Select to display Genome No Canis familiaris 58 (pseudogenes) - DogNo Danio rerio 58 (pseudogenes) - ZebrafishNo Homo sapiens 58 (pseudogenes) - HumanNo Mus musculus 56 (pseudogenes) - House mouseNo Pan troglodytes 58 (pseudogenes) - ChimpanzeeNo Rattus norvegicus 58 (pseudogenes) - Norway ratNo Homo sapiens 76_38 - HumanNo Pan troglodytes 76_2.1.4 - ChimpanzeeNo Gorilla gorilla 76_3.1 - Western gorillaNo Pongo abelii 76_2 - Sumatran orangutanNo Tarsius syrichta 76_1 No Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbonNo Papio anubis 76 - Olive baboonNo Macaca mulatta 76_1 - Rhesus monkeyNo Callithrix jacchus 76_3.2.1 - White-tufted-ear marmosetNo Otolemur garnettii 76_3 - Small-eared galagoNo Microcebus murinus 76_1 - Gray mouse lemurNo Physcomitrella patens subsp. patens 22 No Rattus norvegicus 76_5.0 - Norway ratNo Mus musculus 76_38 - House mouseNo Dipodomys ordii 76_1 - Ord's kangaroo ratNo Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrelNo Heterocephalus glaber v1.7-2 - Naked mole-ratNo Cavia porcellus 76_3 - Domestic guinea pigNo Oryctolagus cuniculus 76_2 - RabbitNo Ochotona princeps 76 - American pikaNo Tupaia belangeri 76 - Northern tree shrewNo Sus scrofa 76_10.2 - PigNo Bos taurus 76_3.1 - CattleNo Ovis aries 76_3.1 - SheepNo Vicugna pacos 76_1 - AlpacaNo Tursiops truncatus 76_1 - Bottlenose dolphinNo Mustela putorius furo 76_1.0 - Domestic ferretNo Ailuropoda melanoleuca 76_1 - Giant pandaNo Canis familiaris 76_3.1 - DogNo Felis catus 76_6.2 - Domestic catNo Equus caballus 76_2 - HorseNo Myotis lucifugus 76_2.0 - Little brown batNo Pteropus vampyrus 76_1 - Large flying foxNo Sorex araneus 76_1 - European shrewNo Erinaceus europaeus 76 - Western European hedgehogNo Procavia capensis 76_1 - Cape rock hyraxNo Loxodonta africana 76_3 - African savanna elephantNo Echinops telfairi 76 - Small Madagascar hedgehogNo Dasypus novemcinctus 76_2 - Nine-banded armadilloNo Choloepus hoffmanni 76_1 - Hoffmann's two-fingered slothNo Macropus eugenii 76_1.0 - Tammar wallabyNo Sarcophilus harrisii 76_7.0 - Tasmanian devilNo Monodelphis domestica 76_5 - Gray short-tailed opossumNo Ornithorhynchus anatinus 76_5 - PlatypusNo Saccoglossus kowalevskii v3.0 No Petromyzon marinus 76_7.0 - Sea lampreyNo Meleagris gallopavo 76_2 - TurkeyNo Gallus gallus 76_4 - ChickenNo Anas platyrhynchos 76_1.0 - MallardNo Taeniopygia guttata 76_3.2.4 - Zebra finchNo Ficedula albicollis 76_1.0 - Collared flycatcherNo Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtleNo Anolis carolinensis 76_2.0 - Green anoleNo Xenopus laevis No Xenopus tropicalis 76_4.2 - Tropical clawed frogNo Latimeria chalumnae 76_1 - CoelacanthNo Lepisosteus oculatus 76 - Spotted garNo Gadus morhua 76_1 - Atlantic codNo Tetraodon nigroviridis 76_8 - Spotted green pufferfishNo Takifugu rubripes 76_4 - TorafuguNo Gasterosteus aculeatus 76_1 - Three-spined sticklebackNo Oryzias latipes 76_1 - Japanese medakaNo Xiphophorus maculatus 76_4.4.2 - Southern platyfishNo Poecilia formosa 76 - Amazon mollyNo Oreochromis niloticus 76_1.0 - Nile tilapiaNo Astyanax mexicanus 76 - Mexican tetraNo Danio rerio 76_9 - ZebrafishNo Oikopleura dioica No Ciona savignyi 76_2.0 - Pacific transparent sea squirtNo Ciona intestinalis 76 - Vase tunicateNo Strongylocentrotus purpuratus v3.1 - Purple sea urchinNo Adineta vaga No Octopus bimaculoides 280 No Crassostrea gigas 22 - Pacific oysterNo Lottia gigantea No Helobdella robusta No Capitella sp. I No Danaus plexippus OGS1.0 - Monarch butterflyNo Heliconius melpomene No Bombyx mori No Nasonia vitripennis No Apis mellifera 38.2d - Honey beeNo Harpegnathos saltator v3.3 - Jerdon's jumping antNo Linepithema humile v1.1 - Argentine antNo Pogonomyrmex barbatus v1.2 - Red harvester antNo Solenopsis invicta v.2.2.3 - Red fire antNo Acromyrmex echinatior v3.8 - Panamanian leafcutter antNo Atta cephalotes v1.1 No Camponotus floridanus v3.3 - Florida carpenter antNo Lucilia cuprina - Australian sheep blowflyNo Drosophila grimshawi 1.3 No Drosophila willistoni 1.3 No Drosophila pseudoobscura 2.13 No Drosophila persimilis 1.3 No Drosophila suzukii No Drosophila yakuba 1.3 No Drosophila simulans 1.3 No Drosophila sechellia 1.3 No Drosophila melanogaster 76_5 - Fruit flyNo Drosophila erecta 1.3 No Drosophila ananassae 1.3 No Drosophila virilis 1.2 No Drosophila mojavensis 1.3 No Megaselia scalaris 22 No Aedes aegypti 55 - Yellow fever mosquitoNo Culex pipiens quinquefasciatus No Anopheles darlingi 22 - American malaria mosquitoNo Anopheles gambiae 49_3j - African malaria mosquitoNo Tribolium castaneum 3.0 - Red flour beetleNo Pediculus humanus corporis No Acyrthosiphon pisum No Rhodnius prolixus 22 No Daphnia pulex No Strigamia maritima 22 No Sarcoptes scabiei No Tetranychus urticae No Ixodes scapularis No Pristionchus pacificus No Meloidogyne incognita No Meloidogyne hapla No Onchocerca volvulus 22 No Brugia malayi WS250 - Agent of lymphatic filariasisNo Caenorhabditis japonica No Caenorhabditis brenneri No Caenorhabditis remanei No Caenorhabditis elegans 76_235 - RoundwormNo Caenorhabditis briggsae 2 No Trichinella spiralis 22 No Hymenolepis microstoma No Echinococcus multilocularis No Echinococcus granulosus No Taenia solium No Schistosoma mansoni No Mnemiopsis leidyi - Sea walnutNo Thelohanellus kitauei No Acropora digitifera v1.0No Nematostella vectensis 1.0 - Starlet sea anemoneNo Hydra vulgaris No Amphimedon queenslandica No Trichoplax adhaerens No Proterospongia sp. ATCC 50818 No Monosiga brevicollis No Sphaeroforma arctica JP610 No Capsaspora owczarzaki ATCC 30864 No Conidiobolus coronatus NRRL28638 v1.0No Mortierella verticillata NRRL 6337 No Phycomyces blakesleeanus No Rhizopus oryzae RA 99-880 No Mucor circinelloides No Rhizomucor miehei CAU432 No Malassezia globosa CBS 7966 No Sporisorium reilianum 22 No Ustilago maydis No Mixia osmundae IAM 14324 v1.0No Cronartium quercuum f. sp. fusiforme G11 v1.0No Puccinia graminis f. sp. tritici CRL 75-36-700-3 No Melampsora laricis-populina No Rhodotorula graminis WP1 v1.0 No Sporobolomyces roseus IAM 13481 No Microbotryum violaceum 22 No Wallemia sebi v1.0 No Sphaerobolus stellatus v1.0No Piloderma croceum F 1598 v1.0No Serpula lacrymans var. lacrymans S7.9 No Coniophora puteana No Hydnomerulius pinastri v2.0No Paxillus rubicundulus Ve08.2h10 v1.0No Pisolithus microcarpus 441 v1.0No Pisolithus tinctorius Marx 270 v1.0No Scleroderma citrinum Foug A v1.0No Coprinopsis cinerea okayama7 130 v3 No Pleurotus ostreatus No Amanita thiersii Skay4041 v1.0No Amanita muscaria Koide v1.0 - Fly agaricNo Galerina marginata v1.0No Hebeloma cylindrosporum h7 v2.0No Laccaria bicolor S238N-H82 No Agaricus bisporus var. bisporus No Schizophyllum commune No Stereum hirsutum FP-91666 SS1 v1.0 No Heterobasidion annosum No Gloeophyllum trabeum v1.0 No Punctularia strigosozonata v1.0 No Sebacina vermifera MAFF 305830 v1.0No Fomitiporia mediterranea v1.0 No Tulasnella calospora AL13/4D v1.0No Postia placenta No Wolfiporia cocos MD-104 SS10 v1.0 No Fomitopsis pinicola v1.0 No Fomitopsis pinicola FP-58527 SS1 v3.0No Phanerochaete chrysosporium RP-78 2.1 No Dichomitus squalens No Trametes versicolor v1.0 No Tremella mesenterica No Daldinia eschscholzii EC12 v1.0No Apiospora montagnei NRRL 25634 v1.0No Magnaporthe poae ATCC 64411 22 No Magnaporthe grisea 70-15 No Podospora anserina No Sporotrichum thermophile ATCC 42464 No Thielavia terrestris NRRL 8126 No Chaetomium globosum CBS 148.51 No Neurospora tetrasperma No Neurospora discreta FGSC 8579 No Neurospora crassa OR74A No Cryphonectria parasitica No Verticillium albo-atrum VaMs.102 No Verticillium dahliae VdLs.17 No Acremonium alcalophilum v 1.0 No Glomerella graminicola 22 No Fusarium graminearum No Nectria haematococca mpVI No Fusarium oxysporum f. sp. lycopersici 4286 No Fusarium verticillioides 7600 No Trichoderma asperellum CBS 433.97 v1.0No Trichoderma atroviride No Trichoderma citrinoviride v1.0No Trichoderma reesei 1.2 No Trichoderma virens Gv29-8 No Trichoderma longibrachiatum ATCC 18648 v1.0No Trichoderma harzianum CBS 226.95 v1.0No Amorphotheca resinae v1.0 - Creosote fungusNo Botrytis cinerea B05.10 No Sclerotinia sclerotiorum No Blumeria graminis 22 No Didymella exigua CBS 183.55 v1.0No Leptosphaeria maculans 22 No Setosphaeria turcica v1.0 No Cochliobolus miyabeanus ATCC 44560 v1.0No Cochliobolus victoriae FI3 v1.0No Cochliobolus carbonum 26-R-13 v1.0No Cochliobolus heterostrophus No Alternaria brassicicola No Cochliobolus lunatus m118 v2.0No Pyrenophora teres f. teres 22 No Pyrenophora tritici-repentis No Stagonospora nodorum No Mycosphaerella graminicola IPO323 No Microsporum gypseum No Zasmidium cellare ATCC 36951 v1.0No Dothistroma septosporum No Septoria musiva v1.0 No Mycosphaerella fijiensis CIRAD86 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0No Paracoccidioides brasiliensis Pb18 No Coccidioides posadasii RMSCC 3488 No Coccidioides immitis RS No Ajellomyces dermatitidis SLH14081 No Histoplasma capsulatum class NAmI strain WU24 No Microsporum canis CBS 113480 No Trichophyton equinum CBS 127.97 No Trichophyton verrucosum HKI 0517 No Arthroderma benhamiae CBS 112371 No Trichophyton tonsurans CBS 112818 No Trichophyton rubrum CBS 118892 No Uncinocarpus reesii 1704 No Aspergillus zonatus v1.0No Penicillium chrysogenum Wisconsin 54-1255 No Penicillium chrysogenum v1.0No Aspergillus acidus v1.0No Aspergillus fumigatus Af293No Aspergillus brasiliensis v1.0No Aspergillus nidulans FGSC A4 No Aspergillus sydowii v1.0No Aspergillus versicolor v1.0No Aspergillus glaucus No Aspergillus carbonarius ITEM 5010 No Neosartorya fischeri NRRL 181 No Aspergillus terreus NIH2624 No Aspergillus tubingensis v1.0No Aspergillus wentii v1.0No Aspergillus oryzae RIB40 No Aspergillus niger 22 No Aspergillus niger ATCC 1015 No Aspergillus flavus NRRL3357 No Aspergillus clavatus NRRL 1 No Penicillium marneffei ATCC 18224 No Tuber melanosporum Mel28 22 No Tuber melanosporum Vittad No Hansenula polymorpha v2.0 No Dekkera bruxellensis CBS 2499 v2.0No Pichia membranifaciens v1.0 No Candida tanzawaensis NRRL Y-17324 v1.0No Candida dubliniensis CD36 No Candida tropicalis MYA-3404 No Candida parapsilosis No Candida albicans SC5314No Lodderomyces elongisporus NRRL YB-4239 No Babjeviella inositovora NRRL Y-12698 v1.0No Pichia stipitis CBS 6054 No Candida guilliermondii ATCC 6260 No Hyphopichia burtonii NRRL Y-1933 v1.0No Debaromyces hansenii No Wickerhamomyces anomalus No Pichia pastoris GS115 No Hanseniaspora valbyensis NRRL Y-1626 v1.1No Yarrowia lipolytica CLIB122No Candida lusitaniae ATCC 42720 No Metschnikowia bicuspidata NRRL YB-4993 v1.0No Vanderwaltozyma polyspora DSM 70294 No Candida glabrata CBS138No Kluyveromyces thermotolerans CBS 6340No Lachancea kluyveri No Kluyveromyces waltii No Ashbya gossypii ATCC 10895 No Zygosaccharomyces rouxii No Saccharomyces mikatae MIT No Saccharomyces paradoxus MIT No Saccharomyces cerevisiae 76 - Baker's yeastNo Saccharomyces bayanus MIT No Kluyveromyces lactis No Schizosaccharomyces cryophilus OY26 22 No Schizosaccharomyces octosporus yFS286 No Schizosaccharomyces japonicus yFS275 No Schizosaccharomyces pombe - Fission yeastNo Catenaria anguillulae PL171 v1.0No Allomyces macrogynus ATCC 38327 No Spizellomyces punctatus DAOM BR117 No Dictyostelium discoideum No Dictyostelium purpureum No Entamoeba dispar 1.2 No Entamoeba invadens 1.2 No Entamoeba histolytica 1 No Selaginella moellendorffii No Pinus taeda - Loblolly pineNo Picea abies - Norway spruceNo Eucalyptus grandis v201 - Rose gumNo Theobroma cacao B97-61/B2 v1 - CacaoNo Gossypium raimondii v221 No Citrus clementina v165 No Citrus sinensis v154 - Sweet orangeNo Thellungiella halophila v173 No Brassica rapa Chiifu-401 1.2 - Field mustardNo Capsella rubella v183 No Arabidopsis lyrata No Arabidopsis thaliana 10 - Thale cressNo Carica papaya No Medicago truncatula No Phaseolus vulgaris v186 - String beanNo Glycine max v109 - SoybeanNo Cucumis sativus v122 - CucumberNo Fragaria vesca No Malus domestica v196 - AppleNo Prunus persica v139 - PeachNo Linum usitatissimum v200 - FlaxNo Manihot esculenta v147 - CassavaNo Populus trichocarpa v156 - Black cottonwoodNo Vitis vinifera No Mimulus guttatus v140 - Spotted monkey flowerNo Solanum lycopersicum v.2.3 - TomatoNo Solanum tuberosum No Actinidia chinensis Hongyang No Aquilegia coerulea v195 No Triticum urartu 22 No Triticum aestivum 22 - Bread wheatNo Aegilops tauschii 22 No Brachypodium distachyon No Oryza barthii 22 - African wild riceNo Oryza meridionalis 22 No Oryza glumaepatula 22 No Oryza glaberrima - African riceNo Oryza punctata 22 No Oryza nivara 22 No Oryza brachyantha 22 - Malo sinaNo Oryza sativa ssp. japonica 5.0 - Japanese riceNo Oryza sativa v193 - RiceNo Phyllostachys heterocycla var. pubescens - MosochikuNo Panicum virgatum v202 - SwitchgrassNo Setaria italica v164 - Foxtail milletNo Zea mays subsp. mays No Zea mays v181 - MaizeNo Sorghum bicolor No Musa balbisiana - Balbis bananaNo Musa acuminata 22 - Wild Malaysian bananaNo Amborella trichopoda 22 No Physcomitrella patens No Coccomyxa subellipsoidea sp. C-169 v2 No Asterochloris sp. Cgr/DA1pho v1.0 No Chlorella variabilis sp. NC64A No Chlorella vulgaris No Volvox carteri f. nagariensis No Volvox carteri v199 No Chlamydomonas reinhardtii 4.0 No Ostreococcus sp. RCC809 No Ostreococcus lucimarinus CCE9901 No Ostreococcus tauri No Bathycoccus prasinos No Micromonas sp. RCC299 No Micromonas pusilla CCMP1545 v3.0 No Cyanidioschyzon merolae strain 10D 22 No Cyanidioschyzon merolae No Porphyridium purpureum 02_2012 No Thecamonas trahens ATCC 50062 No Bigelowiella natans CCMP2755 22 No Giardia lamblia 2.3 No Cyanophora paradoxa No Leishmania mexicana 2.4 No Leishmania major strain Friedlin No Leishmania infantum JPCM5 2.4 No Leishmania braziliensis MHOM/BR/75/M2904 2.4 No Trypanosoma vivax No Trypanosoma cruzi strain CL Brener No Trypanosoma congolense 2.4 No Trypanosoma brucei gambiense v4.1 No Trypanosoma brucei TREU927 v4.1 No Ectocarpus siliculosus No Aureococcus anophagefferens No Albugo laibachii 22 No Pythium iwayamai DAOM BR242034 22 No Pythium arrhenomanes ATCC 12531 22 No Pythium ultimum v1.7-2 No Pythium aphanidermatum DAOM BR444 22 No Pythium irregulare DAOM BR486 22 No Pythium vexans DAOM BR484 22 No Phytophthora ramorum 1.1 - Sudden oak death agentNo Phytophthora sojae 1.1 No Phytophthora infestans T30-4 No Phytophthora capsici No Hyaloperonospora arabidopsidis 22 No Phaeodactylum tricornutum CCAP 1055/1No Fragilariopsis cylindrus No Thalassiosira pseudonana CCMP1335No Perkinsus marinus ATCC 50983 No Paramecium tetraurelia No Tetrahymena thermophila SB210 1 No Ichthyophthirius multifiliis strain G5 No Cryptosporidium hominis No Cryptosporidium muris No Cryptosporidium parvum Iowa IINo Neospora caninum No Toxoplasma gondii VEGNo Toxoplasma gondii ME49No Toxoplasma gondii GT1No Babesia bovis T2Bo No Theileria parva No Theileria annulata No Plasmodium falciparum 3D7 No Plasmodium vivax SaI-1 7.0 No Plasmodium knowlesi strain H No Plasmodium yoelii ssp. yoelii 1 No Plasmodium chabaudi No Plasmodium berghei ANKA No Symbiodinium minutum clade B1 v1.2 No Naegleria gruberi No Trichomonas vaginalis No Guillardia theta CCMP2712 v1.0 No Emiliania huxleyi CCMP1516 No Leptolyngbya sp. PCC 7376 No Acaryochloris marina MBIC11017No Rivularia sp. PCC 7116 No Nostoc sp. PCC 7524 No Catenulispora acidiphila DSM 44928No Thermobifida fusca YXNo Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111No Streptosporangium roseum DSM 43021No Kitasatospora setae KM-6054No Streptomyces sp. PAMC26508 No Streptomyces flavogriseus ATCC 33331No Streptomyces sp. SirexAA-ENo Streptomyces griseus subsp. griseus NBRC 13350No Streptomyces bingchenggensis BCW-1No Streptomyces violaceusniger Tu 4113No Streptomyces avermitilis MA-4680No Streptomyces scabiei 87.22No Actinosynnema mirum DSM 43827No Pseudonocardia dioxanivorans CB1190No Amycolatopsis mediterranei U32No Actinoplanes sp. SE50/110No Actinoplanes missouriensis 431No Corynebacterium glutamicum RNo Anaerolinea thermophila UNI-1No Herpetosiphon aurantiacus DSM 785No Deinococcus maricopensis DSM 21211No Natranaerobius thermophilus JW/NM-WN-LFNo Clostridium clariflavum DSM 19732No Clostridium thermocellum ATCC 27405No Syntrophobotulus glycolicus DSM 8271No Clostridium phytofermentans ISDgNo Clostridium tetani E88No Clostridium botulinum A str. ATCC 3502No Enterococcus hirae ATCC 9790No Lactobacillus buchneri NRRL B-30929No Lactobacillus buchneri No Lactobacillus acidophilus 30SCNo Lactococcus garvieae ATCC 49156No Paenibacillus sp. JDR-2No Paenibacillus terrae HPL-003No Paenibacillus mucilaginosus 3016No Paenibacillus polymyxa M1No Listeria welshimeri serovar 6b str. SLCC5334No Listeria innocua Clip11262No Listeria seeligeri serovar 1/2b str. SLCC3954No Listeria monocytogenes serotype 4b str. CLIP 80459No Listeria ivanovii subsp. ivanovii PAM 55No Bacillus pumilus SAFR-032No Haliscomenobacter hydrossis DSM 1100No Saprospira grandis str. LewinNo Niastella koreensis GR20-10No Flexibacter litoralis DSM 6794No Candidatus Amoebophilus asiaticus 5a2No Cyclobacterium marinum DSM 745No Marivirga tractuosa DSM 4126No Fibrella aestuarina No Leadbetterella byssophila DSM 17132No Dyadobacter fermentans DSM 18053No Spirosoma linguale DSM 74No Runella slithyformis DSM 19594No Parabacteroides distasonis ATCC 8503No Prevotella intermedia 17No Porphyromonas asaccharolytica DSM 20707No Bacteroides salanitronis DSM 18170No Bacteroides thetaiotaomicron VPI-5482No Bacteroides fragilis YCH46No Pedobacter heparinus DSM 2366No Fluviicola taffensis DSM 16823No Owenweeksia hongkongensis DSM 17368No Zunongwangia profunda SM-A87No Gramella forsetii KT0803No Maribacter sp. HTCC2170No Zobellia galactanivorans No Cellulophaga algicola DSM 14237No Cellulophaga lytica DSM 7489No Flavobacteriaceae bacterium 3519-10No Polaribacter sp. MED152 No Capnocytophaga canimorsus Cc5No Capnocytophaga ochracea DSM 7271No Flavobacterium indicum GPTSA100-9No Flavobacterium branchiophilum FL-15No Flavobacterium johnsoniae UW101No Waddlia chondrophila WSU 86-1044No Candidatus Protochlamydia amoebophila UWE25No Parachlamydia acanthamoebae UV-7No Simkania negevensis ZNo Isosphaera pallida ATCC 43644No Planctomyces brasiliensis DSM 5305No Planctomyces limnophilus DSM 3776No Rhodopirellula baltica SH 1No Pirellula staleyi DSM 6068No Coraliomargarita akajimensis DSM 45221No Leptospira interrogans serovar Lai str. IPAVNo Treponema primitia ZAS-2No Treponema brennaborense DSM 12168No Treponema denticola ATCC 35405No Candidatus Solibacter usitatus Ellin6076No Sebaldella termitidis ATCC 33386No Ilyobacter polytropus DSM 2926No candidate division WWE3 bacterium RAAC2_WWE3_1 No Geobacter sp. M21No Geobacter uraniireducens Rf4No Geobacter lovleyi SZNo Geobacter bemidjiensis BemNo Geobacter sulfurreducens KN400No Geobacter metallireducens GS-15No Pelobacter propionicus DSM 2379No Haliangium ochraceum DSM 14365No Sorangium cellulosum 'So ce 56'No Stigmatella aurantiaca DW4/3-1No Corallococcus coralloides DSM 2259No Myxococcus xanthus DK 1622No Myxococcus fulvus HW-1No Burkholderia rhizoxinica HKI 454No Ralstonia solanacearum CFBP2957No Burkholderia gladioli BSR3No Acidovorax citrulli AAC00-1No Acidovorax avenae subsp. avenae ATCC 19860No Achromobacter xylosoxidans No Methylovorus sp. MP688No Candidatus Puniceispirillum marinum IMCC1322No alpha proteobacterium HIMB5 No Wolbachia endosymbiont of Culex quinquefasciatus PelNo Orientia tsutsugamushi str. BoryongNo Rickettsia bellii OSU 85-389No Rickettsia philipii str. 364DNo Rickettsia heilongjiangensis 054No Rickettsia peacockii str. RusticNo Rickettsia felis URRWXCal2No Rickettsia parkeri str. PortsmouthNo Rickettsia massiliae MTU5No Rickettsia africae ESF-5No Rickettsia rhipicephali str. 3-7-female6-CWPPNo Rickettsia montanensis str. OSU 85-930No Candidatus Rickettsia amblyommii str. GAT-30VNo Rickettsia australis str. CutlackNo Rickettsia akari str. HartfordNo Rickettsia rickettsii str. 'Sheila Smith'No Rickettsia conorii str. Malish 7No Gallibacterium anatis UMN179No Vibrio furnissii NCTC 11218No Ferrimonas balearica DSM 9799No Pseudoalteromonas atlantica T6cNo Glaciecola sp. 4H-3-7+YE-5No Marinomonas mediterranea MMB-1No Coxiella burnetii Dugway 5J108-111No Legionella longbeachae NSW150No Legionella pneumophila str. CorbyNo Pantoea vagans C9-1No Erwinia sp. Ejp617No Erwinia pyrifoliae Ep1/96No Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)No Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594No Escherichia fergusonii ATCC 35469No Pseudomonas sp. TKP No Pseudomonas brassicacearum subsp. brassicacearum NFM421No Pseudomonas syringae pv. tomato str. DC3000No Pseudomonas sp. VLB120 No Psychrobacter sp. PRwf-1No Psychrobacter cryohalolentis K5No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frogNo Drosophila melanogaster FlyBase 5.12 - Fruit flyNo Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquitoNo Ascaris suum Victoria/Ghent No Caenorhabditis elegans WormBase WS218 - RoundwormNo Cryptococcus neoformans var. grubii H99 No Cryptococcus neoformans B-3501A No Cryptococcus neoformans JEC21 No Paracoccidioides brasiliensis Pb01 No Paracoccidioides brasiliensis Pb03 No Coccidioides posadasii str. Silveira No Coccidioides immitis RMSCC 3703 No Coccidioides immitis RMSCC 2394 No Coccidioides immitis H538.4 No Ajellomyces dermatitidis ER-3 No Histoplasma capsulatum H143No Histoplasma capsulatum H88No Histoplasma capsulatum G186ARNo Aspergillus fumigatus A1163 No Candida albicans WO-1 No Saccharomyces cerevisiae UC5No Saccharomyces cerevisiae PW5No Saccharomyces cerevisiae FL100No Saccharomyces cerevisiae CLIB324No Saccharomyces cerevisiae CBS7960No Saccharomyces cerevisiae YJM269No Saccharomyces cerevisiae T7No Saccharomyces cerevisiae FostersBNo Saccharomyces cerevisiae FostersONo Saccharomyces cerevisiae VL3No Saccharomyces cerevisiae Vin13No Saccharomyces cerevisiae LalvinQA23No Saccharomyces cerevisiae AWRI796No Saccharomyces cerevisiae Sigma1278bNo Saccharomyces cerevisiae W303No Saccharomyces cerevisiae JAY291No Saccharomyces cerevisiae AWRI1631No Saccharomyces cerevisiae YPS163No Saccharomyces cerevisiae M22No Saccharomyces cerevisiae T73No Saccharomyces cerevisiae CLIB215No Saccharomyces cerevisiae Y10No Saccharomyces cerevisiae YJM789 No Saccharomyces cerevisiae YJM789No Saccharomyces cerevisiae RM11-1aNo Saccharomyces cerevisiae RM11-1a No Saccharomyces cerevisiae SGD - Baker's yeastNo Schizosaccharomyces pombe 972h- No Batrachochytrium dendrobatidis JEL423 No Batrachochytrium dendrobatidis JAM81 No Theobroma cacao Matina 1-6 v0.9 - CacaoNo Hordeum vulgare 22 - Domesticated barleyNo Oryza sativa ssp. Indica - Long-grained riceNo Trypanosoma brucei Lister 427 v4.1 No Neospora caninum Nc-Liverpool 6.2 No Plasmodium falciparum HB3 No Plasmodium falciparum Dd2 No Chamaesiphon minutus PCC 6605No Oscillatoria nigro-viridis PCC 7112No Oscillatoria acuminata PCC 6304No Cyanothece sp. PCC 7822No Cylindrospermum stagnale PCC 7417No Nocardiopsis alba ATCC BAA-2165No Streptomyces rapamycinicus NRRL 5491No Streptomyces fulvissimus DSM 40593No Streptomyces venezuelae ATCC 10712No Streptomyces collinus Tu 365No Saccharothrix espanaensis DSM 44229No Amycolatopsis mediterranei RBNo Amycolatopsis mediterranei S699No Amycolatopsis mediterranei S699No Actinoplanes friuliensis DSM 7358No Corynebacterium glutamicum SCgG2No Corynebacterium glutamicum SCgG1No Clostridium thermocellum DSM 1313No Faecalibacterium prausnitzii L2-6No Clostridium saccharolyticum Clostridium cf. saccharolyticum K10No Roseburia intestinalis XB6B4No Clostridium saccharoperbutylacetonicum N1-4(HMT)No Clostridium tetani genome 12124569No Clostridium botulinum BKT015925No Clostridium botulinum F str. 230613No Clostridium botulinum F str. LangelandNo Clostridium botulinum B1 str. OkraNo Clostridium botulinum A str. HallNo Clostridium botulinum A str. ATCC 19397No Enterococcus faecalis V583No Lactobacillus plantarum 16No Lactobacillus plantarum ZJ316No Lactobacillus plantarum subsp. plantarum P-8No Lactobacillus plantarum WCFS1No Lactobacillus acidophilus La-14No Lactobacillus acidophilus NCFMNo Lactococcus garvieae Lg2No Lactococcus lactis subsp. cremoris KW2No Lactococcus lactis subsp. cremoris UC509.9No Streptococcus equi subsp. zooepidemicusNo Streptococcus pneumoniae AP200No Streptococcus pneumoniae D39No Streptococcus pneumoniae R6No Paenibacillus mucilaginosus KNP414No Paenibacillus mucilaginosus K02No Paenibacillus polymyxa CR1No Paenibacillus polymyxa SC2No Paenibacillus polymyxa E681No Listeria monocytogenes EGD sequenceNo Listeria monocytogenes N53-1No Listeria monocytogenes La111No Listeria monocytogenes serotype 4b str. LL195No Listeria monocytogenes 07PF0776No Listeria monocytogenes M7No Listeria monocytogenes J1-220No Listeria monocytogenes J1816No Listeria monocytogenes SLCC5850No Listeria monocytogenes ATCC 19117No Listeria monocytogenes L312No Listeria monocytogenes SLCC2479No Listeria monocytogenes SLCC2378No Listeria monocytogenes serotype 1/2b str. SLCC2755No Listeria monocytogenes serotype 1/2c str. SLCC2372No Listeria monocytogenes serotype 7 str. SLCC2482No Listeria monocytogenes L99No Listeria monocytogenes HCC23No Listeria monocytogenes 10403SNo Listeria monocytogenes J0161No Listeria monocytogenes Finland 1998No Listeria monocytogenes FSL R2-561No Listeria monocytogenes serotype 4b str. F2365No Listeria monocytogenes EGD-eNo Bacillus toyonensis BCT-7112No Bacillus thuringiensis BMB171No Echinicola vietnamensis DSM 17526No Emticicia oligotrophica DSM 17448No Prevotella sp. oral taxon 299 str. F0039No Bacteroides xylanisolvens XB1ANo Bacteroides fragilis 638RNo Bacteroides fragilis NCTC 9343No Nonlabens dokdonensis DSW-6No Psychroflexus torquis ATCC 700755No Singulisphaera acidiphila DSM 18658No Leptospira interrogans serovar Lai str. 56601No Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130No Geobacter sp. M18No Geobacter sulfurreducens PCANo Sorangium cellulosum So0157-2No Myxococcus stipitatus DSM 14675No Pandoraea pnomenusa 3kgmNo Ralstonia solanacearum FQY_4No Ralstonia solanacearum Po82No Ralstonia solanacearum PSI07No Ralstonia solanacearum CMR15No Ralstonia solanacearum GMI1000No Octadecabacter arcticus 238No Wolbachia endosymbiont strain TRS of Brugia malayiNo Wolbachia endosymbiont of Drosophila simulans wHaNo Wolbachia endosymbiont of Drosophila simulans wNoNo Orientia tsutsugamushi str. IkedaNo Rickettsia bellii RML369-CNo Rickettsia massiliae str. AZT80No Rickettsia rickettsii str. BrazilNo Rickettsia rickettsii str. ColombiaNo Rickettsia rickettsii str. Hlp#2No Bradyrhizobium oligotrophicum S58No Shewanella baltica OS223No Alcanivorax dieselolei B5No Coxiella burnetii CbuK_Q154No Coxiella burnetii CbuG_Q212No Coxiella burnetii RSA 493No Legionella pneumophila str. ParisNo Legionella pneumophila str. LensNo Legionella pneumophila subsp. pneumophila LPE509No Legionella pneumophila subsp. pneumophila str. Thunder BayNo Legionella pneumophila subsp. pneumophila str. Philadelphia 1No Legionella pneumophila subsp. pneumophilaNo Legionella pneumophila subsp. pneumophilaNo Legionella pneumophila subsp. pneumophila ATCC 43290No Legionella pneumophila 2300/99 AlcoyNo Erwinia pyrifoliae DSM 12163No Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736No Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992No Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633No Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050No Salmonella enterica subsp. enterica serovar Enteritidis str. P125109No Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67No Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853No Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921No Salmonella enterica subsp. enterica serovar Typhimurium str. U288No Salmonella enterica subsp. enterica serovar Typhimurium str. 798No Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1No Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74No Salmonella enterica subsp. enterica serovar Typhimurium str. T000240No Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2No Salmonella enterica subsp. enterica serovar Typhimurium str. D23580No Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344No Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SNo Salmonella enterica subsp. enterica serovar Typhimurium str. LT2No Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104No Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12No Salmonella enterica subsp. enterica serovar Typhi str. Ty21aNo Salmonella enterica subsp. enterica serovar Typhi str. CT18No Salmonella enterica subsp. enterica serovar Typhi str. Ty2No Salmonella enterica serovar Bovismorbificans genomicsNo Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189No Salmonella enterica subsp. enterica serovar Agona str. 24249No Salmonella enterica subsp. enterica serovar Agona str. SL483No Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1No Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601No Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150No Salmonella enterica subsp. enterica serovar Pullorum str. S06004No Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67No Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078No Salmonella enterica subsp. enterica serovar Thompson str. RM6836No Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91No Escherichia coli O83:H1 str. NRG 857CNo Escherichia coli LF82No Pseudomonas syringae pv. phaseolicola 1448ANo Pseudomonas syringae pv. syringae B728aNo Pseudomonas putida H8234No Pseudomonas putida GB-1No Pseudomonas fluorescens F113No Homo sapiens 69_37 - HumanNo Pan troglodytes 69_2.1.4 - ChimpanzeeNo Gorilla gorilla 69_3.1 - Western gorillaNo Pongo abelii 69_2 - Sumatran orangutanNo Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbonNo Macaca mulatta 69_1 - Rhesus monkeyNo Callithrix jacchus 69_3.2.1 - White-tufted-ear marmosetNo Otolemur garnettii 69_3 - Small-eared galagoNo Tarsius syrichta 69_1 No Microcebus murinus 69_1 - Gray mouse lemurNo Rattus norvegicus 69_3.4 - Norway ratNo Mus musculus 69_38 - House mouseNo Dipodomys ordii 69_1 - Ord's kangaroo ratNo Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrelNo Cavia porcellus 69_3 - Domestic guinea pigNo Oryctolagus cuniculus 69_2 - RabbitNo Ochotona princeps 69 - American pikaNo Tupaia belangeri 69 - Northern tree shrewNo Sus scrofa 69_10.2 - PigNo Bos taurus 69_3.1 - CattleNo Vicugna pacos 69_1 - AlpacaNo Tursiops truncatus 69_1 - Bottlenose dolphinNo Mustela putorius furo 69_1.0 - Domestic ferretNo Ailuropoda melanoleuca 69_1 - Giant pandaNo Canis familiaris 69_3.1 - DogNo Felis catus 69 - Domestic catNo Equus caballus 69_2 - HorseNo Myotis lucifugus 69_2.0 - Little brown batNo Pteropus vampyrus 69_1 - Large flying foxNo Sorex araneus 69_1 - European shrewNo Erinaceus europaeus 69 - Western European hedgehogNo Procavia capensis 69_1 - Cape rock hyraxNo Loxodonta africana 69_3 - African savanna elephantNo Echinops telfairi 69 - Small Madagascar hedgehogNo Dasypus novemcinctus 69_2 - Nine-banded armadilloNo Choloepus hoffmanni 69_1 - Hoffmann's two-fingered slothNo Macropus eugenii 69_1.0 - Tammar wallabyNo Sarcophilus harrisii 69_7.0 - Tasmanian devilNo Monodelphis domestica 69_5 - Gray short-tailed opossumNo Ornithorhynchus anatinus 69_5 - PlatypusNo Petromyzon marinus 69_7.0 - Sea lampreyNo Meleagris gallopavo 69_2 - TurkeyNo Gallus gallus 69_2 - ChickenNo Taeniopygia guttata 69_3.2.4 - Zebra finchNo Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtleNo Anolis carolinensis 69_2.0 - Green anoleNo Xenopus tropicalis 69_4.2 - Tropical clawed frogNo Latimeria chalumnae 69_1 - CoelacanthNo Gadus morhua 69_1 - Atlantic codNo Tetraodon nigroviridis 69_8 - Spotted green pufferfishNo Takifugu rubripes 69_4 - TorafuguNo Gasterosteus aculeatus 69_1 - Three-spined sticklebackNo Oryzias latipes 69_1 - Japanese medakaNo Xiphophorus maculatus 69_4.4.2 - Southern platyfishNo Oreochromis niloticus 69_1.0 - Nile tilapiaNo Danio rerio 69_9 - ZebrafishNo Ciona savignyi 69_2.0 - Pacific transparent sea squirtNo Ciona intestinalis 69 - Vase tunicateNo Drosophila melanogaster 69_5 - Fruit flyNo Caenorhabditis elegans 69_215 - RoundwormNo Saccharomyces cerevisiae 69_4 - Baker's yeastNo Arabidopsis thaliana 10 - Thale cressNo Homo sapiens 75_37 - HumanNo Homo sapiens No Mus musculus 63_37 (longest transcript per gene) - House mouseNo Heliconius numata No Loa loa v3.3 - Eye wormNo Wuchereria bancrofti v1.0 - Agent of lymphatic filariasisNo Brugia malayi v1.0 - Agent of lymphatic filariasisNo Moniliophthora perniciosa FA553 No Encephalitozoon intestinalis No Encephalitozoon cuniculi No Pinus sylvestris No Picea sitchensis No Lotus japonicus No Malus x domestica - AppleNo Ricinus communis No Nicotiana benthamiana 0.4.4 No Solanum pimpinellifolium A-1.0 - Currant tomatoNo Solanum lycopersicum v2.3 - TomatoNo Phoenix dactylifera No Wolbachia endosymbiont of Brugia malayi v1.0 No 1_Upper_euphotic (meta-genome)No 2_Base_of_chrolophyll_max (meta-genome)No 3_Below_base_of_euphotic (meta-genome)No 4_Deep_abyss (meta-genome)No 5_Below_upper_mesopelagic (meta-genome)No 6_Upper_euphotic (meta-genome)No 7_Oxygen_minimum_layer (meta-genome)No Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)No Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)No Air microbial communities Singapore indoor air filters 2 (meta-genome)No Atta cephalotes fungus garden (ACEF) (meta-genome)No Combined (meta-genome)No Cyphomyrmex longiscapus fungus garden (meta-genome)No Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)No Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)No Dump bottom (Dump bottom) (meta-genome)No Dump top (Dump top) (meta-genome)No Endophytic microbiome from Rice (meta-genome)No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)No Freshwater propionate enrichment of Brocadia fulgida (meta-genome)No Fungus garden combined (combined) (meta-genome)No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes No Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)No Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)No Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)No Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) No Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)No Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) No Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) No Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)No Mouse Gut Community lean1 (meta-genome)No Mouse Gut Community lean2 (meta-genome)No Mouse Gut Community lean3 (meta-genome)No NCBI 2017_08 genome No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)No Protozoadb 2010_08 (Protozoadb)No simMC - Simulated Medium Complexity Metagenome (meta-genome)No Sludge/Australian, Phrap Assembly (meta-genome)No Soil microbial communities from Minnesota Farm (meta-genome)No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)No STRING v9.0.5 (STRING)No Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)No Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) No Termite Protist Endosymbiont Community (meta-genome)No Uniprot 2018_03 genome No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)No Global Ocean Sampling Expedition (GOS) No NCBI plasmid sequences (Plasmids) No NCBI viral sequences (Viral) No PDB chains (SCOP 1.75 ) (PDB) No Protein Data Bank (all PDB sequenc) No SCOP2 SCOPe CATH ECOD (all domain sequ) No TargetDB No The Salmonella enterica Pan-genome (meta-genome) No UniProt ALL (only advised for small superfamilies)
