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Home > SCOP hierarchy > Thiamin pyrophosphokinase, substrate-binding domain > Alignments for region 178-234 from WP_004218696.1.22654

Thiamin pyrophosphokinase, substrate-binding domain alignments

These alignments are sequences aligned to the 0039001 model.

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Alignments

The numbers along the top are the segment numbers of the HMM states, and each sequence is seperately aligned to the model.
The first sequence is the seed the model was built from.
Upper case letters are aligned, lower case letters are insertions, '-' signifies a deletion and '.' is nothing.

                                      10        20        30        40        50        60        70
                                       |         |         |         |         |         |         |
d1ig3a1                      .DSLIYLLQPGKHRLHVDTGMEGSWCGLIPVGQPCNQVTTTGLKWNLTNDVLGFGTLVSTSNTYDGSGLVT
WP_004218696.1.22654:178-234 t----------------------QYVSVFAHSDSVRDVTERGLKYRLDHATLSNLQVNGLSNEFIDGDAAQ


                                     80      
                                      |      
d1ig3a1                      VETDHPLLWTMAIK-s
WP_004218696.1.22654:178-234 IAVGGGI--------a


Statistics on alignment.	Save alignment.

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Refine alignments

Sophisticated options are available for refining alignments:

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Try aligning to a different model
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Add your sequences to the alignment:

Members of the same:	including
Include all superfamily members:	, or just those assigned by the selected model:
Initial T99 seed sequence:	NoYes

You may enter many sequences at once using FASTA format:

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Model: 0039001 (list models)

Initial SAMT99 seed:
Alignment:

Display Options:

Output in FASTA-like format:	NoYes
Output column indices:	NoYes
Sequence index (number) on each line:	NoYes

Max number of insertions shown:	(0 does not show insertions)
Characters per line:
Character to show inserts:
Maximum number of sequences:
Exclude sequences shorter than:	residues

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Add alignments from genomes

Select below additional genomes you would like to see alignments for, then click on 'Re-Submit'. The genome assignments will be added to this page.

Select to display	Genome
NoYes	Canis familiaris 58 (pseudogenes) - Dog
NoYes	Homo sapiens 76_38 - Human
NoYes	Pan troglodytes 76_2.1.4 - Chimpanzee
NoYes	Gorilla gorilla 76_3.1 - Western gorilla
NoYes	Pongo abelii 76_2 - Sumatran orangutan
NoYes	Tarsius syrichta 76_1
NoYes	Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbon
NoYes	Papio anubis 76 - Olive baboon
NoYes	Macaca mulatta 76_1 - Rhesus monkey
NoYes	Callithrix jacchus 76_3.2.1 - White-tufted-ear marmoset
NoYes	Otolemur garnettii 76_3 - Small-eared galago
NoYes	Microcebus murinus 76_1 - Gray mouse lemur
NoYes	Physcomitrella patens subsp. patens 22
NoYes	Rattus norvegicus 76_5.0 - Norway rat
NoYes	Mus musculus 76_38 - House mouse
NoYes	Dipodomys ordii 76_1 - Ord's kangaroo rat
NoYes	Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrel
NoYes	Heterocephalus glaber v1.7-2 - Naked mole-rat
NoYes	Cavia porcellus 76_3 - Domestic guinea pig
NoYes	Oryctolagus cuniculus 76_2 - Rabbit
NoYes	Ochotona princeps 76 - American pika
NoYes	Tupaia belangeri 76 - Northern tree shrew
NoYes	Sus scrofa 76_10.2 - Pig
NoYes	Bos taurus 76_3.1 - Cattle
NoYes	Ovis aries 76_3.1 - Sheep
NoYes	Vicugna pacos 76_1 - Alpaca
NoYes	Tursiops truncatus 76_1 - Bottlenose dolphin
NoYes	Mustela putorius furo 76_1.0 - Domestic ferret
NoYes	Ailuropoda melanoleuca 76_1 - Giant panda
NoYes	Canis familiaris 76_3.1 - Dog
NoYes	Felis catus 76_6.2 - Domestic cat
NoYes	Equus caballus 76_2 - Horse
NoYes	Myotis lucifugus 76_2.0 - Little brown bat
NoYes	Pteropus vampyrus 76_1 - Large flying fox
NoYes	Sorex araneus 76_1 - European shrew
NoYes	Erinaceus europaeus 76 - Western European hedgehog
NoYes	Loxodonta africana 76_3 - African savanna elephant
NoYes	Echinops telfairi 76 - Small Madagascar hedgehog
NoYes	Dasypus novemcinctus 76_2 - Nine-banded armadillo
NoYes	Choloepus hoffmanni 76_1 - Hoffmann's two-fingered sloth
NoYes	Macropus eugenii 76_1.0 - Tammar wallaby
NoYes	Sarcophilus harrisii 76_7.0 - Tasmanian devil
NoYes	Monodelphis domestica 76_5 - Gray short-tailed opossum
NoYes	Ornithorhynchus anatinus 76_5 - Platypus
NoYes	Petromyzon marinus 76_7.0 - Sea lamprey
NoYes	Meleagris gallopavo 76_2 - Turkey
NoYes	Gallus gallus 76_4 - Chicken
NoYes	Anas platyrhynchos 76_1.0 - Mallard
NoYes	Taeniopygia guttata 76_3.2.4 - Zebra finch
NoYes	Ficedula albicollis 76_1.0 - Collared flycatcher
NoYes	Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtle
NoYes	Anolis carolinensis 76_2.0 - Green anole
NoYes	Xenopus tropicalis 76_4.2 - Tropical clawed frog
NoYes	Latimeria chalumnae 76_1 - Coelacanth
NoYes	Lepisosteus oculatus 76 - Spotted gar
NoYes	Gadus morhua 76_1 - Atlantic cod
NoYes	Tetraodon nigroviridis 76_8 - Spotted green pufferfish
NoYes	Takifugu rubripes 76_4 - Torafugu
NoYes	Gasterosteus aculeatus 76_1 - Three-spined stickleback
NoYes	Xiphophorus maculatus 76_4.4.2 - Southern platyfish
NoYes	Poecilia formosa 76 - Amazon molly
NoYes	Oreochromis niloticus 76_1.0 - Nile tilapia
NoYes	Astyanax mexicanus 76 - Mexican tetra
NoYes	Danio rerio 76_9 - Zebrafish
NoYes	Oikopleura dioica
NoYes	Strongylocentrotus purpuratus v3.1 - Purple sea urchin
NoYes	Adineta vaga
NoYes	Octopus bimaculoides 280
NoYes	Crassostrea gigas 22 - Pacific oyster
NoYes	Lottia gigantea - Owl limpet
NoYes	Helobdella robusta
NoYes	Capitella sp. I
NoYes	Danaus plexippus OGS1.0 - Monarch butterfly
NoYes	Heliconius melpomene - Postman butterfly
NoYes	Bombyx mori - Domestic silkworm
NoYes	Nasonia vitripennis - Jewel wasp
NoYes	Harpegnathos saltator v3.3 - Jerdon's jumping ant
NoYes	Linepithema humile v1.1 - Argentine ant
NoYes	Pogonomyrmex barbatus v1.2 - Red harvester ant
NoYes	Solenopsis invicta v.2.2.3 - Red fire ant
NoYes	Acromyrmex echinatior v3.8 - Panamanian leafcutter ant
NoYes	Atta cephalotes v1.1
NoYes	Camponotus floridanus v3.3 - Florida carpenter ant
NoYes	Lucilia cuprina - Australian sheep blowfly
NoYes	Drosophila grimshawi 1.3
NoYes	Drosophila willistoni 1.3
NoYes	Drosophila pseudoobscura 2.13
NoYes	Drosophila persimilis 1.3
NoYes	Drosophila suzukii
NoYes	Drosophila yakuba 1.3
NoYes	Drosophila simulans 1.3
NoYes	Drosophila sechellia 1.3
NoYes	Drosophila melanogaster 76_5 - Fruit fly
NoYes	Drosophila erecta 1.3
NoYes	Drosophila ananassae 1.3
NoYes	Drosophila virilis 1.2
NoYes	Drosophila mojavensis 1.3
NoYes	Megaselia scalaris 22
NoYes	Aedes aegypti 55 - Yellow fever mosquito
NoYes	Culex pipiens quinquefasciatus - Southern house mosquito
NoYes	Anopheles darlingi 22 - American malaria mosquito
NoYes	Anopheles gambiae 49_3j - African malaria mosquito
NoYes	Tribolium castaneum 3.0 - Red flour beetle
NoYes	Pediculus humanus corporis - Human body louse
NoYes	Acyrthosiphon pisum - Pea aphid
NoYes	Rhodnius prolixus 22
NoYes	Daphnia pulex - Common water flea
NoYes	Strigamia maritima 22
NoYes	Pristionchus pacificus
NoYes	Meloidogyne hapla
NoYes	Onchocerca volvulus 22
NoYes	Brugia malayi WS250 - Agent of lymphatic filariasis
NoYes	Caenorhabditis japonica
NoYes	Caenorhabditis remanei
NoYes	Caenorhabditis elegans 76_235 - Roundworm
NoYes	Caenorhabditis briggsae 2
NoYes	Trichinella spiralis 22
NoYes	Hymenolepis microstoma
NoYes	Echinococcus multilocularis
NoYes	Echinococcus granulosus
NoYes	Schistosoma mansoni
NoYes	Mnemiopsis leidyi - Sea walnut
NoYes	Thelohanellus kitauei
NoYes	Acropora digitifera v1.0
NoYes	Nematostella vectensis 1.0 - Starlet sea anemone
NoYes	Hydra vulgaris
NoYes	Amphimedon queenslandica
NoYes	Trichoplax adhaerens
NoYes	Proterospongia sp. ATCC 50818
NoYes	Monosiga brevicollis
NoYes	Capsaspora owczarzaki ATCC 30864
NoYes	Conidiobolus coronatus NRRL28638 v1.0
NoYes	Mortierella verticillata NRRL 6337
NoYes	Phycomyces blakesleeanus
NoYes	Rhizopus oryzae RA 99-880
NoYes	Mucor circinelloides
NoYes	Rhizomucor miehei CAU432
NoYes	Sporisorium reilianum 22
NoYes	Ustilago maydis
NoYes	Mixia osmundae IAM 14324 v1.0
NoYes	Cronartium quercuum f. sp. fusiforme G11 v1.0
NoYes	Puccinia graminis f. sp. tritici CRL 75-36-700-3
NoYes	Melampsora laricis-populina
NoYes	Rhodotorula graminis WP1 v1.0
NoYes	Sporobolomyces roseus IAM 13481
NoYes	Microbotryum violaceum 22
NoYes	Wallemia sebi v1.0
NoYes	Sphaerobolus stellatus v1.0
NoYes	Piloderma croceum F 1598 v1.0
NoYes	Serpula lacrymans var. lacrymans S7.9
NoYes	Hydnomerulius pinastri v2.0
NoYes	Paxillus rubicundulus Ve08.2h10 v1.0
NoYes	Pisolithus microcarpus 441 v1.0
NoYes	Pisolithus tinctorius Marx 270 v1.0
NoYes	Scleroderma citrinum Foug A v1.0
NoYes	Coprinopsis cinerea okayama7 130 v3
NoYes	Pleurotus ostreatus - Oyster mushroom
NoYes	Amanita thiersii Skay4041 v1.0
NoYes	Amanita muscaria Koide v1.0 - Fly agaric
NoYes	Galerina marginata v1.0
NoYes	Hebeloma cylindrosporum h7 v2.0
NoYes	Laccaria bicolor S238N-H82
NoYes	Agaricus bisporus var. bisporus
NoYes	Schizophyllum commune
NoYes	Stereum hirsutum FP-91666 SS1 v1.0
NoYes	Heterobasidion annosum
NoYes	Gloeophyllum trabeumv1.0
NoYes	Punctularia strigosozonata v1.0
NoYes	Sebacina vermifera MAFF 305830 v1.0
NoYes	Fomitiporia mediterranea v1.0
NoYes	Postia placenta
NoYes	Wolfiporia cocos MD-104 SS10 v1.0
NoYes	Fomitopsis pinicolav1.0
NoYes	Fomitopsis pinicola FP-58527 SS1 v3.0
NoYes	Phanerochaete chrysosporium RP-78 2.1
NoYes	Dichomitus squalens
NoYes	Trametes versicolor v1.0
NoYes	Tremella mesenterica - Witches' butter
NoYes	Daldinia eschscholzii EC12 v1.0
NoYes	Apiospora montagnei NRRL 25634 v1.0
NoYes	Magnaporthe poae ATCC 64411 22
NoYes	Magnaporthe grisea 70-15
NoYes	Podospora anserina
NoYes	Sporotrichum thermophile ATCC 42464
NoYes	Thielavia terrestris NRRL 8126
NoYes	Chaetomium globosum CBS 148.51
NoYes	Neurospora discreta FGSC 8579
NoYes	Neurospora crassa OR74A
NoYes	Cryphonectria parasitica - Chestnut blight fungus
NoYes	Verticillium albo-atrum VaMs.102
NoYes	Verticillium dahliae VdLs.17
NoYes	Acremonium alcalophilumv 1.0
NoYes	Glomerella graminicola 22
NoYes	Fusarium graminearum
NoYes	Nectria haematococca mpVI
NoYes	Fusarium oxysporum f. sp. lycopersici 4286
NoYes	Fusarium verticillioides 7600
NoYes	Trichoderma asperellum CBS 433.97 v1.0
NoYes	Trichoderma atroviride
NoYes	Trichoderma citrinoviride v1.0
NoYes	Trichoderma reesei 1.2
NoYes	Trichoderma virens Gv29-8
NoYes	Trichoderma harzianum CBS 226.95 v1.0
NoYes	Amorphotheca resinae v1.0 - Creosote fungus
NoYes	Botrytis cinerea B05.10
NoYes	Sclerotinia sclerotiorum
NoYes	Blumeria graminis 22
NoYes	Didymella exigua CBS 183.55 v1.0
NoYes	Leptosphaeria maculans 22
NoYes	Setosphaeria turcica v1.0
NoYes	Cochliobolus miyabeanus ATCC 44560 v1.0
NoYes	Cochliobolus victoriae FI3 v1.0
NoYes	Cochliobolus carbonum 26-R-13 v1.0
NoYes	Cochliobolus lunatus m118 v2.0
NoYes	Pyrenophora teres f. teres 22
NoYes	Pyrenophora tritici-repentis
NoYes	Stagonospora nodorum
NoYes	Mycosphaerella graminicola IPO323
NoYes	Microsporum gypseum
NoYes	Zasmidium cellare ATCC 36951 v1.0
NoYes	Dothistroma septosporum
NoYes	Septoria musiva v1.0
NoYes	Mycosphaerella fijiensis CIRAD86
NoYes	Aureobasidium pullulans var. subglaciale EXF-2481 v1.0
NoYes	Paracoccidioides brasiliensis Pb18
NoYes	Coccidioides posadasii RMSCC 3488
NoYes	Coccidioides immitis RS
NoYes	Ajellomyces dermatitidis SLH14081
NoYes	Histoplasma capsulatum class NAmI strain WU24
NoYes	Microsporum canis CBS 113480
NoYes	Trichophyton equinum CBS 127.97
NoYes	Trichophyton verrucosum HKI 0517
NoYes	Arthroderma benhamiae CBS 112371
NoYes	Trichophyton tonsurans CBS 112818
NoYes	Trichophyton rubrum CBS 118892
NoYes	Uncinocarpus reesii 1704
NoYes	Aspergillus zonatus v1.0
NoYes	Penicillium chrysogenum Wisconsin 54-1255
NoYes	Penicillium chrysogenum v1.0
NoYes	Aspergillus acidus v1.0
NoYes	Aspergillus fumigatus Af293
NoYes	Aspergillus brasiliensis v1.0
NoYes	Aspergillus nidulans FGSC A4
NoYes	Aspergillus sydowii v1.0
NoYes	Aspergillus versicolor v1.0
NoYes	Aspergillus glaucus
NoYes	Aspergillus carbonarius ITEM 5010
NoYes	Neosartorya fischeri NRRL 181
NoYes	Aspergillus terreus NIH2624
NoYes	Aspergillus tubingensis v1.0
NoYes	Aspergillus wentii v1.0
NoYes	Aspergillus niger ATCC 1015
NoYes	Aspergillus flavus NRRL3357
NoYes	Aspergillus clavatus NRRL 1
NoYes	Penicillium marneffei ATCC 18224
NoYes	Tuber melanosporum Mel28 22
NoYes	Tuber melanosporum Vittad - Perigord truffle
NoYes	Hansenula polymorpha v2.0
NoYes	Dekkera bruxellensis CBS 2499 v2.0
NoYes	Pichia membranifaciensv1.0
NoYes	Candida tanzawaensis NRRL Y-17324 v1.0
NoYes	Candida dubliniensis CD36
NoYes	Candida tropicalis MYA-3404
NoYes	Candida parapsilosis
NoYes	Candida albicans SC5314
NoYes	Lodderomyces elongisporus NRRL YB-4239
NoYes	Babjeviella inositovora NRRL Y-12698 v1.0
NoYes	Pichia stipitis CBS 6054
NoYes	Candida guilliermondii ATCC 6260
NoYes	Hyphopichia burtonii NRRL Y-1933 v1.0
NoYes	Debaromyces hansenii
NoYes	Wickerhamomyces anomalus
NoYes	Pichia pastoris GS115
NoYes	Hanseniaspora valbyensis NRRL Y-1626 v1.1
NoYes	Yarrowia lipolytica CLIB122
NoYes	Candida lusitaniae ATCC 42720
NoYes	Metschnikowia bicuspidata NRRL YB-4993 v1.0
NoYes	Vanderwaltozyma polyspora DSM 70294
NoYes	Candida glabrata CBS138
NoYes	Kluyveromyces thermotolerans CBS 6340
NoYes	Lachancea kluyveri
NoYes	Kluyveromyces waltii
NoYes	Ashbya gossypii ATCC 10895
NoYes	Zygosaccharomyces rouxii
NoYes	Saccharomyces mikatae MIT
NoYes	Saccharomyces paradoxus MIT
NoYes	Saccharomyces cerevisiae 76 - Baker's yeast
NoYes	Saccharomyces bayanus MIT
NoYes	Kluyveromyces lactis
NoYes	Schizosaccharomyces cryophilus OY26 22
NoYes	Schizosaccharomyces octosporus yFS286
NoYes	Schizosaccharomyces japonicus yFS275
NoYes	Schizosaccharomyces pombe - Fission yeast
NoYes	Catenaria anguillulae PL171 v1.0
NoYes	Allomyces macrogynus ATCC 38327
NoYes	Spizellomyces punctatus DAOM BR117
NoYes	Dictyostelium discoideum
NoYes	Dictyostelium purpureum
NoYes	Entamoeba dispar 1.2
NoYes	Entamoeba invadens 1.2
NoYes	Entamoeba histolytica 1
NoYes	Selaginella moellendorffii
NoYes	Pinus taeda - Loblolly pine
NoYes	Picea abies - Norway spruce
NoYes	Eucalyptus grandis v201 - Rose gum
NoYes	Theobroma cacao B97-61/B2 v1 - Cacao
NoYes	Gossypium raimondii v221
NoYes	Citrus clementina v165
NoYes	Citrus sinensis v154 - Sweet orange
NoYes	Thellungiella halophila v173
NoYes	Brassica rapa Chiifu-401 1.2 - Field mustard
NoYes	Capsella rubella v183
NoYes	Arabidopsis lyrata - Lyrate rockcress
NoYes	Arabidopsis thaliana 10 - Thale cress
NoYes	Medicago truncatula - Barrel medic
NoYes	Phaseolus vulgaris v186 - String bean
NoYes	Glycine max v109 - Soybean
NoYes	Cucumis sativus v122 - Cucumber
NoYes	Fragaria vesca - Wild strawberry
NoYes	Malus domestica v196 - Apple
NoYes	Prunus persica v139 - Peach
NoYes	Linum usitatissimum v200 - Flax
NoYes	Manihot esculenta v147 - Cassava
NoYes	Populus trichocarpa v156 - Black cottonwood
NoYes	Vitis vinifera - Wine grape
NoYes	Mimulus guttatus v140 - Spotted monkey flower
NoYes	Solanum lycopersicum v.2.3 - Tomato
NoYes	Solanum tuberosum - Potato
NoYes	Actinidia chinensis Hongyang
NoYes	Aquilegia coerulea v195
NoYes	Triticum urartu 22
NoYes	Triticum aestivum 22 - Bread wheat
NoYes	Aegilops tauschii 22
NoYes	Brachypodium distachyon - Stiff brome
NoYes	Oryza barthii 22 - African wild rice
NoYes	Oryza meridionalis 22
NoYes	Oryza glumaepatula 22
NoYes	Oryza glaberrima - African rice
NoYes	Oryza punctata 22
NoYes	Oryza nivara 22
NoYes	Oryza brachyantha 22 - Malo sina
NoYes	Oryza sativa ssp. japonica 5.0 - Japanese rice
NoYes	Oryza sativa v193 - Rice
NoYes	Phyllostachys heterocyclavar. pubescens - Mosochiku
NoYes	Panicum virgatum v202 - Switchgrass
NoYes	Setaria italica v164 - Foxtail millet
NoYes	Zea mays subsp. mays - Maize
NoYes	Zea mays v181 - Maize
NoYes	Sorghum bicolor - Sorghum
NoYes	Musa balbisiana - Balbis banana
NoYes	Musa acuminata 22 - Wild Malaysian banana
NoYes	Amborella trichopoda 22
NoYes	Physcomitrella patens
NoYes	Coccomyxa subellipsoidea sp. C-169 v2
NoYes	Asterochloris sp. Cgr/DA1pho v1.0
NoYes	Chlorella variabilis sp. NC64A
NoYes	Chlorella vulgaris
NoYes	Volvox carteri f. nagariensis
NoYes	Volvox carteri v199
NoYes	Chlamydomonas reinhardtii 4.0
NoYes	Ostreococcus lucimarinus CCE9901
NoYes	Ostreococcus tauri
NoYes	Bathycoccus prasinos
NoYes	Micromonas sp. RCC299
NoYes	Micromonas pusilla CCMP1545 v3.0
NoYes	Cyanidioschyzon merolae strain 10D 22
NoYes	Cyanidioschyzon merolae
NoYes	Porphyridium purpureum 02_2012
NoYes	Thecamonas trahens ATCC 50062
NoYes	Bigelowiella natans CCMP2755 22
NoYes	Giardia lamblia 2.3
NoYes	Cyanophora paradoxa
NoYes	Leishmania mexicana 2.4
NoYes	Leishmania major strain Friedlin
NoYes	Leishmania infantum JPCM5 2.4
NoYes	Leishmania braziliensis MHOM/BR/75/M2904 2.4
NoYes	Trypanosoma vivax
NoYes	Trypanosoma cruzi strain CL Brener
NoYes	Trypanosoma congolense 2.4
NoYes	Trypanosoma brucei gambiense v4.1
NoYes	Trypanosoma brucei TREU927 v4.1
NoYes	Ectocarpus siliculosus
NoYes	Aureococcus anophagefferens
NoYes	Albugo laibachii 22
NoYes	Pythium iwayamai DAOM BR242034 22
NoYes	Pythium arrhenomanes ATCC 12531 22
NoYes	Pythium ultimum v1.7-2
NoYes	Pythium aphanidermatum DAOM BR444 22
NoYes	Pythium irregulare DAOM BR486 22
NoYes	Pythium vexans DAOM BR484 22
NoYes	Phytophthora ramorum 1.1 - Sudden oak death agent
NoYes	Phytophthora sojae 1.1
NoYes	Phytophthora infestans T30-4
NoYes	Phytophthora capsici
NoYes	Hyaloperonospora arabidopsidis 22
NoYes	Phaeodactylum tricornutumCCAP 1055/1
NoYes	Fragilariopsis cylindrus
NoYes	Perkinsus marinus ATCC 50983
NoYes	Paramecium tetraurelia
NoYes	Tetrahymena thermophila SB210 1
NoYes	Ichthyophthirius multifiliis strain G5
NoYes	Toxoplasma gondii ME49
NoYes	Toxoplasma gondii GT1
NoYes	Plasmodium falciparum 3D7
NoYes	Plasmodium vivax SaI-1 7.0
NoYes	Plasmodium knowlesi strain H
NoYes	Plasmodium yoelii ssp. yoelii 1
NoYes	Plasmodium chabaudi
NoYes	Plasmodium berghei ANKA
NoYes	Symbiodinium minutum clade B1 v1.2
NoYes	Trichomonas vaginalis
NoYes	Guillardia theta CCMP2712 v1.0
NoYes	Emiliania huxleyi CCMP1516
NoYes	Acholeplasma laidlawii PG-8A
NoYes	Thermobaculum terrenum ATCC BAA-798
NoYes	Anabaena variabilis ATCC 29413
NoYes	Nostoc sp. PCC 7120
NoYes	Mycoplasma leachii 99/014/6
NoYes	Mycoplasma capricolum subsp. capricolum ATCC 27343
NoYes	Mycoplasma putrefaciens KS1
NoYes	Cryptobacterium curtum DSM 15641
NoYes	Eggerthella sp. YY7918
NoYes	Eggerthella lenta DSM 2243
NoYes	Olsenella uli DSM 7084
NoYes	Atopobium parvulum DSM 20469
NoYes	Coriobacterium glomerans PW2
NoYes	Ilumatobacter coccineus
NoYes	Tropheryma whipplei TW08/27
NoYes	Gardnerella vaginalis 409-05
NoYes	Bifidobacterium animalis subsp. lactis Bl-04
NoYes	Bifidobacterium dentium Bd1
NoYes	Bifidobacterium bifidum S17
NoYes	Bifidobacterium adolescentis ATCC 15703
NoYes	Mobiluncus curtisii ATCC 43063
NoYes	Caldilinea aerophila DSM 14535 = NBRC 104270
NoYes	Anaerolinea thermophila UNI-1
NoYes	Herpetosiphon aurantiacus DSM 785
NoYes	Roseiflexus sp. RS-1
NoYes	Roseiflexus castenholzii DSM 13941
NoYes	Chloroflexus sp. MS-G
NoYes	Chloroflexus sp. Y-400-fl
NoYes	Chloroflexus aggregans DSM 9485
NoYes	Chloroflexus aurantiacus J-10-fl
NoYes	Meiothermus ruber DSM 1279
NoYes	Anaerococcus prevotii DSM 20548
NoYes	Finegoldia magna ATCC 29328
NoYes	Acidaminococcus intestini RyC-MR95
NoYes	Acidaminococcus fermentans DSM 20731
NoYes	Selenomonas sputigena ATCC 35185
NoYes	Selenomonas ruminantium subsp. lactilytica TAM6421
NoYes	Natranaerobius thermophilus JW/NM-WN-LF
NoYes	Symbiobacterium thermophilum IAM 14863
NoYes	Clostridium clariflavum DSM 19732
NoYes	Eubacterium siraeum
NoYes	Clostridium cellulolyticum H10
NoYes	Clostridium thermocellum ATCC 27405
NoYes	Ethanoligenens harbinense YUAN-3
NoYes	Ruminococcus sp.
NoYes	Ruminococcus bromii
NoYes	Ruminococcus albus 7
NoYes	Thermaerobacter marianensis DSM 12885
NoYes	Oscillibacter valericigenes Sjm18-20
NoYes	butyrate-producing bacterium SS3/4
NoYes	butyrate-producing bacterium SM4/1
NoYes	Thermincola potens JR
NoYes	Pelotomaculum thermopropionicum SI
NoYes	Desulfosporosinus acidiphilus SJ4
NoYes	Desulfosporosinus orientis DSM 765
NoYes	Syntrophobotulus glycolicus DSM 8271
NoYes	Desulfitobacterium hafniense Y51
NoYes	Desulfitobacterium dehalogenans ATCC 51507
NoYes	Desulfotomaculum reducens MI-1
NoYes	Desulfotomaculum acetoxidans DSM 771
NoYes	Desulfotomaculum ruminis DSM 2154
NoYes	Acetobacterium woodii DSM 1030
NoYes	Eubacterium eligens ATCC 27750
NoYes	Eubacterium limosum KIST612
NoYes	Clostridium difficile 630
NoYes	Clostridium sticklandii DSM 519
NoYes	Filifactor alocis ATCC 35896
NoYes	Clostridium saccharolyticum WM1
NoYes	Clostridium phytofermentans ISDg
NoYes	Clostridium lentocellum DSM 5427
NoYes	[Ruminococcus] obeum
NoYes	[Ruminococcus] torques
NoYes	Eubacterium rectale M104/1
NoYes	Eubacterium rectale ATCC 33656
NoYes	Coprococcus sp. ART55/1
NoYes	Roseburia hominis A2-183
NoYes	Roseburia intestinalis
NoYes	Butyrivibrio proteoclasticus B316
NoYes	Butyrivibrio fibrisolvens
NoYes	Syntrophomonas wolfei subsp. wolfei str. Goettingen
NoYes	Alkaliphilus oremlandii OhILAs
NoYes	Alkaliphilus metalliredigens QYMF
NoYes	Candidatus Arthromitus sp. SFB-mouse-Japan
NoYes	Clostridium sp. BNL1100
NoYes	Clostridium novyi NT
NoYes	Clostridium ljungdahlii DSM 13528
NoYes	Clostridium tetani E88
NoYes	Clostridium perfringens ATCC 13124
NoYes	Clostridium cellulovorans 743B
NoYes	Clostridium botulinum A str. ATCC 3502
NoYes	Clostridium acetobutylicum ATCC 824
NoYes	Mahella australiensis 50-1 BON
NoYes	Thermosediminibacter oceani DSM 16646
NoYes	Caldicellulosiruptor obsidiansis OB47
NoYes	Caldicellulosiruptor kronotskyensis 2002
NoYes	Caldicellulosiruptor hydrothermalis 108
NoYes	Caldicellulosiruptor owensensis OL
NoYes	Caldicellulosiruptor lactoaceticus 6A
NoYes	Caldicellulosiruptor kristjanssonii 177R1B
NoYes	Caldicellulosiruptor saccharolyticus DSM 8903
NoYes	Caldicellulosiruptor bescii DSM 6725
NoYes	Thermoanaerobacterium xylanolyticum LX-11
NoYes	Thermoanaerobacterium thermosaccharolyticum DSM 571
NoYes	Tepidanaerobacter acetatoxydans Re1
NoYes	Thermoanaerobacter tengcongensis MB4
NoYes	Carboxydothermus hydrogenoformans Z-2901
NoYes	Thermoanaerobacter mathranii subsp. mathranii str. A3
NoYes	Thermoanaerobacter pseudethanolicus ATCC 33223
NoYes	Thermoanaerobacter sp. X514
NoYes	Thermoanaerobacter italicus Ab9
NoYes	Thermoanaerobacter wiegelii Rt8.B1
NoYes	Thermoanaerobacter brockii subsp. finnii Ako-1
NoYes	Acetohalobium arabaticum DSM 5501
NoYes	Halothermothrix orenii H 168
NoYes	Halanaerobium hydrogeniformans
NoYes	Halanaerobium praevalens DSM 2228
NoYes	Oenococcus oeni PSU-1
NoYes	Streptococcus parasanguinis ATCC 15912
NoYes	Exiguobacterium sp. MH3
NoYes	Exiguobacterium sp. AT1b
NoYes	Exiguobacterium sibiricum 255-15
NoYes	Brevibacillus brevis NBRC 100599
NoYes	Paenibacillus sp. JDR-2
NoYes	Paenibacillus terrae HPL-003
NoYes	Paenibacillus mucilaginosus 3016
NoYes	Paenibacillus polymyxa M1
NoYes	Bacillus selenitireducens MLS10
NoYes	Solibacillus silvestris StLB046
NoYes	Geobacillus thermoglucosidasius C56-YS93
NoYes	Lysinibacillus sphaericus C3-41
NoYes	Oceanobacillus iheyensis HTE831
NoYes	Anoxybacillus flavithermus WK1
NoYes	Geobacillus thermoleovorans CCB_US3_UF5
NoYes	Geobacillus kaustophilus HTA426
NoYes	Geobacillus sp. GHH01
NoYes	Geobacillus sp. WCH70
NoYes	Geobacillus thermodenitrificans NG80-2
NoYes	Halobacillus halophilus DSM 2266
NoYes	Bacillus sp. JS
NoYes	butyrate-producing bacterium SSC/2
NoYes	Bacillus sp. 1NLA3E
NoYes	Bacillus amyloliquefaciens FZB42
NoYes	Bacillus atrophaeus 1942
NoYes	Bacillus subtilis subsp. subtilis str. 168
NoYes	Bacillus licheniformis DSM 13 = ATCC 14580
NoYes	Bacillus weihenstephanensis KBAB4
NoYes	Bacillus thuringiensis str. Al Hakam
NoYes	Bacillus cereus 03BB102
NoYes	Bacillus anthracis str. A0248
NoYes	Bacillus pumilus SAFR-032
NoYes	Bacillus megaterium DSM 319
NoYes	Bacillus coagulans 2-6
NoYes	Macrococcus caseolyticus JCSC5402
NoYes	Staphylococcus pseudintermedius HKU10-03
NoYes	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
NoYes	Staphylococcus lugdunensis HKU09-01
NoYes	Staphylococcus haemolyticus JCSC1435
NoYes	Staphylococcus epidermidis RP62A
NoYes	Staphylococcus carnosus subsp. carnosus TM300
NoYes	Staphylococcus aureus subsp. aureus JH1
NoYes	Staphylococcus aureus
NoYes	Candidatus Cloacamonas acidaminovorans
NoYes	Melioribacter roseus P3M
NoYes	Ignavibacterium album JCM 16511
NoYes	Fibrella aestuarina
NoYes	Leadbetterella byssophila DSM 17132
NoYes	Dyadobacter fermentans DSM 18053
NoYes	Spirosoma linguale DSM 74
NoYes	Runella slithyformis DSM 19594
NoYes	Zunongwangia profunda SM-A87
NoYes	Flavobacteriaceae bacterium 3519-10
NoYes	Polaribacter sp. MED152
NoYes	Riemerella anatipestifer ATCC 11845 = DSM 15868
NoYes	Ornithobacterium rhinotracheale DSM 15997
NoYes	Weeksella virosa DSM 16922
NoYes	Flavobacterium indicum GPTSA100-9
NoYes	Flavobacterium psychrophilum JIP02/86
NoYes	Flavobacterium branchiophilum FL-15
NoYes	Flavobacterium columnare ATCC 49512
NoYes	Flavobacterium johnsoniae UW101
NoYes	Blattabacterium sp. (Nauphoeta cinerea)
NoYes	Blattabacterium sp. (Blattella germanica) str. Bge
NoYes	Waddlia chondrophila WSU 86-1044
NoYes	Parachlamydia acanthamoebae UV-7
NoYes	Simkania negevensis Z
NoYes	Aminobacterium colombiense DSM 12261
NoYes	Thermanaerovibrio acidaminovorans DSM 6589
NoYes	Anaerobaculum mobile DSM 13181
NoYes	Spirochaeta smaragdinae DSM 11293
NoYes	Sphaerochaeta coccoides DSM 17374
NoYes	Spirochaeta caldaria DSM 7334
NoYes	Treponema azotonutricium ZAS-9
NoYes	Treponema primitia ZAS-2
NoYes	Treponema paraluiscuniculi Cuniculi A
NoYes	Treponema pallidum subsp. pallidum SS14
NoYes	Geobacillus sp. JF8
NoYes	Spirochaeta africana DSM 8902
NoYes	Spirochaeta thermophila DSM 6192
NoYes	Marinitoga piezophila KA3
NoYes	Petrotoga mobilis SJ95
NoYes	Mesotoga prima MesG1.Ag.4.2
NoYes	Kosmotoga olearia TBF 19.5.1
NoYes	Thermotoga lettingae TMO
NoYes	Thermotoga thermarum DSM 5069
NoYes	Thermotoga sp. RQ2
NoYes	Thermotoga naphthophila RKU-10
NoYes	Thermotoga petrophila RKU-1
NoYes	Thermotoga neapolitana DSM 4359
NoYes	Elusimicrobium minutum Pei191
NoYes	Dictyoglomus turgidum DSM 6724
NoYes	Dictyoglomus thermophilum H-6-12
NoYes	Caldisericum exile AZM16c01
NoYes	Sebaldella termitidis ATCC 33386
NoYes	Leptotrichia buccalis C-1013-b
NoYes	Ilyobacter polytropus DSM 2926
NoYes	Fusobacterium nucleatum subsp. nucleatum ATCC 25586
NoYes	Syntrophus aciditrophicus SB
NoYes	Desulfobacterium autotrophicum HRM2
NoYes	Desulfomicrobium baculatum DSM 4028
NoYes	Dinoroseobacter shibae DFL 12
NoYes	Phaeobacter gallaeciensis 2.10
NoYes	Jannaschia sp. CCS1
NoYes	Ruegeria sp. TM1040
NoYes	Ruegeria pomeroyi DSS-3
NoYes	Ketogulonigenium vulgarum WSH-001
NoYes	Roseobacter litoralis Och 149
NoYes	Roseobacter denitrificans OCh 114
NoYes	Rhodobacter sphaeroides ATCC 17029
NoYes	Rhodobacter capsulatus SB 1003
NoYes	Paracoccus denitrificans PD1222
NoYes	Candidatus Puniceispirillum marinum IMCC1322
NoYes	Wolbachia endosymbiont of Culex quinquefasciatus Pel
NoYes	Wolbachia sp. wRi
NoYes	Brucella microti CCM 4915
NoYes	Brucella pinnipedialis B2/94
NoYes	Brucella canis ATCC 23365
NoYes	Brucella suis ATCC 23445
NoYes	Brucella melitensis ATCC 23457
NoYes	Brucella ovis ATCC 25840
NoYes	Brucella abortus S19
NoYes	Mesorhizobium sp. BNC1
NoYes	Mesorhizobium opportunistum WSM2075
NoYes	Mesorhizobium loti MAFF303099
NoYes	Pelagibacterium halotolerans B2
NoYes	Bartonella tribocorum CIP 105476
NoYes	Bartonella clarridgeiae 73
NoYes	Bartonella grahamii as4aup
NoYes	Bartonella quintana str. Toulouse
NoYes	Bartonella bacilliformis KC583
NoYes	Legionella longbeachae NSW150
NoYes	Legionella pneumophila str. Corby
NoYes	Francisella noatunensis subsp. orientalis str. Toba 04
NoYes	Francisella sp. TX077308
NoYes	Francisella philomiragia subsp. philomiragia ATCC 25017
NoYes	Francisella tularensis subsp. tularensis WY96-3418
NoYes	Francisella cf. novicida 3523
NoYes	Francisella novicida U112
NoYes	Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frog
NoYes	Drosophila melanogaster FlyBase 5.12 - Fruit fly
NoYes	Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquito
NoYes	Ascaris suum Victoria/Ghent - Pig roundworm
NoYes	Caenorhabditis elegans WormBase WS218 - Roundworm
NoYes	Cryptococcus neoformans var. grubii H99
NoYes	Cryptococcus neoformans B-3501A
NoYes	Cryptococcus neoformans JEC21
NoYes	Coccidioides posadasii str. Silveira
NoYes	Coccidioides immitis RMSCC 3703
NoYes	Coccidioides immitis RMSCC 2394
NoYes	Ajellomyces dermatitidis ER-3
NoYes	Histoplasma capsulatum H143
NoYes	Histoplasma capsulatum H88
NoYes	Histoplasma capsulatum G186AR
NoYes	Aspergillus fumigatus A1163
NoYes	Candida albicans WO-1
NoYes	Saccharomyces cerevisiae UC5
NoYes	Saccharomyces cerevisiae PW5
NoYes	Saccharomyces cerevisiae YJM269
NoYes	Saccharomyces cerevisiae T7
NoYes	Saccharomyces cerevisiae VL3
NoYes	Saccharomyces cerevisiae Vin13
NoYes	Saccharomyces cerevisiae LalvinQA23
NoYes	Saccharomyces cerevisiae Sigma1278b
NoYes	Saccharomyces cerevisiae W303
NoYes	Saccharomyces cerevisiae JAY291
NoYes	Saccharomyces cerevisiae M22
NoYes	Saccharomyces cerevisiae CLIB215
NoYes	Saccharomyces cerevisiae YJM789
NoYes	Saccharomyces cerevisiae YJM789
NoYes	Saccharomyces cerevisiae RM11-1a
NoYes	Saccharomyces cerevisiae RM11-1a
NoYes	Saccharomyces cerevisiae SGD - Baker's yeast
NoYes	Schizosaccharomyces pombe 972h-
NoYes	Batrachochytrium dendrobatidis JEL423
NoYes	Batrachochytrium dendrobatidis JAM81
NoYes	Theobroma cacao Matina 1-6 v0.9 - Cacao
NoYes	Hordeum vulgare 22 - Domesticated barley
NoYes	Oryza sativa ssp. Indica - Long-grained rice
NoYes	Trypanosoma brucei Lister 427 v4.1
NoYes	Plasmodium falciparum HB3
NoYes	Plasmodium falciparum Dd2
NoYes	Spiroplasma taiwanense CT-1
NoYes	Mycoplasma leachii PG50
NoYes	Mycoplasma mycoides subsp. mycoides SC str. Gladysdale
NoYes	Mycoplasma putrefaciens Mput9231
NoYes	Adlercreutzia equolifaciens DSM 19450
NoYes	Tropheryma whipplei str. Twist
NoYes	Gardnerella vaginalis HMP9231
NoYes	Gardnerella vaginalis ATCC 14019
NoYes	Bifidobacterium thermophilum RBL67
NoYes	Bifidobacterium animalis subsp. animalis ATCC 25527
NoYes	Bifidobacterium animalis subsp. lactis Bl12
NoYes	Bifidobacterium animalis subsp. lactis B420
NoYes	Bifidobacterium animalis subsp. lactis ATCC 27673
NoYes	Bifidobacterium animalis subsp. lactis BLC1
NoYes	Bifidobacterium animalis subsp. lactis CNCM I-2494
NoYes	Bifidobacterium animalis subsp. lactis Bi-07
NoYes	Bifidobacterium animalis subsp. lactis V9
NoYes	Bifidobacterium animalis subsp. lactis DSM 10140
NoYes	Bifidobacterium animalis subsp. lactis BB-12
NoYes	Bifidobacterium animalis subsp. lactis AD011
NoYes	Bifidobacterium bifidum PRL2010
NoYes	Bifidobacterium bifidum BGN4
NoYes	Clostridium thermocellum DSM 1313
NoYes	[Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532
NoYes	Faecalibacterium prausnitzii L2-6
NoYes	Ruminococcus champanellensis 18P13
NoYes	Clostridium acidurici 9a
NoYes	Desulfosporosinus meridiei DSM 13257
NoYes	Desulfitobacterium dichloroeliminans LMG P-21439
NoYes	Desulfitobacterium hafniense DCB-2
NoYes	Desulfotomaculum gibsoniae DSM 7213
NoYes	Clostridium difficile BI1
NoYes	Clostridium difficile R20291
NoYes	Clostridium difficile CD196
NoYes	Clostridium saccharolyticum Clostridium cf. saccharolyticum K10
NoYes	Coprococcus catus GD/7
NoYes	Roseburia intestinalis XB6B4
NoYes	Candidatus Arthromitus sp. SFB-rat-Yit
NoYes	Candidatus Arthromitus sp. SFB-mouse-Yit
NoYes	Clostridium sp. SY8519
NoYes	Clostridium autoethanogenum DSM 10061
NoYes	Clostridium saccharoperbutylacetonicum N1-4(HMT)
NoYes	Clostridium tetani genome 12124569
NoYes	Clostridium perfringens SM101
NoYes	Clostridium perfringens str. 13
NoYes	Clostridium botulinum H04402 065
NoYes	Clostridium botulinum BKT015925
NoYes	Clostridium botulinum F str. 230613
NoYes	Clostridium botulinum F str. Langeland
NoYes	Clostridium botulinum B1 str. Okra
NoYes	Clostridium botulinum Ba4 str. 657
NoYes	Clostridium botulinum A2 str. Kyoto
NoYes	Clostridium botulinum A3 str. Loch Maree
NoYes	Clostridium botulinum A str. Hall
NoYes	Clostridium botulinum A str. ATCC 19397
NoYes	Clostridium acetobutylicum DSM 1731
NoYes	Clostridium acetobutylicum EA 2018
NoYes	Thermoanaerobacterium saccharolyticum JW/SL-YS485
NoYes	Thermoanaerobacterium thermosaccharolyticum M0795
NoYes	Thermacetogenium phaeum DSM 12270
NoYes	Thermoanaerobacter sp. X513
NoYes	Halobacteroides halobius DSM 5150
NoYes	Streptococcus parasanguinis FW213
NoYes	Exiguobacterium antarcticum B7
NoYes	Thermobacillus composti KWC4
NoYes	Paenibacillus sp. Y412MC10
NoYes	Paenibacillus mucilaginosus KNP414
NoYes	Paenibacillus mucilaginosus K02
NoYes	Paenibacillus larvae subsp. larvae DSM 25430
NoYes	Paenibacillus polymyxa CR1
NoYes	Paenibacillus polymyxa SC2
NoYes	Paenibacillus polymyxa E681
NoYes	Listeria monocytogenes SLCC2376
NoYes	Geobacillus sp. C56-T3
NoYes	Geobacillus sp. Y4.1MC1
NoYes	Geobacillus sp. Y412MC52
NoYes	Geobacillus sp. Y412MC61
NoYes	Amphibacillus xylanus NBRC 15112
NoYes	Bacillus amyloliquefaciens subsp. plantarum sequencing
NoYes	Bacillus amyloliquefaciens subsp. plantarum UCMB5033
NoYes	Bacillus amyloliquefaciens subsp. plantarum AS43.3
NoYes	Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2
NoYes	Bacillus amyloliquefaciens subsp. plantarum UCMB5113
NoYes	Bacillus amyloliquefaciens subsp. plantarum UCMB5036
NoYes	Bacillus amyloliquefaciens subsp. plantarum CAU B946
NoYes	Bacillus amyloliquefaciens LFB112
NoYes	Bacillus amyloliquefaciens CC178
NoYes	Bacillus amyloliquefaciens Y2
NoYes	Bacillus amyloliquefaciens IT-45
NoYes	Bacillus amyloliquefaciens XH7
NoYes	Bacillus amyloliquefaciens LL3
NoYes	Bacillus amyloliquefaciens TA208
NoYes	Bacillus amyloliquefaciens DSM 7
NoYes	Bacillus licheniformis 9945A
NoYes	Bacillus subtilis PY79
NoYes	Bacillus subtilis XF-1
NoYes	Bacillus subtilis QB928
NoYes	Bacillus subtilis BSn5
NoYes	Bacillus subtilis subsp. subtilis str. BAB-1
NoYes	Bacillus subtilis subsp. subtilis str. BSP1
NoYes	Bacillus subtilis subsp. subtilis str. RO-NN-1
NoYes	Bacillus subtilis subsp. subtilis 6051-HGW
NoYes	Bacillus subtilis subsp. spizizenii TU-B-10
NoYes	Bacillus subtilis subsp. spizizenii str. W23
NoYes	Bacillus subtilis subsp. natto BEST195
NoYes	Bacillus licheniformis DSM 13 = ATCC 14580
NoYes	Bacillus infantis NRRL B-14911
NoYes	Bacillus cereus subsp. cytotoxis NVH 391-98
NoYes	Bacillus toyonensis BCT-7112
NoYes	Bacillus thuringiensis HD-771
NoYes	Bacillus thuringiensis HD-789
NoYes	Bacillus thuringiensis MC28
NoYes	Bacillus thuringiensis serovar chinensis CT-43
NoYes	Bacillus thuringiensis YBT-1518
NoYes	Bacillus thuringiensis Bt407
NoYes	Bacillus thuringiensis serovar konkukian str. 97-27
NoYes	Bacillus thuringiensis serovar kurstaki str. HD73
NoYes	Bacillus thuringiensis BMB171
NoYes	Bacillus thuringiensis serovar finitimus YBT-020
NoYes	Bacillus thuringiensis serovar thuringiensis str. IS5056
NoYes	Bacillus cereus FRI-35
NoYes	Bacillus cereus biovar anthracis str. CI
NoYes	Bacillus cereus AH820
NoYes	Bacillus cereus AH187
NoYes	Bacillus cereus B4264
NoYes	Bacillus cereus G9842
NoYes	Bacillus cereus Q1
NoYes	Bacillus cereus F837/76
NoYes	Bacillus cereus NC7401
NoYes	Bacillus cereus E33L
NoYes	Bacillus cereus ATCC 14579
NoYes	Bacillus cereus ATCC 10987
NoYes	Bacillus anthracis str. H9401
NoYes	Bacillus anthracis str. CDC 684
NoYes	Bacillus anthracis str. 'Ames Ancestor'
NoYes	Bacillus anthracis str. Sterne
NoYes	Bacillus anthracis str. Ames
NoYes	Bacillus megaterium WSH-002
NoYes	Bacillus megaterium QM B1551
NoYes	Bacillus coagulans 36D1
NoYes	Staphylococcus aureus subsp. aureus MSHR1132
NoYes	Staphylococcus pseudintermedius ED99
NoYes	Staphylococcus pasteuri SP1
NoYes	Staphylococcus lugdunensis N920143
NoYes	Staphylococcus warneri SG1
NoYes	Staphylococcus epidermidis ATCC 12228
NoYes	Staphylococcus aureus CA-347
NoYes	Staphylococcus aureus Bmb9393
NoYes	Staphylococcus aureus M1
NoYes	Staphylococcus aureus 08BA02176
NoYes	Staphylococcus aureus ST228/18412
NoYes	Staphylococcus aureus ST228/18341
NoYes	Staphylococcus aureus ST228/16125
NoYes	Staphylococcus aureus ST228/16035
NoYes	Staphylococcus aureus ST228/15532
NoYes	Staphylococcus aureus ST228/10497
NoYes	Staphylococcus aureus ST228/10388
NoYes	Staphylococcus aureus 04-02981
NoYes	Staphylococcus aureus RF122
NoYes	Staphylococcus aureus subsp. aureus Z172
NoYes	Staphylococcus aureus subsp. aureus 6850
NoYes	Staphylococcus aureus subsp. aureus SA957
NoYes	Staphylococcus aureus subsp. aureus CN1
NoYes	Staphylococcus aureus subsp. aureus SA40
NoYes	Staphylococcus aureus subsp. aureus 11819-97
NoYes	Staphylococcus aureus subsp. aureus M013
NoYes	Staphylococcus aureus subsp. aureus HO 5096 0412
NoYes	Staphylococcus aureus subsp. aureus VC40
NoYes	Staphylococcus aureus subsp. aureus T0131
NoYes	Staphylococcus aureus subsp. aureus LGA251
NoYes	Staphylococcus aureus subsp. aureus ECT-R 2
NoYes	Staphylococcus aureus subsp. aureus JKD6159
NoYes	Staphylococcus aureus subsp. aureus ED133
NoYes	Staphylococcus aureus subsp. aureus ED98
NoYes	Staphylococcus aureus subsp. aureus TW20
NoYes	Staphylococcus aureus subsp. aureus 55/2053
NoYes	Staphylococcus aureus subsp. aureus TCH60
NoYes	Staphylococcus aureus subsp. aureus str. JKD6008
NoYes	Staphylococcus aureus subsp. aureus 71193
NoYes	Staphylococcus aureus subsp. aureus S0385
NoYes	Staphylococcus aureus subsp. aureus str. Newman
NoYes	Staphylococcus aureus subsp. aureus Mu3
NoYes	Staphylococcus aureus subsp. aureus USA300_TCH1516
NoYes	Staphylococcus aureus subsp. aureus USA300_FPR3757
NoYes	Staphylococcus aureus subsp. aureus JH9
NoYes	Staphylococcus aureus subsp. aureus MSSA476
NoYes	Staphylococcus aureus subsp. aureus MRSA252
NoYes	Staphylococcus aureus subsp. aureus MW2
NoYes	Staphylococcus aureus subsp. aureus N315
NoYes	Staphylococcus aureus subsp. aureus Mu50
NoYes	Staphylococcus aureus subsp. aureus COL
NoYes	Staphylococcus aureus subsp. aureus NCTC 8325
NoYes	Emticicia oligotrophica DSM 17448
NoYes	Riemerella anatipestifer RA-CH-2
NoYes	Riemerella anatipestifer RA-CH-1
NoYes	Riemerella anatipestifer RA-GD
NoYes	Riemerella anatipestifer ATCC 11845 = DSM 15868
NoYes	Blattabacterium sp. (Panesthia angustipennis spadica) Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA
NoYes	Blattabacterium sp. (Blaberus giganteus)
NoYes	Blattabacterium sp. (Blatta orientalis) Blattabacterium sp. (Blatta orientalis) str. Tarazona
NoYes	Blattabacterium sp. (Periplaneta americana) str. BPLAN
NoYes	Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR
NoYes	Treponema pallidum str. Fribourg-Blanc
NoYes	Treponema pallidum subsp. pertenue str. Gauthier
NoYes	Treponema pallidum subsp. pertenue str. CDC2
NoYes	Treponema pallidum subsp. pertenue str. SamoaD
NoYes	Treponema pallidum subsp. pallidum str. Mexico A
NoYes	Treponema pallidum subsp. pallidum str. Chicago
NoYes	Treponema pallidum subsp. pallidum DAL-1
NoYes	Treponema pallidum subsp. pallidum str. Nichols
NoYes	Spirochaeta thermophila DSM 6578
NoYes	Fusobacterium nucleatum subsp. vincentii 3_1_36A2
NoYes	Fusobacterium nucleatum subsp. animalis 4_8
NoYes	Desulfobacula toluolica Tol2
NoYes	Phaeobacter gallaeciensis DSM 17395
NoYes	Phaeobacter gallaeciensis DSM 26640
NoYes	Leisingera methylohalidivorans DSM 14336
NoYes	Octadecabacter antarcticus 307
NoYes	Octadecabacter arcticus 238
NoYes	Rhodobacter sphaeroides ATCC 17025
NoYes	Rhodobacter sphaeroides 2.4.1
NoYes	Paracoccus aminophilus JCM 7686
NoYes	Wolbachia endosymbiont of Drosophila melanogaster
NoYes	Wolbachia endosymbiont of Drosophila simulans wHa
NoYes	Wolbachia endosymbiont of Drosophila simulans wNo
NoYes	Brucella ceti TE10759-12
NoYes	Brucella ceti TE28753-12
NoYes	Brucella canis HSK A52141
NoYes	Brucella suis VBI22
NoYes	Brucella suis 1330
NoYes	Brucella suis 1330
NoYes	Brucella melitensis NI
NoYes	Brucella melitensis M5-90
NoYes	Brucella melitensis M28
NoYes	Brucella melitensis bv. 1 str. 16M
NoYes	Brucella abortus A13334
NoYes	Brucella melitensis biovar Abortus 2308
NoYes	Brucella abortus bv. 1 str. 9-941
NoYes	Candidatus Liberibacter solanacearum CLso-ZC1
NoYes	Bartonella australis Aust/NH1
NoYes	Bartonella vinsonii subsp. berkhoffii str. Winnie
NoYes	Bartonella quintana RM-11
NoYes	Bibersteinia trehalosi USDA-ARS-USMARC-192
NoYes	Legionella pneumophila str. Paris
NoYes	Legionella pneumophila str. Lens
NoYes	Legionella pneumophila subsp. pneumophila LPE509
NoYes	Legionella pneumophila subsp. pneumophila str. Thunder Bay
NoYes	Legionella pneumophila subsp. pneumophila str. Philadelphia 1
NoYes	Legionella pneumophila subsp. pneumophila
NoYes	Legionella pneumophila subsp. pneumophila
NoYes	Legionella pneumophila subsp. pneumophila ATCC 43290
NoYes	Legionella pneumophila 2300/99 Alcoy
NoYes	Francisella noatunensis subsp. orientalis LADL--07-285A
NoYes	Francisella tularensis subsp. mediasiatica FSC147
NoYes	Francisella tularensis subsp. holarctica F92
NoYes	Francisella tularensis subsp. holarctica FTNF002-00
NoYes	Francisella tularensis subsp. holarctica OSU18
NoYes	Francisella tularensis subsp. holarctica LVS
NoYes	Francisella tularensis subsp. holarctica FSC200
NoYes	Francisella tularensis subsp. tularensis TIGB03
NoYes	Francisella tularensis subsp. tularensis TI0902
NoYes	Francisella tularensis subsp. tularensis NE061598
NoYes	Francisella tularensis subsp. tularensis FSC198
NoYes	Francisella tularensis subsp. tularensis SCHU S4
NoYes	Francisella cf. novicida Fx1
NoYes	Homo sapiens 69_37 - Human
NoYes	Pan troglodytes 69_2.1.4 - Chimpanzee
NoYes	Gorilla gorilla 69_3.1 - Western gorilla
NoYes	Pongo abelii 69_2 - Sumatran orangutan
NoYes	Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbon
NoYes	Macaca mulatta 69_1 - Rhesus monkey
NoYes	Callithrix jacchus 69_3.2.1 - White-tufted-ear marmoset
NoYes	Otolemur garnettii 69_3 - Small-eared galago
NoYes	Tarsius syrichta 69_1
NoYes	Microcebus murinus 69_1 - Gray mouse lemur
NoYes	Rattus norvegicus 69_3.4 - Norway rat
NoYes	Mus musculus 69_38 - House mouse
NoYes	Dipodomys ordii 69_1 - Ord's kangaroo rat
NoYes	Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrel
NoYes	Cavia porcellus 69_3 - Domestic guinea pig
NoYes	Oryctolagus cuniculus 69_2 - Rabbit
NoYes	Ochotona princeps 69 - American pika
NoYes	Tupaia belangeri 69 - Northern tree shrew
NoYes	Sus scrofa 69_10.2 - Pig
NoYes	Bos taurus 69_3.1 - Cattle
NoYes	Vicugna pacos 69_1 - Alpaca
NoYes	Tursiops truncatus 69_1 - Bottlenose dolphin
NoYes	Mustela putorius furo 69_1.0 - Domestic ferret
NoYes	Ailuropoda melanoleuca 69_1 - Giant panda
NoYes	Canis familiaris 69_3.1 - Dog
NoYes	Felis catus 69 - Domestic cat
NoYes	Equus caballus 69_2 - Horse
NoYes	Myotis lucifugus 69_2.0 - Little brown bat
NoYes	Pteropus vampyrus 69_1 - Large flying fox
NoYes	Sorex araneus 69_1 - European shrew
NoYes	Erinaceus europaeus 69 - Western European hedgehog
NoYes	Loxodonta africana 69_3 - African savanna elephant
NoYes	Echinops telfairi 69 - Small Madagascar hedgehog
NoYes	Dasypus novemcinctus 69_2 - Nine-banded armadillo
NoYes	Choloepus hoffmanni 69_1 - Hoffmann's two-fingered sloth
NoYes	Macropus eugenii 69_1.0 - Tammar wallaby
NoYes	Sarcophilus harrisii 69_7.0 - Tasmanian devil
NoYes	Monodelphis domestica 69_5 - Gray short-tailed opossum
NoYes	Ornithorhynchus anatinus 69_5 - Platypus
NoYes	Petromyzon marinus 69_7.0 - Sea lamprey
NoYes	Meleagris gallopavo 69_2 - Turkey
NoYes	Gallus gallus 69_2 - Chicken
NoYes	Taeniopygia guttata 69_3.2.4 - Zebra finch
NoYes	Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtle
NoYes	Anolis carolinensis 69_2.0 - Green anole
NoYes	Xenopus tropicalis 69_4.2 - Tropical clawed frog
NoYes	Latimeria chalumnae 69_1 - Coelacanth
NoYes	Gadus morhua 69_1 - Atlantic cod
NoYes	Tetraodon nigroviridis 69_8 - Spotted green pufferfish
NoYes	Takifugu rubripes 69_4 - Torafugu
NoYes	Gasterosteus aculeatus 69_1 - Three-spined stickleback
NoYes	Xiphophorus maculatus 69_4.4.2 - Southern platyfish
NoYes	Oreochromis niloticus 69_1.0 - Nile tilapia
NoYes	Danio rerio 69_9 - Zebrafish
NoYes	Drosophila melanogaster 69_5 - Fruit fly
NoYes	Caenorhabditis elegans 69_215 - Roundworm
NoYes	Saccharomyces cerevisiae 69_4 - Baker's yeast
NoYes	Arabidopsis thaliana 10 - Thale cress
NoYes	Homo sapiens 75_37 - Human
NoYes	Homo sapiens - Human
NoYes	Mus musculus 63_37 (longest transcript per gene) - House mouse
NoYes	Heliconius numata
NoYes	Loa loa v3.3 - Eye worm
NoYes	Wuchereria bancrofti v1.0 - Agent of lymphatic filariasis
NoYes	Brugia malayi v1.0 - Agent of lymphatic filariasis
NoYes	Lotus japonicus
NoYes	Malus x domestica - Apple
NoYes	Ricinus communis - Castor bean
NoYes	Nicotiana benthamiana 0.4.4
NoYes	Solanum pimpinellifolium A-1.0 - Currant tomato
NoYes	Solanum lycopersicum v2.3 - Tomato
NoYes	Phoenix dactylifera - Date palm
NoYes	Acholeplasma laidlawii PG-8A
NoYes	1_Upper_euphotic (meta-genome)
NoYes	2_050719S (meta-genome)
NoYes	4_050719Q (meta-genome)
NoYes	5_050719P (meta-genome)
NoYes	Bath Hot Springs, planktonic community (meta-genome)
NoYes	Combined (meta-genome)
NoYes	Dump bottom (Dump bottom) (meta-genome)
NoYes	Dump top (Dump top) (meta-genome)
NoYes	Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)
NoYes	Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)
NoYes	Freshwater propionate enrichment of Brocadia fulgida (meta-genome)
NoYes	Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes
NoYes	Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)
NoYes	Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)
NoYes	Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)
NoYes	Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)
NoYes	Human Gut Community Subject 7 (meta-genome)
NoYes	Human Gut Community Subject 8 (meta-genome)
NoYes	Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)
NoYes	Mouse Gut Community ob1 (meta-genome)
NoYes	NCBI 2017_08 genome
NoYes	Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)
NoYes	Protozoadb 2010_08 (Protozoadb)
NoYes	simHC - Simulated High Complexity Metagenome (meta-genome)
NoYes	simMC - Simulated Medium Complexity Metagenome (meta-genome)
NoYes	Single-cell genome from subgingival tooth surface TM7a (meta-genome)
NoYes	Sludge/Australian, Phrap Assembly (meta-genome)
NoYes	Soil microbial communities from Minnesota Farm (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)
NoYes	Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)
NoYes	STRING v9.0.5 (STRING)
NoYes	Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)
NoYes	Termite Protist Endosymbiont Community (meta-genome)
NoYes	Uniprot 2018_03 genome
NoYes	Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)
NoYes	Global Ocean Sampling Expedition (GOS)
NoYes	NCBI viral sequences (Viral)
NoYes	PDB chains (SCOP 1.75) (PDB)
NoYes	Protein Data Bank (all PDB sequenc)
NoYes	SCOP2 SCOPe CATH ECOD (all domain sequ)
NoYes	TargetDB (Targets)
NoYes	ALL (only advised for small superfamilies)

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Thiamin pyrophosphokinase, substrate-binding domain alignments