SUPERFAMILY 1.75 HMM library and genome assignments server

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TatD Mg-dependent DNase-like family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a/b) [ 51349] (147)
Fold:   TIM beta/alpha-barrel [ 51350] (33)
Superfamily:   Metallo-dependent hydrolases [ 51556] (18)
Family:   TatD Mg-dependent DNase-like [ 82267] (4)


Family statistics
Genomes (2,967) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 4,246 31,262 4
Proteins 4,246 31,262 4


Worm Phenotype (WP)

(
show details) Document: WP annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Worm Phenotype (WP) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 77 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Metallo-dependent hydrolases domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Worm Phenotype (WP) · Internal database links ]