformativeDirect
Plant ANatomical entity (PAN)microgametophyte0.001778Least InformativeInherited
Plant ANatomical entity (PAN)microsporophyll0.004093Least InformativeInherited
Plant ANatomical entity (PAN)androecium0.2142Least InformativeInherited
Plant ANatomical entity (PAN)portion of ground tissue0.0000007338InformativeDirect
Plant ANatomical entity (PAN)ground tissue cell0.000000052Highly InformativeDirect
Plant ANatomical entity (PAN)anther0.0005454Highly InformativeDirect
Plant ANatomical entity (PAN)chlorenchyma0.04029Highly InformativeInherited

Document: AP annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Hydrolases1Least InformativeInherited
Enzyme Commission (EC)Acting on acid anhydrides0.2123Moderately InformativeInherited
Enzyme Commission (EC)Translocases0InformativeDirect
Enzyme Commission (EC)Catalysing the translocation of inorganic cations0Highly InformativeDirect

Document: EC annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Mouse Phenotype (MP) · Worm Phenotype (WP) · Fly Anatomy (FA) · Zebrafish Anatomy (ZA) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Enzyme Commission (EC) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 3 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Calcium ATPase, transduction domain A domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Mouse Phenotype (MP) · Worm Phenotype (WP) · Fly Anatomy (FA) · Zebrafish Anatomy (ZA) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Enzyme Commission (EC) · Internal database links ]