Select to display Genome No Canis familiaris 58 (pseudogenes) - DogNo Danio rerio 58 (pseudogenes) - ZebrafishNo Gallus gallus 58 (pseudogene) - ChickenNo Homo sapiens 58 (pseudogenes) - HumanNo Mus musculus 56 (pseudogenes) - House mouseNo Pan troglodytes 58 (pseudogenes) - ChimpanzeeNo Homo sapiens 76_38 - HumanNo Pan troglodytes 76_2.1.4 - ChimpanzeeNo Gorilla gorilla 76_3.1 - Western gorillaNo Pongo abelii 76_2 - Sumatran orangutanNo Tarsius syrichta 76_1 No Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbonNo Papio anubis 76 - Olive baboonNo Macaca mulatta 76_1 - Rhesus monkeyNo Callithrix jacchus 76_3.2.1 - White-tufted-ear marmosetNo Otolemur garnettii 76_3 - Small-eared galagoNo Microcebus murinus 76_1 - Gray mouse lemurNo Physcomitrella patens subsp. patens 22 No Rattus norvegicus 76_5.0 - Norway ratNo Mus musculus 76_38 - House mouseNo Dipodomys ordii 76_1 - Ord's kangaroo ratNo Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrelNo Heterocephalus glaber v1.7-2 - Naked mole-ratNo Cavia porcellus 76_3 - Domestic guinea pigNo Oryctolagus cuniculus 76_2 - RabbitNo Ochotona princeps 76 - American pikaNo Tupaia belangeri 76 - Northern tree shrewNo Sus scrofa 76_10.2 - PigNo Bos taurus 76_3.1 - CattleNo Ovis aries 76_3.1 - SheepNo Vicugna pacos 76_1 - AlpacaNo Tursiops truncatus 76_1 - Bottlenose dolphinNo Mustela putorius furo 76_1.0 - Domestic ferretNo Ailuropoda melanoleuca 76_1 - Giant pandaNo Canis familiaris 76_3.1 - DogNo Felis catus 76_6.2 - Domestic catNo Equus caballus 76_2 - HorseNo Myotis lucifugus 76_2.0 - Little brown batNo Pteropus vampyrus 76_1 - Large flying foxNo Sorex araneus 76_1 - European shrewNo Erinaceus europaeus 76 - Western European hedgehogNo Procavia capensis 76_1 - Cape rock hyraxNo Loxodonta africana 76_3 - African savanna elephantNo Echinops telfairi 76 - Small Madagascar hedgehogNo Dasypus novemcinctus 76_2 - Nine-banded armadilloNo Choloepus hoffmanni 76_1 - Hoffmann's two-fingered slothNo Macropus eugenii 76_1.0 - Tammar wallabyNo Sarcophilus harrisii 76_7.0 - Tasmanian devilNo Monodelphis domestica 76_5 - Gray short-tailed opossumNo Ornithorhynchus anatinus 76_5 - PlatypusNo Saccoglossus kowalevskii v3.0 No Petromyzon marinus 76_7.0 - Sea lampreyNo Meleagris gallopavo 76_2 - TurkeyNo Gallus gallus 76_4 - ChickenNo Anas platyrhynchos 76_1.0 - MallardNo Taeniopygia guttata 76_3.2.4 - Zebra finchNo Ficedula albicollis 76_1.0 - Collared flycatcherNo Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtleNo Anolis carolinensis 76_2.0 - Green anoleNo Xenopus laevis No Xenopus tropicalis 76_4.2 - Tropical clawed frogNo Latimeria chalumnae 76_1 - CoelacanthNo Lepisosteus oculatus 76 - Spotted garNo Gadus morhua 76_1 - Atlantic codNo Tetraodon nigroviridis 76_8 - Spotted green pufferfishNo Takifugu rubripes 76_4 - TorafuguNo Gasterosteus aculeatus 76_1 - Three-spined sticklebackNo Oryzias latipes 76_1 - Japanese medakaNo Xiphophorus maculatus 76_4.4.2 - Southern platyfishNo Poecilia formosa 76 - Amazon mollyNo Oreochromis niloticus 76_1.0 - Nile tilapiaNo Astyanax mexicanus 76 - Mexican tetraNo Danio rerio 76_9 - ZebrafishNo Oikopleura dioica No Ciona savignyi 76_2.0 - Pacific transparent sea squirtNo Ciona intestinalis 76 - Vase tunicateNo Strongylocentrotus purpuratus v3.1 - Purple sea urchinNo Adineta vaga No Octopus bimaculoides 280 No Crassostrea gigas 22 - Pacific oysterNo Lottia gigantea No Helobdella robusta No Capitella sp. I No Danaus plexippus OGS1.0 - Monarch butterflyNo Heliconius melpomene No Bombyx mori No Nasonia vitripennis No Apis mellifera 38.2d - Honey beeNo Harpegnathos saltator v3.3 - Jerdon's jumping antNo Linepithema humile v1.1 - Argentine antNo Pogonomyrmex barbatus v1.2 - Red harvester antNo Solenopsis invicta v.2.2.3 - Red fire antNo Acromyrmex echinatior v3.8 - Panamanian leafcutter antNo Atta cephalotes v1.1 No Camponotus floridanus v3.3 - Florida carpenter antNo Lucilia cuprina - Australian sheep blowflyNo Drosophila grimshawi 1.3 No Drosophila willistoni 1.3 No Drosophila pseudoobscura 2.13 No Drosophila persimilis 1.3 No Drosophila suzukii No Drosophila yakuba 1.3 No Drosophila simulans 1.3 No Drosophila sechellia 1.3 No Drosophila melanogaster 76_5 - Fruit flyNo Drosophila erecta 1.3 No Drosophila ananassae 1.3 No Drosophila virilis 1.2 No Drosophila mojavensis 1.3 No Megaselia scalaris 22 No Aedes aegypti 55 - Yellow fever mosquitoNo Culex pipiens quinquefasciatus No Anopheles darlingi 22 - American malaria mosquitoNo Anopheles gambiae 49_3j - African malaria mosquitoNo Tribolium castaneum 3.0 - Red flour beetleNo Pediculus humanus corporis No Acyrthosiphon pisum No Rhodnius prolixus 22 No Daphnia pulex No Strigamia maritima 22 No Sarcoptes scabiei No Tetranychus urticae No Ixodes scapularis No Pristionchus pacificus No Meloidogyne incognita No Meloidogyne hapla No Onchocerca volvulus 22 No Brugia malayi WS250 - Agent of lymphatic filariasisNo Caenorhabditis japonica No Caenorhabditis brenneri No Caenorhabditis remanei No Caenorhabditis elegans 76_235 - RoundwormNo Caenorhabditis briggsae 2 No Trichinella spiralis 22 No Hymenolepis microstoma No Echinococcus multilocularis No Echinococcus granulosus No Taenia solium No Schistosoma mansoni No Mnemiopsis leidyi - Sea walnutNo Thelohanellus kitauei No Acropora digitifera v1.0No Nematostella vectensis 1.0 - Starlet sea anemoneNo Hydra vulgaris No Amphimedon queenslandica No Trichoplax adhaerens No Sphaeroforma arctica JP610 No Capsaspora owczarzaki ATCC 30864 No Mortierella verticillata NRRL 6337 No Piloderma croceum F 1598 v1.0No Laccaria bicolor S238N-H82 No Daldinia eschscholzii EC12 v1.0No Apiospora montagnei NRRL 25634 v1.0No Magnaporthe poae ATCC 64411 22 No Magnaporthe grisea 70-15 No Podospora anserina No Sporotrichum thermophile ATCC 42464 No Thielavia terrestris NRRL 8126 No Chaetomium globosum CBS 148.51 No Neurospora tetrasperma No Neurospora discreta FGSC 8579 No Neurospora crassa OR74A No Cryphonectria parasitica No Verticillium albo-atrum VaMs.102 No Verticillium dahliae VdLs.17 No Acremonium alcalophilum v 1.0 No Glomerella graminicola 22 No Fusarium graminearum No Nectria haematococca mpVI No Fusarium oxysporum f. sp. lycopersici 4286 No Fusarium verticillioides 7600 No Trichoderma asperellum CBS 433.97 v1.0No Trichoderma atroviride No Trichoderma citrinoviride v1.0No Trichoderma reesei 1.2 No Trichoderma virens Gv29-8 No Trichoderma longibrachiatum ATCC 18648 v1.0No Trichoderma harzianum CBS 226.95 v1.0No Botrytis cinerea B05.10 No Sclerotinia sclerotiorum No Blumeria graminis 22 No Didymella exigua CBS 183.55 v1.0No Leptosphaeria maculans 22 No Setosphaeria turcica v1.0 No Cochliobolus miyabeanus ATCC 44560 v1.0No Cochliobolus victoriae FI3 v1.0No Cochliobolus carbonum 26-R-13 v1.0No Cochliobolus heterostrophus No Alternaria brassicicola No Cochliobolus lunatus m118 v2.0No Pyrenophora teres f. teres 22 No Pyrenophora tritici-repentis No Stagonospora nodorum No Mycosphaerella graminicola IPO323 No Microsporum gypseum No Zasmidium cellare ATCC 36951 v1.0No Septoria musiva v1.0 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0No Coccidioides posadasii RMSCC 3488 No Coccidioides immitis RS No Ajellomyces dermatitidis SLH14081 No Microsporum canis CBS 113480 No Trichophyton equinum CBS 127.97 No Trichophyton verrucosum HKI 0517 No Arthroderma benhamiae CBS 112371 No Trichophyton tonsurans CBS 112818 No Trichophyton rubrum CBS 118892 No Uncinocarpus reesii 1704 No Aspergillus acidus v1.0No Aspergillus brasiliensis v1.0No Aspergillus versicolor v1.0No Aspergillus carbonarius ITEM 5010 No Aspergillus terreus NIH2624 No Aspergillus tubingensis v1.0No Aspergillus oryzae RIB40 No Aspergillus niger 22 No Aspergillus niger ATCC 1015 No Aspergillus flavus NRRL3357 No Penicillium marneffei ATCC 18224 No Tuber melanosporum Mel28 22 No Tuber melanosporum Vittad No Catenaria anguillulae PL171 v1.0No Allomyces macrogynus ATCC 38327 No Spizellomyces punctatus DAOM BR117 No Selaginella moellendorffii No Pinus taeda - Loblolly pineNo Picea abies - Norway spruceNo Eucalyptus grandis v201 - Rose gumNo Theobroma cacao B97-61/B2 v1 - CacaoNo Gossypium raimondii v221 No Citrus clementina v165 No Citrus sinensis v154 - Sweet orangeNo Thellungiella halophila v173 No Brassica rapa Chiifu-401 1.2 - Field mustardNo Capsella rubella v183 No Arabidopsis lyrata No Arabidopsis thaliana 10 - Thale cressNo Carica papaya No Medicago truncatula No Phaseolus vulgaris v186 - String beanNo Glycine max v109 - SoybeanNo Cucumis sativus v122 - CucumberNo Fragaria vesca No Malus domestica v196 - AppleNo Prunus persica v139 - PeachNo Linum usitatissimum v200 - FlaxNo Manihot esculenta v147 - CassavaNo Populus trichocarpa v156 - Black cottonwoodNo Vitis vinifera No Mimulus guttatus v140 - Spotted monkey flowerNo Solanum lycopersicum v.2.3 - TomatoNo Solanum tuberosum No Actinidia chinensis Hongyang No Aquilegia coerulea v195 No Triticum urartu 22 No Triticum aestivum 22 - Bread wheatNo Aegilops tauschii 22 No Brachypodium distachyon No Oryza barthii 22 - African wild riceNo Oryza meridionalis 22 No Oryza glumaepatula 22 No Oryza glaberrima - African riceNo Oryza punctata 22 No Oryza nivara 22 No Oryza brachyantha 22 - Malo sinaNo Oryza sativa ssp. japonica 5.0 - Japanese riceNo Oryza sativa v193 - RiceNo Phyllostachys heterocycla var. pubescens - MosochikuNo Panicum virgatum v202 - SwitchgrassNo Setaria italica v164 - Foxtail milletNo Zea mays subsp. mays No Zea mays v181 - MaizeNo Sorghum bicolor No Musa balbisiana - Balbis bananaNo Musa acuminata 22 - Wild Malaysian bananaNo Amborella trichopoda 22 No Physcomitrella patens No Coccomyxa subellipsoidea sp. C-169 v2 No Asterochloris sp. Cgr/DA1pho v1.0 No Chlorella variabilis sp. NC64A No Chlorella vulgaris No Volvox carteri f. nagariensis No Volvox carteri v199 No Chlamydomonas reinhardtii 4.0 No Micromonas sp. RCC299 No Micromonas pusilla CCMP1545 v3.0 No Cyanidioschyzon merolae strain 10D 22 No Cyanidioschyzon merolae No Porphyridium purpureum 02_2012 No Thecamonas trahens ATCC 50062 No Bigelowiella natans CCMP2755 22 No Leishmania mexicana 2.4 No Leishmania major strain Friedlin No Leishmania infantum JPCM5 2.4 No Leishmania braziliensis MHOM/BR/75/M2904 2.4 No Trypanosoma vivax No Trypanosoma cruzi strain CL Brener No Trypanosoma congolense 2.4 No Trypanosoma brucei gambiense v4.1 No Trypanosoma brucei TREU927 v4.1 No Ectocarpus siliculosus No Aureococcus anophagefferens No Albugo laibachii 22 No Pythium iwayamai DAOM BR242034 22 No Pythium arrhenomanes ATCC 12531 22 No Pythium ultimum v1.7-2 No Pythium aphanidermatum DAOM BR444 22 No Pythium irregulare DAOM BR486 22 No Pythium vexans DAOM BR484 22 No Phytophthora ramorum 1.1 - Sudden oak death agentNo Phytophthora sojae 1.1 No Phytophthora infestans T30-4 No Phytophthora capsici No Hyaloperonospora arabidopsidis 22 No Phaeodactylum tricornutum CCAP 1055/1No Fragilariopsis cylindrus No Thalassiosira pseudonana CCMP1335No Perkinsus marinus ATCC 50983 No Paramecium tetraurelia No Tetrahymena thermophila SB210 1 No Ichthyophthirius multifiliis strain G5 No Neospora caninum No Toxoplasma gondii VEGNo Toxoplasma gondii ME49No Toxoplasma gondii GT1No Babesia bovis T2Bo No Theileria parva No Theileria annulata No Plasmodium falciparum 3D7 No Plasmodium yoelii ssp. yoelii 1 No Plasmodium chabaudi No Plasmodium berghei ANKA No Symbiodinium minutum clade B1 v1.2 No Naegleria gruberi No Guillardia theta CCMP2712 v1.0 No Emiliania huxleyi CCMP1516 No Leptolyngbya sp. PCC 7376 No Acaryochloris marina MBIC11017No Synechococcus elongatus PCC 7942No Geitlerinema sp. PCC 7407 No Cyanothece sp. PCC 8802No Microcystis aeruginosa NIES-843No Rivularia sp. PCC 7116 No Anabaena variabilis ATCC 29413No Nostoc sp. PCC 7107 No Nostoc sp. PCC 7120No Nostoc sp. PCC 7524 No Actinosynnema mirum DSM 43827No Nocardioides sp. JS614No Carnobacterium sp. 17-4No Carnobacterium sp. WN1359 No Tetragenococcus halophilus NBRC 12172No Enterococcus sp. 7L76 No Enterococcus faecium Aus0004No Enterococcus faecalis 62No Oenococcus oeni PSU-1No Leuconostoc sp. C2No Leuconostoc kimchii IMSNU 11154No Leuconostoc citreum KM20No Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293No Leuconostoc gasicomitatum LMG 18811No Lactobacillus casei ATCC 334No Lactobacillus rhamnosus Lc 705No Lactobacillus fermentum IFO 3956No Lactobacillus plantarum JDM1No Lactobacillus helveticus DPC 4571No Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365No Lactobacillus buchneri NRRL B-30929No Lactobacillus brevis ATCC 367No Pediococcus claussenii ATCC BAA-344No Pediococcus pentosaceus ATCC 25745No Streptococcus infantarius subsp. infantarius CJ18No Streptococcus mutans NN2025No Streptococcus thermophilus LMD-9No Streptococcus salivarius 57.INo Paenibacillus terrae HPL-003No Paenibacillus mucilaginosus 3016No Paenibacillus polymyxa M1No Listeria welshimeri serovar 6b str. SLCC5334No Listeria innocua Clip11262No Listeria seeligeri serovar 1/2b str. SLCC3954No Listeria monocytogenes serotype 4b str. CLIP 80459No Listeria ivanovii subsp. ivanovii PAM 55No Solibacillus silvestris StLB046No Bacillus halodurans C-125No Bacillus pseudofirmus OF4No Bacillus clausii KSM-K16No Saprospira grandis str. LewinNo Fibrella aestuarina No Krokinobacter sp. 4H-3-7-5No Rhodopirellula baltica SH 1No Thermovibrio ammonificans HB-1No Sulfurihydrogenibium sp. YO3AOP1No Sulfurihydrogenibium azorense Az-Fu1No Persephonella marina EX-H1No Candidatus Nitrospira defluviiNo Arcobacter nitrofigilis DSM 7299No Campylobacter lari RM2100No Sulfurimonas denitrificans DSM 1251No Helicobacter cetorum MIT 00-7128No Helicobacter bizzozeronii CIII-1No Helicobacter hepaticus ATCC 51449No Helicobacter mustelae 12198No Helicobacter felis ATCC 49179No Helicobacter acinonychis str. SheebaNo Helicobacter pylori B38No Nitratiruptor sp. SB155-2No Sulfurovum sp. NBC37-1No Haliangium ochraceum DSM 14365No Corallococcus coralloides DSM 2259No Myxococcus fulvus HW-1No Dechloromonas aromatica RCBNo Thauera sp. MZ1TNo Azoarcus sp. KH32C No Azoarcus sp. BH72No Dechlorosoma suillum PSNo Neisseria gonorrhoeae NCCP11945No Candidatus Accumulibacter phosphatis clade IIA str. UW-1No Rubrivivax gelatinosus IL144No Leptothrix cholodnii SP-6No Ralstonia eutropha JMP134No Cupriavidus taiwanensis LMG 19424No Cupriavidus necator N-1No Ralstonia eutropha H16No Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1No Burkholderia cenocepacia HI2424No Acidovorax sp. KKS102 No Thiobacillus denitrificans ATCC 25259No Nitrosospira multiformis ATCC 25196No Nitrosomonas sp. Is79A3No Nitrosomonas eutropha C91No Nitrosomonas europaea ATCC 19718No Gallionella capsiferriformans ES-2No Methylotenera versatilis 301No Methylotenera mobilis JLW8No Asticcacaulis excentricus CB 48No Brevundimonas subvibrioides ATCC 15264No Hirschia baltica ATCC 49814No Phaeobacter gallaeciensis 2.10No Roseobacter litoralis Och 149No Roseobacter denitrificans OCh 114No Magnetospirillum magneticum AMB-1No Rhodospirillum centenum SWNo Rhodospirillum rubrum F11No Xanthobacter autotrophicus Py2No Methylobacterium sp. 4-46No Sinorhizobium fredii NGR234No Sinorhizobium medicae WSM419No Sinorhizobium meliloti AK83No Mesorhizobium opportunistum WSM2075No Mesorhizobium ciceri biovar biserrulae WSM1271No Mesorhizobium loti MAFF303099No Methylocella silvestris BL2No Rhodopseudomonas palustris BisA53No Bradyrhizobium japonicum USDA 110No Bradyrhizobium sp. ORS 278No Teredinibacter turnerae T7901No Pasteurella multocida subsp. multocida str. 3480No Haemophilus parainfluenzae T3T1No Oceanimonas sp. GK1No Tolumonas auensis DSM 9187No Aeromonas veronii B565No Aeromonas salmonicida subsp. salmonicida A449No Aeromonas hydrophila subsp. hydrophila ATCC 7966No Aliivibrio salmonicida LFI1238No Vibrio fischeri MJ11No Vibrio sp. Ex25No Vibrio harveyi ATCC BAA-1116No Vibrio parahaemolyticus RIMD 2210633No Vibrio splendidus LGP32No Vibrio anguillarum 775No Vibrio furnissii NCTC 11218No Vibrio vulnificus MO6-24/ONo Vibrio cholerae O395No Photobacterium profundum SS9No Psychromonas ingrahamii 37No Ferrimonas balearica DSM 9799No Shewanella baltica OS185No Shewanella woodyi ATCC 51908No Shewanella violacea DSS12No Shewanella frigidimarina NCIMB 400No Colwellia psychrerythraea 34HNo Glaciecola nitratireducens FR1064No Hahella chejuensis KCTC 2396No Alcanivorax borkumensis SK2No Marinomonas sp. MWYL1No Methylomicrobium alcaliphilum No Methylococcus capsulatus str. BathNo Xanthomonas axonopodis pv. citri str. 306No Xanthomonas campestris pv. campestris str. B100No Allochromatium vinosum DSM 180No Thiocystis violascens DSM 198No Nitrosococcus halophilus Nc4No Nitrosococcus oceani ATCC 19707No Xenorhabdus nematophila ATCC 19061No Rahnella sp. Y9602No Rahnella aquatilis CIP 78.65 = ATCC 33071No Serratia sp. AS12No Serratia plymuthica AS9No Serratia proteamaculans 568No Pectobacterium wasabiae WPP163No Pectobacterium sp. SCC3193 No Pectobacterium atrosepticum SCRI1043No Pectobacterium carotovorum subsp. carotovorum PC1No Pantoea vagans C9-1No Cronobacter turicensis z3032No Salmonella bongori NCTC 12419No Klebsiella oxytoca E718No Enterobacter sp. 638No Enterobacter asburiae LF7aNo Enterobacter cloacae subsp. dissolvens SDMNo Citrobacter koseri ATCC BAA-895No Pseudomonas sp. UW4 No Pseudomonas mendocina ympNo Thiomicrospira crunogena XCL-2No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frogNo Drosophila melanogaster FlyBase 5.12 - Fruit flyNo Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquitoNo Ascaris suum Victoria/Ghent No Caenorhabditis elegans WormBase WS218 - RoundwormNo Coccidioides posadasii str. Silveira No Coccidioides immitis RMSCC 3703 No Coccidioides immitis RMSCC 2394 No Coccidioides immitis H538.4 No Ajellomyces dermatitidis ER-3 No Batrachochytrium dendrobatidis JEL423 No Batrachochytrium dendrobatidis JAM81 No Theobroma cacao Matina 1-6 v0.9 - CacaoNo Hordeum vulgare 22 - Domesticated barleyNo Oryza sativa ssp. Indica - Long-grained riceNo Trypanosoma brucei Lister 427 v4.1 No Neospora caninum Nc-Liverpool 6.2 No Plasmodium falciparum HB3 No Plasmodium falciparum Dd2 No Chamaesiphon minutus PCC 6605No Synechococcus sp. PCC 7002No Synechococcus elongatus PCC 6301No Cyanothece sp. PCC 7822No Cyanothece sp. PCC 7424No Cyanothece sp. ATCC 51142No Cyanothece sp. PCC 8801No Anabaena cylindrica PCC 7122No Saccharothrix espanaensis DSM 44229No Amycolatopsis orientalis HCCB10007No Nocardia brasiliensis ATCC 700358No Leifsonia xyli subsp. cynodontis DSM 46306No Carnobacterium maltaromaticum LMA28No Enterococcus mundtii QU 25No Enterococcus casseliflavus EC20No Enterococcus faecium Aus0085No Enterococcus faecium NRRL B-2354No Enterococcus faecium DONo Enterococcus faecalis str. Symbioflor 1No Enterococcus faecalis D32No Enterococcus faecalis OG1RFNo Enterococcus faecalis V583No Leuconostoc carnosum JB16No Leuconostoc mesenteroides subsp. mesenteroides J18No Leuconostoc gelidum JB7No Lactobacillus paracasei subsp. paracasei 8700:2No Lactobacillus casei LOCK919No Lactobacillus casei W56No Lactobacillus casei LC2WNo Lactobacillus casei BD-IINo Lactobacillus casei BL23No Lactobacillus casei str. ZhangNo Lactobacillus rhamnosus LOCK908No Lactobacillus rhamnosus LOCK900No Lactobacillus rhamnosus ATCC 8530No Lactobacillus rhamnosus GGNo Lactobacillus rhamnosus GGNo Lactobacillus fermentum F-6No Lactobacillus plantarum 16No Lactobacillus plantarum ZJ316No Lactobacillus plantarum subsp. plantarum ST-IIINo Lactobacillus plantarum subsp. plantarum P-8No Lactobacillus plantarum WCFS1No Lactobacillus delbrueckii subsp. bulgaricus ND02No Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842No Lactobacillus delbrueckii subsp. bulgaricus 2038No Lactobacillus brevis KB290No Pediococcus pentosaceus SL4No Streptococcus mutans GS-5No Streptococcus mutans LJ23No Streptococcus mutans UA159No Streptococcus thermophilus MN-ZLW-002No Streptococcus thermophilus JIM 8232No Streptococcus thermophilus ND03No Streptococcus thermophilus CNRZ1066No Streptococcus thermophilus LMG 18311No Streptococcus salivarius CCHSS3No Streptococcus salivarius JIM8777No Paenibacillus mucilaginosus KNP414No Paenibacillus mucilaginosus K02No Paenibacillus polymyxa CR1No Paenibacillus polymyxa SC2No Paenibacillus polymyxa E681No Listeria monocytogenes EGD sequenceNo Listeria monocytogenes N53-1No Listeria monocytogenes La111No Listeria monocytogenes serotype 4b str. LL195No Listeria monocytogenes 07PF0776No Listeria monocytogenes M7No Listeria monocytogenes J1-220No Listeria monocytogenes J1816No Listeria monocytogenes SLCC2376No Listeria monocytogenes SLCC5850No Listeria monocytogenes ATCC 19117No Listeria monocytogenes L312No Listeria monocytogenes SLCC2479No Listeria monocytogenes SLCC7179No Listeria monocytogenes SLCC2540No Listeria monocytogenes SLCC2378No Listeria monocytogenes serotype 1/2b str. SLCC2755No Listeria monocytogenes serotype 1/2c str. SLCC2372No Listeria monocytogenes serotype 7 str. SLCC2482No Listeria monocytogenes 08-5578No Listeria monocytogenes 08-5923No Listeria monocytogenes L99No Listeria monocytogenes HCC23No Listeria monocytogenes 10403SNo Listeria monocytogenes J0161No Listeria monocytogenes Finland 1998No Listeria monocytogenes FSL R2-561No Listeria monocytogenes serotype 4b str. F2365No Listeria monocytogenes EGD-eNo Singulisphaera acidiphila DSM 18658No Helicobacter cetorum MIT 99-5656No Helicobacter pylori BM012SNo Helicobacter pylori BM012ANo Helicobacter pylori SouthAfrica20No Helicobacter pylori UM298No Helicobacter pylori UM066No Helicobacter pylori UM037No Helicobacter pylori UM299No Helicobacter pylori UM032No Helicobacter pylori OK310No Helicobacter pylori OK113No Helicobacter pylori Rif2No Helicobacter pylori Rif1No Helicobacter pylori HUP-B14No Helicobacter pylori PeCan18No Helicobacter pylori Shi169No Helicobacter pylori Shi112No Helicobacter pylori Shi417No Helicobacter pylori XZ274No Helicobacter pylori Aklavik86No Helicobacter pylori Aklavik117No Helicobacter pylori SNT49No Helicobacter pylori Puno135No Helicobacter pylori Puno120No Helicobacter pylori ELS37No Helicobacter pylori Gambia94/24No Helicobacter pylori SouthAfrica7No Helicobacter pylori India7No Helicobacter pylori Lithuania75No Helicobacter pylori 2017No Helicobacter pylori 2018No Helicobacter pylori 908No Helicobacter pylori F57No Helicobacter pylori F30No Helicobacter pylori F16No Helicobacter pylori Sat464No Helicobacter pylori Cuz20No Helicobacter pylori PeCan4No Helicobacter pylori SJM180No Helicobacter pylori B8No Helicobacter pylori 52No Helicobacter pylori v225dNo Helicobacter pylori 83No Helicobacter pylori 35ANo Helicobacter pylori P12No Helicobacter pylori G27No Helicobacter pylori Shi470No Helicobacter pylori HPAG1No Helicobacter pylori 51No Helicobacter pylori F32No Helicobacter pylori J99No Helicobacter pylori 26695No Helicobacter pylori 26695No Neisseria gonorrhoeae TCDC-NG08107No Neisseria gonorrhoeae FA 1090No Burkholderia cenocepacia MC0-3No Burkholderia cenocepacia AU 1054No Candidatus Symbiobacter mobilis Comamonadaceae bacterium CRNo Nitrosomonas sp. AL212No Phaeobacter gallaeciensis DSM 17395No Phaeobacter gallaeciensis DSM 26640No Rhodospirillum rubrum ATCC 11170No Sinorhizobium fredii USDA 257No Sinorhizobium fredii HH103No Sinorhizobium meliloti GR4No Sinorhizobium meliloti Rm41No Sinorhizobium meliloti SM11No Sinorhizobium meliloti 1021No Rhizobium etli bv. mimosae str. Mim1No Mesorhizobium australicum WSM2073No Hyphomicrobium nitrativorans NL23No Rhodopseudomonas palustris DX-1No Rhodopseudomonas palustris TIE-1No Rhodopseudomonas palustris HaA2No Rhodopseudomonas palustris BisB5No Rhodopseudomonas palustris BisB18No Rhodopseudomonas palustris CGA009No Bradyrhizobium sp. S23321No Bradyrhizobium sp. BTAi1No Bradyrhizobium oligotrophicum S58No Mannheimia succiniciproducens MBEL55ENo Mannheimia haemolytica USMARC_2286No Mannheimia haemolytica M42548No Mannheimia haemolytica D174No Mannheimia haemolytica D153No Mannheimia haemolytica USDA-ARS-USMARC-183No Mannheimia haemolytica USDA-ARS-USMARC-185No Pasteurella multocida 36950No Pasteurella multocida subsp. multocida str. HN06No Pasteurella multocida subsp. multocida str. Pm70No Actinobacillus suis H91-0380No Aeromonas hydrophila ML09-119No Vibrio fischeri ES114No Vibrio sp. EJY3No Vibrio parahaemolyticus BB22OPNo Vibrio alginolyticus NBRC 15630 = ATCC 17749No Vibrio anguillarum Listonella anguillarum M3No Vibrio vulnificus CMCP6No Vibrio vulnificus YJ016No Vibrio cholerae LMA3984-4No Vibrio cholerae M66-2No Vibrio cholerae O395No Vibrio cholerae IEC224No Vibrio cholerae O1 str. 2010EL-1786No Vibrio cholerae MJ-1236No Vibrio cholerae O1 biovar El Tor str. N16961No Shewanella baltica OS678No Shewanella baltica OS223No Shewanella baltica OS195No Xanthomonas campestris pv. vesicatoria str. 85-10No Xanthomonas axonopodis pv. citrumelo F1No Xanthomonas axonopodis Xac29-1No Xanthomonas campestris pv. raphani 756CNo Xanthomonas campestris pv. campestris str. 8004No Xanthomonas campestris pv. campestris str. ATCC 33913No Thioflavicoccus mobilis 8321No Rahnella aquatilis HX2No Yersinia enterocolitica subsp. palearctica 105.5R(r)No Yersinia enterocolitica subsp. palearctica Y11No Serratia sp. AS13No Serratia plymuthica S13No Serratia plymuthica 4Rx13No Pectobacterium carotovorum subsp. carotovorum PCC21No Cronobacter sakazakii CMCC 45402No Salmonella bongori N268-08No Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980No Klebsiella oxytoca KCTC 1686No Enterobacter cloacae EcWSU1No Enterobacter cloacae subsp. cloacae ENHKU01No Enterobacter cloacae subsp. cloacae NCTC 9394No Enterobacter cloacae subsp. cloacae ATCC 13047No Acinetobacter johnsonii SH046No Acinetobacter lwoffii SH145No Homo sapiens 69_37 - HumanNo Pan troglodytes 69_2.1.4 - ChimpanzeeNo Gorilla gorilla 69_3.1 - Western gorillaNo Pongo abelii 69_2 - Sumatran orangutanNo Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbonNo Macaca mulatta 69_1 - Rhesus monkeyNo Callithrix jacchus 69_3.2.1 - White-tufted-ear marmosetNo Otolemur garnettii 69_3 - Small-eared galagoNo Tarsius syrichta 69_1 No Microcebus murinus 69_1 - Gray mouse lemurNo Rattus norvegicus 69_3.4 - Norway ratNo Mus musculus 69_38 - House mouseNo Dipodomys ordii 69_1 - Ord's kangaroo ratNo Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrelNo Cavia porcellus 69_3 - Domestic guinea pigNo Oryctolagus cuniculus 69_2 - RabbitNo Ochotona princeps 69 - American pikaNo Tupaia belangeri 69 - Northern tree shrewNo Sus scrofa 69_10.2 - PigNo Bos taurus 69_3.1 - CattleNo Vicugna pacos 69_1 - AlpacaNo Tursiops truncatus 69_1 - Bottlenose dolphinNo Mustela putorius furo 69_1.0 - Domestic ferretNo Ailuropoda melanoleuca 69_1 - Giant pandaNo Canis familiaris 69_3.1 - DogNo Felis catus 69 - Domestic catNo Equus caballus 69_2 - HorseNo Myotis lucifugus 69_2.0 - Little brown batNo Pteropus vampyrus 69_1 - Large flying foxNo Sorex araneus 69_1 - European shrewNo Erinaceus europaeus 69 - Western European hedgehogNo Procavia capensis 69_1 - Cape rock hyraxNo Loxodonta africana 69_3 - African savanna elephantNo Echinops telfairi 69 - Small Madagascar hedgehogNo Dasypus novemcinctus 69_2 - Nine-banded armadilloNo Choloepus hoffmanni 69_1 - Hoffmann's two-fingered slothNo Macropus eugenii 69_1.0 - Tammar wallabyNo Sarcophilus harrisii 69_7.0 - Tasmanian devilNo Monodelphis domestica 69_5 - Gray short-tailed opossumNo Ornithorhynchus anatinus 69_5 - PlatypusNo Petromyzon marinus 69_7.0 - Sea lampreyNo Meleagris gallopavo 69_2 - TurkeyNo Gallus gallus 69_2 - ChickenNo Taeniopygia guttata 69_3.2.4 - Zebra finchNo Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtleNo Anolis carolinensis 69_2.0 - Green anoleNo Xenopus tropicalis 69_4.2 - Tropical clawed frogNo Latimeria chalumnae 69_1 - CoelacanthNo Gadus morhua 69_1 - Atlantic codNo Tetraodon nigroviridis 69_8 - Spotted green pufferfishNo Takifugu rubripes 69_4 - TorafuguNo Gasterosteus aculeatus 69_1 - Three-spined sticklebackNo Oryzias latipes 69_1 - Japanese medakaNo Xiphophorus maculatus 69_4.4.2 - Southern platyfishNo Oreochromis niloticus 69_1.0 - Nile tilapiaNo Danio rerio 69_9 - ZebrafishNo Ciona savignyi 69_2.0 - Pacific transparent sea squirtNo Ciona intestinalis 69 - Vase tunicateNo Drosophila melanogaster 69_5 - Fruit flyNo Caenorhabditis elegans 69_215 - RoundwormNo Arabidopsis thaliana 10 - Thale cressNo Homo sapiens 75_37 - HumanNo Homo sapiens No Mus musculus 63_37 (longest transcript per gene) - House mouseNo Heliconius numata No Loa loa v3.3 - Eye wormNo Wuchereria bancrofti v1.0 - Agent of lymphatic filariasisNo Brugia malayi v1.0 - Agent of lymphatic filariasisNo Moniliophthora perniciosa FA553 No Picea sitchensis No Lotus japonicus No Malus x domestica - AppleNo Ricinus communis No Nicotiana benthamiana 0.4.4 No Solanum pimpinellifolium A-1.0 - Currant tomatoNo Solanum lycopersicum v2.3 - TomatoNo Phoenix dactylifera No Vibrio campbellii ATCC BAA-1116No 5_050719P (meta-genome)No Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)No Atta cephalotes fungus garden (ACEF) (meta-genome)No Combined (meta-genome)No Cyphomyrmex longiscapus fungus garden (meta-genome)No Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)No Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)No Dump bottom (Dump bottom) (meta-genome)No Dump top (Dump top) (meta-genome)No Endophytic microbiome from Rice (meta-genome)No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)No Freshwater propionate enrichment of Brocadia fulgida (meta-genome)No Fungus garden combined (combined) (meta-genome)No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)No Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)No Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) No Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) No Marine anammox bioreactor enriched for Scalindua species (meta-genome)No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)No Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) No Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) No Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)No NCBI 2017_08 genome No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)No Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)No Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)No Protozoadb 2010_08 (Protozoadb)No simHC - Simulated High Complexity Metagenome (meta-genome)No simLC - Simulated Low Complexity Metagenome (meta-genome)No simMC - Simulated Medium Complexity Metagenome (meta-genome)No Sludge/Australian, Phrap Assembly (meta-genome)No Sludge/US, Jazz Assembly (meta-genome)No Sludge/US, Phrap Assembly (meta-genome)No Soil microbial communities from Minnesota Farm (meta-genome)No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)No STRING v9.0.5 (STRING)No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)No Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) No Uniprot 2018_03 genome No Global Ocean Sampling Expedition (GOS) No NCBI plasmid sequences (Plasmids) No NCBI viral sequences (Viral) No PDB chains (SCOP 1.75 ) (PDB) No Protein Data Bank (all PDB sequenc) No SCOP2 SCOPe CATH ECOD (all domain sequ) No TargetDB No The Salmonella enterica Pan-genome (meta-genome) No UniProt ALL (only advised for small superfamilies)
