Select to display Genome
No Yes  
Amphimedon queenslandica
No Yes  
Trichoplax adhaerens
No Yes  
Proterospongia sp. ATCC 50818
No Yes  
Monosiga brevicollis
No Yes  
Acholeplasma laidlawii PG-8A
No Yes  
Gloeobacter violaceus PCC 7421
No Yes  
Nostoc sp. PCC 7524
No Yes  
Anabaena sp. 90
No Yes  
Eggerthella lenta DSM 2243
No Yes  
Microbacterium testaceum StLB037
No Yes  
Truepera radiovictrix DSM 17093
No Yes  
Deinococcus gobiensis I-0
No Yes  
Deinococcus deserti VCD115
No Yes  
Deinococcus maricopensis DSM 21211
No Yes  
Deinococcus geothermalis DSM 11300
No Yes  
Deinococcus proteolyticus MRP
No Yes  
Deinococcus radiodurans R1
No Yes  
Erysipelothrix rhusiopathiae str. Fujisawa
No Yes  
Clostridium clariflavum DSM 19732
No Yes  
Clostridium cellulolyticum H10
No Yes  
Clostridium thermocellum ATCC 27405
No Yes  
Ruminococcus bromii
No Yes  
Ruminococcus albus 7
No Yes  
Desulfotomaculum acetoxidans DSM 771
No Yes  
Acetobacterium woodii DSM 1030
No Yes  
Eubacterium eligens ATCC 27750
No Yes  
Eubacterium limosum KIST612
No Yes  
Clostridium difficile 630
No Yes  
Clostridium saccharolyticum WM1
No Yes  
Clostridium lentocellum DSM 5427
No Yes  
[Ruminococcus] obeum
No Yes  
Eubacterium rectale M104/1
No Yes  
Eubacterium rectale ATCC 33656
No Yes  
Roseburia hominis A2-183
No Yes  
Butyrivibrio fibrisolvens
No Yes  
Candidatus Arthromitus sp. SFB-mouse-Japan
No Yes  
Clostridium sp. BNL1100
No Yes  
Clostridium perfringens ATCC 13124
No Yes  
Clostridium cellulovorans 743B
No Yes  
Clostridium acetobutylicum ATCC 824
No Yes  
Lactobacillus casei ATCC 334
No Yes  
Lactobacillus rhamnosus Lc 705
No Yes  
Paenibacillus sp. JDR-2
No Yes  
Paenibacillus mucilaginosus 3016
No Yes  
Bacillus selenitireducens MLS10
No Yes  
Oceanobacillus iheyensis HTE831
No Yes  
Bacillus thuringiensis str. Al Hakam
No Yes  
Bacillus cereus 03BB102
No Yes  
Candidatus Cloacamonas acidaminovorans
No Yes  
Melioribacter roseus P3M
No Yes  
Ignavibacterium album JCM 16511
No Yes  
Haliscomenobacter hydrossis DSM 1100
No Yes  
Salinibacter ruber M8
No Yes  
Parabacteroides distasonis ATCC 8503
No Yes  
Prevotella melaninogenica ATCC 25845
No Yes  
Bacteroides helcogenes P 36-108
No Yes  
Bacteroides thetaiotaomicron VPI-5482
No Yes  
Bacteroides fragilis YCH46
No Yes  
Robiginitalea biformata HTCC2501
No Yes  
Ornithobacterium rhinotracheale DSM 15997
No Yes  
Capnocytophaga canimorsus Cc5
No Yes  
Flavobacterium johnsoniae UW101
No Yes  
Phycisphaera mikurensis NBRC 102666
No Yes  
Isosphaera pallida ATCC 43644
No Yes  
Rhodopirellula baltica SH 1
No Yes  
Pirellula staleyi DSM 6068
No Yes  
Opitutus terrae PB90-1
No Yes  
Akkermansia muciniphila ATCC BAA-835
No Yes  
Elusimicrobium minutum Pei191
No Yes  
Caldisericum exile AZM16c01
No Yes  
Granulicella mallensis MP5ACTX8
No Yes  
Terriglobus saanensis SP1PR4
No Yes  
Desulfobacca acetoxidans DSM 11109
No Yes  
Syntrophobacter fumaroxidans MPOB
No Yes  
Desulfatibacillum alkenivorans AK-01
No Yes  
Desulfococcus oleovorans Hxd3
No Yes  
Geobacter daltonii FRC-32
No Yes  
Geobacter uraniireducens Rf4
No Yes  
Geobacter sulfurreducens KN400
No Yes  
Geobacter metallireducens GS-15
No Yes  
Corallococcus coralloides DSM 2259
No Yes  
Myxococcus fulvus HW-1
No Yes  
Cellvibrio japonicus Ueda107
No Yes  
Shewanella piezotolerans WP3
No Yes  
Pseudoalteromonas atlantica T6c
No Yes  
Glaciecola sp. 4H-3-7+YE-5
No Yes  
Marinobacter hydrocarbonoclasticus ATCC 49840
No Yes  
Marinobacter aquaeolei VT8
No Yes  
Alteromonas sp. SN2
No Yes  
Alteromonas macleodii str. 'Deep ecotype'
No Yes  
Hahella chejuensis KCTC 2396
No Yes  
Methylomicrobium alcaliphilum
No Yes  
Methylomonas methanica MC09
No Yes  
Methanocella conradii HZ254
No Yes  
Methanosaeta harundinacea 6Ac
No Yes  
Methanosaeta thermophila PT
No Yes  
Methanosaeta concilii GP6
No Yes  
Methanococcoides burtonii DSM 6242
No Yes  
Methanosarcina acetivorans C2A
No Yes  
Methanosarcina mazei Go1
No Yes  
Methanosphaerula palustris E1-9c
No Yes  
Methanospirillum hungatei JF-1
No Yes  
Methanoplanus petrolearius DSM 11571
No Yes  
Methanoculleus bourgensis MS2
No Yes  
Methanoculleus marisnigri JR1
No Yes  
Archaeoglobus fulgidus DSM 4304
No Yes  
Pyrococcus abyssi GE5
No Yes  
Pyrococcus furiosus COM1
No Yes  
Thermoplasmatales archaeon BRNA1
No Yes  
Halopiger xanaduensis SH-6
No Yes  
Haloterrigena turkmenica DSM 5511
No Yes  
Natrialba magadii ATCC 43099
No Yes  
Halogeometricum borinquense DSM 11551
No Yes  
Haloferax mediterranei ATCC 33500
No Yes  
Halomicrobium mukohataei DSM 12286
No Yes  
Halorhabdus utahensis DSM 12940
No Yes  
Haloarcula hispanica ATCC 33960
No Yes  
Haloarcula marismortui ATCC 43049
No Yes  
Halobacterium salinarum R1
No Yes  
Halobacterium sp. NRC-1
No Yes  
Methanotorris igneus Kol 5
No Yes  
methanocaldococcus infernus ME
No Yes  
Methanothermococcus okinawensis IH1
No Yes  
Methanococcus aeolicus Nankai-3
No Yes  
Methanococcus voltae A3
No Yes  
Methanococcus vannielii SB
No Yes  
Dactylococcopsis salina PCC 8305
No Yes  
Synechococcus sp. JA-2-3B'a(2-13)
No Yes  
Synechococcus sp. JA-3-3Ab
No Yes  
Cyanothece sp. PCC 7822
No Yes  
Gloeobacter kilaueensis Gloeobacter sp. JS
No Yes  
Stanieria cyanosphaera PCC 7437
No Yes  
Anabaena cylindrica PCC 7122
No Yes  
Deinococcus peraridilitoris DSM 19664
No Yes  
Erysipelothrix rhusiopathiae SY1027
No Yes  
Clostridium thermocellum DSM 1313
No Yes  
[Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532
No Yes  
Ruminococcus champanellensis 18P13
No Yes  
Clostridium difficile BI1
No Yes  
Clostridium difficile R20291
No Yes  
Clostridium difficile CD196
No Yes  
Clostridium saccharolyticum Clostridium cf. saccharolyticum K10
No Yes  
Candidatus Arthromitus sp. SFB-rat-Yit
No Yes  
Candidatus Arthromitus sp. SFB-mouse-Yit
No Yes  
Clostridium saccharoperbutylacetonicum N1-4(HMT)
No Yes  
Clostridium perfringens str. 13
No Yes  
Clostridium acetobutylicum DSM 1731
No Yes  
Clostridium acetobutylicum EA 2018
No Yes  
Thermoanaerobacterium saccharolyticum JW/SL-YS485
No Yes  
Enterococcus faecalis OG1RF
No Yes  
Enterococcus faecalis V583
No Yes  
Lactobacillus rhamnosus LOCK908
No Yes  
Lactobacillus rhamnosus LOCK900
No Yes  
Lactobacillus rhamnosus ATCC 8530
No Yes  
Lactobacillus rhamnosus GG
No Yes  
Lactobacillus rhamnosus GG
No Yes  
Thermobacillus composti KWC4
No Yes  
Paenibacillus mucilaginosus KNP414
No Yes  
Paenibacillus mucilaginosus K02
No Yes  
Bacillus toyonensis BCT-7112
No Yes  
Bacillus thuringiensis MC28
No Yes  
Bacillus thuringiensis serovar chinensis CT-43
No Yes  
Bacillus thuringiensis YBT-1518
No Yes  
Bacillus thuringiensis Bt407
No Yes  
Bacillus thuringiensis serovar kurstaki str. HD73
No Yes  
Bacillus thuringiensis BMB171
No Yes  
Bacillus thuringiensis serovar finitimus YBT-020
No Yes  
Bacillus thuringiensis serovar thuringiensis str. IS5056
No Yes  
Bacillus cereus FRI-35
No Yes  
Bacillus cereus biovar anthracis str. CI
No Yes  
Bacillus cereus AH187
No Yes  
Bacillus cereus B4264
No Yes  
Bacillus cereus Q1
No Yes  
Bacillus cereus F837/76
No Yes  
Bacillus cereus NC7401
No Yes  
Bacillus cereus E33L
No Yes  
Bacillus cereus ATCC 14579
No Yes  
Bacillus cereus ATCC 10987
No Yes  
Salinibacter ruber DSM 13855
No Yes  
Rhodothermus marinus SG0.5JP17-172
No Yes  
Bacteroides fragilis 638R
No Yes  
Bacteroides fragilis NCTC 9343
No Yes  
Singulisphaera acidiphila DSM 18658
No Yes  
Desulfocapsa sulfexigens DSM 10523
No Yes  
Geobacter sulfurreducens PCA
No Yes  
Sorangium cellulosum So0157-2
No Yes  
Myxococcus stipitatus DSM 14675
No Yes  
Sulfuricella denitrificans skB26
No Yes  
Alteromonas macleodii str. 'Ionian Sea UM4b'
No Yes  
Alteromonas macleodii str. 'Ionian Sea UM7'
No Yes  
Alteromonas macleodii str. 'Ionian Sea U8'
No Yes  
Alteromonas macleodii str. 'Ionian Sea U7'
No Yes  
Alteromonas macleodii str. 'Ionian Sea U4'
No Yes  
Alteromonas macleodii str. 'Aegean Sea MED64'
No Yes  
Alteromonas macleodii AltDE1
No Yes  
Alteromonas macleodii str. 'English Channel 673'
No Yes  
Alteromonas macleodii str. 'Balearic Sea AD45'
No Yes  
Alteromonas macleodii str. 'Black Sea 11'
No Yes  
Alteromonas macleodii ATCC 27126
No Yes  
Methanolobus psychrophilus R15
No Yes  
Methanosarcina mazei Tuc01
No Yes  
Archaeoglobus sulfaticallidus PM70-1
No Yes  
Thermococcus litoralis DSM 5473
No Yes  
Pyrococcus sp. NA2
No Yes  
Pyrococcus furiosus DSM 3638
No Yes  
Candidatus Methanomethylophilus alvus Mx1201
No Yes  
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
No Yes  
Natronobacterium gregoryi SP2
No Yes  
Halorhabdus tiamatea SARL4B
No Yes  
Haloarcula hispanica N601
No Yes  
Methanococcus maripaludis X1
No Yes  
Acholeplasma laidlawii PG-8A
No Yes  
1_050719N (meta-genome)
No Yes  
1_Upper_euphotic (meta-genome)
No Yes  
2_Base_of_chrolophyll_max (meta-genome)
No Yes  
3_050719R (meta-genome)
No Yes  
3_Below_base_of_euphotic (meta-genome)
No Yes  
4_050719Q (meta-genome)
No Yes  
4_Deep_abyss (meta-genome)
No Yes  
5_050719P (meta-genome)
No Yes  
5_Below_upper_mesopelagic (meta-genome)
No Yes  
6_Upper_euphotic (meta-genome)
No Yes  
7_Oxygen_minimum_layer (meta-genome)
No Yes  
Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)
No Yes  
Bath Hot Springs, planktonic community (meta-genome)
No Yes  
Combined (meta-genome)
No Yes  
Cyphomyrmex longiscapus fungus garden (meta-genome)
No Yes  
Dump bottom (Dump bottom) (meta-genome)
No Yes  
Dump top (Dump top) (meta-genome)
No Yes  
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)
No Yes  
Freshwater propionate enrichment of Brocadia fulgida (meta-genome)
No Yes  
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)
No Yes  
Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes
No Yes  
Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)
No Yes  
Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)
No Yes  
Human Gut Community Subject 7 (meta-genome)
No Yes  
Human Gut Community Subject 8 (meta-genome)
No Yes  
Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)
No Yes  
Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)
No Yes  
Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)
No Yes  
Marine anammox bioreactor enriched for Scalindua species (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)
No Yes  
Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)
No Yes  
Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)
No Yes  
NCBI 2017_08 genome
No Yes  
Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)
No Yes  
Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)
No Yes  
simHC - Simulated High Complexity Metagenome (meta-genome)
No Yes  
simLC - Simulated Low Complexity Metagenome (meta-genome)
No Yes  
simMC - Simulated Medium Complexity Metagenome (meta-genome)
No Yes  
Sludge/Australian, Phrap Assembly (meta-genome)
No Yes  
Sludge/US, Jazz Assembly (meta-genome)
No Yes  
Sludge/US, Phrap Assembly (meta-genome)
No Yes  
Soil microbial communities from Minnesota Farm (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)
No Yes  
Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)
No Yes  
STRING v9.0.5 (STRING)
No Yes  
Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)
No Yes  
Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)
No Yes  
Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)
No Yes  
Uniprot 2018_03 genome
No Yes  
Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)
No Yes  
Global Ocean Sampling Expedition (GOS)
No Yes  
NCBI plasmid sequences (Plasmids)
No Yes  
NCBI viral sequences (Viral)
No Yes  
PDB chains (SCOP 1.75 ) (PDB)
No Yes  
Protein Data Bank (all PDB sequenc)
No Yes  
SCOP2 SCOPe CATH ECOD (all domain sequ)
No Yes  
TargetDB (Targets)
No Yes
ALL (only advised for small superfamilies)