2010
Boulais J, Trost M, Landry CR, Dieckmann R, Levy ED, Soldati T, Michnick SW, Thibault P, Desjardins M.Molecular characterization of the evolution of phagosomes.
Mol Syst Biol. 2010 Oct 19;6:423. Pubmed
Levy ED
A simple definition of structural regions in proteins and its use in analyzing interface evolution.
J Mol Biol. 2010 Nov 5;403(4):660-70. Epub 2010 Sep 22. Pubmed
Levy ED, Teichmann SA.
Systemizing the structures and structuring the system.
Expert Rev Proteomics. 2010 Jun;7(3):319-22. Pubmed
Venkatakrishnan AJ, Levy ED, Teichmann SA.
Homomeric Protein Complexes: Evolution and Assembly
Biochem Soc Trans. 2010 Aug;38(4):879-82. Pubmed
Levy ED*, Landry CR*, Michnick SW.
Signaling through cooperation.
Science 2010 May 21;328(5981):983-4. Pubmed
2009
Pechmann S, Levy ED, Tartaglia GG, Vendruscolo M.Physicochemical principles that regulate the competition between functional and dysfunctional association of proteins.
PNAS. 2009 Jun 23. Pubmed
Landry CR*, Levy ED*, Michnick SW.
Weak functional constraints on phosphoproteomes.
Trends Genet. 2009 Apr 4. Pubmed
Levy ED*, Landry CR*, Michnick SW.
How perfect can protein interactomes be?
Sci Signal. 2009 Mar 3;2(60):pe11. Pubmed
Villar G, Wilber AW, Williamson AJ, Thiara P, Doye JPK, Louis AA, Jochum MN, Lewis ACF, Levy ED
Self-Assembly and Evolution of Homomeric Protein Complexes
Phys. Rev. Let. 2009 Mar 102:11
2008
Levy ED, Boeri-Erba E, Robinson CV, Teichmann SA.Assembly reflects evolution of protein complexes.
Nature Jun 26;453(7199):1262-5 Pubmed
Levy ED, Pereira-Leal JB.
Evolution and dynamics of protein interactions and networks.
Curr Opin Struct Biol. 2008 Apr 28. Pubmed
2007
Levy ED.PiQSi: Protein Quaternary Structure investigation.
Structure Nov;15(11):1364-7. Pubmed
Audit B, Levy ED, Gilks WR, Goldovsky L, Ouzounis CA.
CORRIE: enzyme sequence annotation with confidence estimates.
BMC Bioinformatics 2007 May 22;8 Suppl 4:S3. Pubmed
Peirera-Leal JB, Levy ED, Kamp CD, Teichmann SA.
Evolution of protein complexes by duplication of homomeric interactions
Genome Biol. 2007 Apr 5;8(4):R51 Pubmed
2006
Levy ED, Pereira-Leal JB, Chothia C, Teichmann SA.3D complex: a structural classification of protein complexes.
PLoS Comput Biol. 2006 Nov 17;2(11):e155 Pubmed
"Must Read" in Faculty 1000
Pereira-Leal JB, Levy ED, Teichmann SA.
The origins and evolution of functional modules: lessons from protein complexes.
Philos Trans R Soc Lond B Biol Sci. 2006 Mar 29;361(1467):507-17. Review. Pubmed
2005
Levy ED, Ouzounis CA, Gilks WR, Audit B.Probabilistic annotation of protein sequences based on functional classifications.
BMC Bioinformatics. 2005 Dec 14;6:302. Pubmed