Select to display Genome No Danio rerio 58 (pseudogenes) - ZebrafishNo Gallus gallus 58 (pseudogene) - ChickenNo Homo sapiens 58 (pseudogenes) - HumanNo Pan troglodytes 58 (pseudogenes) - ChimpanzeeNo Homo sapiens 76_38 - HumanNo Pan troglodytes 76_2.1.4 - ChimpanzeeNo Gorilla gorilla 76_3.1 - Western gorillaNo Pongo abelii 76_2 - Sumatran orangutanNo Tarsius syrichta 76_1 No Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbonNo Papio anubis 76 - Olive baboonNo Macaca mulatta 76_1 - Rhesus monkeyNo Callithrix jacchus 76_3.2.1 - White-tufted-ear marmosetNo Otolemur garnettii 76_3 - Small-eared galagoNo Microcebus murinus 76_1 - Gray mouse lemurNo Physcomitrella patens subsp. patens 22 No Rattus norvegicus 76_5.0 - Norway ratNo Mus musculus 76_38 - House mouseNo Dipodomys ordii 76_1 - Ord's kangaroo ratNo Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrelNo Heterocephalus glaber v1.7-2 - Naked mole-ratNo Cavia porcellus 76_3 - Domestic guinea pigNo Oryctolagus cuniculus 76_2 - RabbitNo Ochotona princeps 76 - American pikaNo Tupaia belangeri 76 - Northern tree shrewNo Sus scrofa 76_10.2 - PigNo Bos taurus 76_3.1 - CattleNo Ovis aries 76_3.1 - SheepNo Vicugna pacos 76_1 - AlpacaNo Tursiops truncatus 76_1 - Bottlenose dolphinNo Mustela putorius furo 76_1.0 - Domestic ferretNo Ailuropoda melanoleuca 76_1 - Giant pandaNo Canis familiaris 76_3.1 - DogNo Felis catus 76_6.2 - Domestic catNo Equus caballus 76_2 - HorseNo Myotis lucifugus 76_2.0 - Little brown batNo Pteropus vampyrus 76_1 - Large flying foxNo Sorex araneus 76_1 - European shrewNo Erinaceus europaeus 76 - Western European hedgehogNo Procavia capensis 76_1 - Cape rock hyraxNo Loxodonta africana 76_3 - African savanna elephantNo Echinops telfairi 76 - Small Madagascar hedgehogNo Dasypus novemcinctus 76_2 - Nine-banded armadilloNo Choloepus hoffmanni 76_1 - Hoffmann's two-fingered slothNo Macropus eugenii 76_1.0 - Tammar wallabyNo Sarcophilus harrisii 76_7.0 - Tasmanian devilNo Monodelphis domestica 76_5 - Gray short-tailed opossumNo Ornithorhynchus anatinus 76_5 - PlatypusNo Saccoglossus kowalevskii v3.0 No Petromyzon marinus 76_7.0 - Sea lampreyNo Meleagris gallopavo 76_2 - TurkeyNo Gallus gallus 76_4 - ChickenNo Anas platyrhynchos 76_1.0 - MallardNo Taeniopygia guttata 76_3.2.4 - Zebra finchNo Ficedula albicollis 76_1.0 - Collared flycatcherNo Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtleNo Anolis carolinensis 76_2.0 - Green anoleNo Xenopus laevis No Xenopus tropicalis 76_4.2 - Tropical clawed frogNo Latimeria chalumnae 76_1 - CoelacanthNo Lepisosteus oculatus 76 - Spotted garNo Gadus morhua 76_1 - Atlantic codNo Tetraodon nigroviridis 76_8 - Spotted green pufferfishNo Takifugu rubripes 76_4 - TorafuguNo Gasterosteus aculeatus 76_1 - Three-spined sticklebackNo Oryzias latipes 76_1 - Japanese medakaNo Xiphophorus maculatus 76_4.4.2 - Southern platyfishNo Poecilia formosa 76 - Amazon mollyNo Oreochromis niloticus 76_1.0 - Nile tilapiaNo Astyanax mexicanus 76 - Mexican tetraNo Danio rerio 76_9 - ZebrafishNo Oikopleura dioica No Ciona savignyi 76_2.0 - Pacific transparent sea squirtNo Ciona intestinalis 76 - Vase tunicateNo Strongylocentrotus purpuratus v3.1 - Purple sea urchinNo Adineta vaga No Octopus bimaculoides 280 No Crassostrea gigas 22 - Pacific oysterNo Lottia gigantea No Helobdella robusta No Capitella sp. I No Danaus plexippus OGS1.0 - Monarch butterflyNo Heliconius melpomene No Bombyx mori No Nasonia vitripennis No Apis mellifera 38.2d - Honey beeNo Harpegnathos saltator v3.3 - Jerdon's jumping antNo Linepithema humile v1.1 - Argentine antNo Pogonomyrmex barbatus v1.2 - Red harvester antNo Solenopsis invicta v.2.2.3 - Red fire antNo Acromyrmex echinatior v3.8 - Panamanian leafcutter antNo Atta cephalotes v1.1 No Camponotus floridanus v3.3 - Florida carpenter antNo Lucilia cuprina - Australian sheep blowflyNo Drosophila grimshawi 1.3 No Drosophila willistoni 1.3 No Drosophila pseudoobscura 2.13 No Drosophila persimilis 1.3 No Drosophila suzukii No Drosophila yakuba 1.3 No Drosophila simulans 1.3 No Drosophila sechellia 1.3 No Drosophila melanogaster 76_5 - Fruit flyNo Drosophila erecta 1.3 No Drosophila ananassae 1.3 No Drosophila virilis 1.2 No Drosophila mojavensis 1.3 No Megaselia scalaris 22 No Aedes aegypti 55 - Yellow fever mosquitoNo Culex pipiens quinquefasciatus No Anopheles darlingi 22 - American malaria mosquitoNo Anopheles gambiae 49_3j - African malaria mosquitoNo Tribolium castaneum 3.0 - Red flour beetleNo Pediculus humanus corporis No Acyrthosiphon pisum No Rhodnius prolixus 22 No Daphnia pulex No Strigamia maritima 22 No Sarcoptes scabiei No Tetranychus urticae No Ixodes scapularis No Pristionchus pacificus No Meloidogyne incognita No Meloidogyne hapla No Onchocerca volvulus 22 No Brugia malayi WS250 - Agent of lymphatic filariasisNo Caenorhabditis japonica No Caenorhabditis brenneri No Caenorhabditis remanei No Caenorhabditis elegans 76_235 - RoundwormNo Caenorhabditis briggsae 2 No Trichinella spiralis 22 No Hymenolepis microstoma No Echinococcus multilocularis No Echinococcus granulosus No Taenia solium No Schistosoma mansoni No Mnemiopsis leidyi - Sea walnutNo Thelohanellus kitauei No Acropora digitifera v1.0No Nematostella vectensis 1.0 - Starlet sea anemoneNo Hydra vulgaris No Amphimedon queenslandica No Trichoplax adhaerens No Proterospongia sp. ATCC 50818 No Monosiga brevicollis No Sphaeroforma arctica JP610 No Capsaspora owczarzaki ATCC 30864 No Conidiobolus coronatus NRRL28638 v1.0No Mortierella verticillata NRRL 6337 No Phycomyces blakesleeanus No Rhizopus oryzae RA 99-880 No Mucor circinelloides No Rhizomucor miehei CAU432 No Malassezia globosa CBS 7966 No Sporisorium reilianum 22 No Ustilago maydis No Mixia osmundae IAM 14324 v1.0No Cronartium quercuum f. sp. fusiforme G11 v1.0No Puccinia graminis f. sp. tritici CRL 75-36-700-3 No Melampsora laricis-populina No Rhodotorula graminis WP1 v1.0 No Sporobolomyces roseus IAM 13481 No Microbotryum violaceum 22 No Wallemia sebi v1.0 No Sphaerobolus stellatus v1.0No Piloderma croceum F 1598 v1.0No Serpula lacrymans var. lacrymans S7.9 No Coniophora puteana No Hydnomerulius pinastri v2.0No Paxillus rubicundulus Ve08.2h10 v1.0No Pisolithus microcarpus 441 v1.0No Pisolithus tinctorius Marx 270 v1.0No Scleroderma citrinum Foug A v1.0No Coprinopsis cinerea okayama7 130 v3 No Pleurotus ostreatus No Amanita thiersii Skay4041 v1.0No Amanita muscaria Koide v1.0 - Fly agaricNo Galerina marginata v1.0No Hebeloma cylindrosporum h7 v2.0No Laccaria bicolor S238N-H82 No Agaricus bisporus var. bisporus No Schizophyllum commune No Stereum hirsutum FP-91666 SS1 v1.0 No Heterobasidion annosum No Gloeophyllum trabeum v1.0 No Punctularia strigosozonata v1.0 No Sebacina vermifera MAFF 305830 v1.0No Fomitiporia mediterranea v1.0 No Tulasnella calospora AL13/4D v1.0No Postia placenta No Wolfiporia cocos MD-104 SS10 v1.0 No Fomitopsis pinicola v1.0 No Fomitopsis pinicola FP-58527 SS1 v3.0No Phanerochaete chrysosporium RP-78 2.1 No Dichomitus squalens No Trametes versicolor v1.0 No Tremella mesenterica No Daldinia eschscholzii EC12 v1.0No Apiospora montagnei NRRL 25634 v1.0No Magnaporthe poae ATCC 64411 22 No Magnaporthe grisea 70-15 No Podospora anserina No Sporotrichum thermophile ATCC 42464 No Thielavia terrestris NRRL 8126 No Chaetomium globosum CBS 148.51 No Neurospora tetrasperma No Neurospora discreta FGSC 8579 No Neurospora crassa OR74A No Cryphonectria parasitica No Verticillium albo-atrum VaMs.102 No Verticillium dahliae VdLs.17 No Acremonium alcalophilum v 1.0 No Glomerella graminicola 22 No Fusarium graminearum No Nectria haematococca mpVI No Fusarium oxysporum f. sp. lycopersici 4286 No Fusarium verticillioides 7600 No Trichoderma asperellum CBS 433.97 v1.0No Trichoderma atroviride No Trichoderma citrinoviride v1.0No Trichoderma reesei 1.2 No Trichoderma virens Gv29-8 No Trichoderma longibrachiatum ATCC 18648 v1.0No Trichoderma harzianum CBS 226.95 v1.0No Amorphotheca resinae v1.0 - Creosote fungusNo Botrytis cinerea B05.10 No Sclerotinia sclerotiorum No Blumeria graminis 22 No Didymella exigua CBS 183.55 v1.0No Leptosphaeria maculans 22 No Setosphaeria turcica v1.0 No Cochliobolus miyabeanus ATCC 44560 v1.0No Cochliobolus victoriae FI3 v1.0No Cochliobolus carbonum 26-R-13 v1.0No Cochliobolus heterostrophus No Alternaria brassicicola No Cochliobolus lunatus m118 v2.0No Pyrenophora teres f. teres 22 No Pyrenophora tritici-repentis No Stagonospora nodorum No Mycosphaerella graminicola IPO323 No Microsporum gypseum No Zasmidium cellare ATCC 36951 v1.0No Dothistroma septosporum No Septoria musiva v1.0 No Mycosphaerella fijiensis CIRAD86 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0No Paracoccidioides brasiliensis Pb18 No Coccidioides posadasii RMSCC 3488 No Coccidioides immitis RS No Ajellomyces dermatitidis SLH14081 No Histoplasma capsulatum class NAmI strain WU24 No Microsporum canis CBS 113480 No Trichophyton equinum CBS 127.97 No Trichophyton verrucosum HKI 0517 No Arthroderma benhamiae CBS 112371 No Trichophyton tonsurans CBS 112818 No Trichophyton rubrum CBS 118892 No Uncinocarpus reesii 1704 No Aspergillus zonatus v1.0No Penicillium chrysogenum Wisconsin 54-1255 No Penicillium chrysogenum v1.0No Aspergillus acidus v1.0No Aspergillus fumigatus Af293No Aspergillus brasiliensis v1.0No Aspergillus nidulans FGSC A4 No Aspergillus sydowii v1.0No Aspergillus versicolor v1.0No Aspergillus glaucus No Aspergillus carbonarius ITEM 5010 No Neosartorya fischeri NRRL 181 No Aspergillus terreus NIH2624 No Aspergillus tubingensis v1.0No Aspergillus wentii v1.0No Aspergillus oryzae RIB40 No Aspergillus niger 22 No Aspergillus niger ATCC 1015 No Aspergillus flavus NRRL3357 No Aspergillus clavatus NRRL 1 No Penicillium marneffei ATCC 18224 No Tuber melanosporum Mel28 22 No Tuber melanosporum Vittad No Hansenula polymorpha v2.0 No Dekkera bruxellensis CBS 2499 v2.0No Pichia membranifaciens v1.0 No Candida tanzawaensis NRRL Y-17324 v1.0No Candida dubliniensis CD36 No Candida tropicalis MYA-3404 No Candida parapsilosis No Candida albicans SC5314No Lodderomyces elongisporus NRRL YB-4239 No Babjeviella inositovora NRRL Y-12698 v1.0No Pichia stipitis CBS 6054 No Candida guilliermondii ATCC 6260 No Hyphopichia burtonii NRRL Y-1933 v1.0No Debaromyces hansenii No Wickerhamomyces anomalus No Pichia pastoris GS115 No Hanseniaspora valbyensis NRRL Y-1626 v1.1No Yarrowia lipolytica CLIB122No Candida lusitaniae ATCC 42720 No Metschnikowia bicuspidata NRRL YB-4993 v1.0No Vanderwaltozyma polyspora DSM 70294 No Candida glabrata CBS138No Kluyveromyces thermotolerans CBS 6340No Lachancea kluyveri No Kluyveromyces waltii No Ashbya gossypii ATCC 10895 No Zygosaccharomyces rouxii No Saccharomyces mikatae MIT No Saccharomyces paradoxus MIT No Saccharomyces cerevisiae 76 - Baker's yeastNo Saccharomyces bayanus MIT No Kluyveromyces lactis No Schizosaccharomyces cryophilus OY26 22 No Schizosaccharomyces octosporus yFS286 No Schizosaccharomyces japonicus yFS275 No Schizosaccharomyces pombe - Fission yeastNo Catenaria anguillulae PL171 v1.0No Allomyces macrogynus ATCC 38327 No Spizellomyces punctatus DAOM BR117 No Dictyostelium discoideum No Dictyostelium purpureum No Entamoeba dispar 1.2 No Entamoeba invadens 1.2 No Entamoeba histolytica 1 No Selaginella moellendorffii No Pinus taeda - Loblolly pineNo Picea abies - Norway spruceNo Eucalyptus grandis v201 - Rose gumNo Theobroma cacao B97-61/B2 v1 - CacaoNo Gossypium raimondii v221 No Citrus clementina v165 No Citrus sinensis v154 - Sweet orangeNo Thellungiella halophila v173 No Brassica rapa Chiifu-401 1.2 - Field mustardNo Capsella rubella v183 No Arabidopsis lyrata No Arabidopsis thaliana 10 - Thale cressNo Carica papaya No Medicago truncatula No Phaseolus vulgaris v186 - String beanNo Glycine max v109 - SoybeanNo Cucumis sativus v122 - CucumberNo Fragaria vesca No Malus domestica v196 - AppleNo Prunus persica v139 - PeachNo Linum usitatissimum v200 - FlaxNo Manihot esculenta v147 - CassavaNo Populus trichocarpa v156 - Black cottonwoodNo Vitis vinifera No Mimulus guttatus v140 - Spotted monkey flowerNo Solanum lycopersicum v.2.3 - TomatoNo Solanum tuberosum No Actinidia chinensis Hongyang No Aquilegia coerulea v195 No Triticum urartu 22 No Triticum aestivum 22 - Bread wheatNo Aegilops tauschii 22 No Brachypodium distachyon No Oryza barthii 22 - African wild riceNo Oryza meridionalis 22 No Oryza glumaepatula 22 No Oryza glaberrima - African riceNo Oryza punctata 22 No Oryza nivara 22 No Oryza brachyantha 22 - Malo sinaNo Oryza sativa ssp. japonica 5.0 - Japanese riceNo Oryza sativa v193 - RiceNo Phyllostachys heterocycla var. pubescens - MosochikuNo Panicum virgatum v202 - SwitchgrassNo Setaria italica v164 - Foxtail milletNo Zea mays subsp. mays No Zea mays v181 - MaizeNo Sorghum bicolor No Musa balbisiana - Balbis bananaNo Musa acuminata 22 - Wild Malaysian bananaNo Amborella trichopoda 22 No Physcomitrella patens No Coccomyxa subellipsoidea sp. C-169 v2 No Asterochloris sp. Cgr/DA1pho v1.0 No Chlorella variabilis sp. NC64A No Chlorella vulgaris No Volvox carteri f. nagariensis No Volvox carteri v199 No Chlamydomonas reinhardtii 4.0 No Ostreococcus sp. RCC809 No Ostreococcus lucimarinus CCE9901 No Ostreococcus tauri No Bathycoccus prasinos No Micromonas sp. RCC299 No Micromonas pusilla CCMP1545 v3.0 No Cyanidioschyzon merolae strain 10D 22 No Cyanidioschyzon merolae No Porphyridium purpureum 02_2012 No Thecamonas trahens ATCC 50062 No Bigelowiella natans CCMP2755 22 No Cyanophora paradoxa No Leishmania mexicana 2.4 No Leishmania major strain Friedlin No Leishmania infantum JPCM5 2.4 No Leishmania braziliensis MHOM/BR/75/M2904 2.4 No Trypanosoma vivax No Trypanosoma cruzi strain CL Brener No Trypanosoma congolense 2.4 No Trypanosoma brucei gambiense v4.1 No Trypanosoma brucei TREU927 v4.1 No Ectocarpus siliculosus No Aureococcus anophagefferens No Albugo laibachii 22 No Pythium iwayamai DAOM BR242034 22 No Pythium arrhenomanes ATCC 12531 22 No Pythium ultimum v1.7-2 No Pythium aphanidermatum DAOM BR444 22 No Pythium irregulare DAOM BR486 22 No Pythium vexans DAOM BR484 22 No Phytophthora ramorum 1.1 - Sudden oak death agentNo Phytophthora sojae 1.1 No Phytophthora infestans T30-4 No Phytophthora capsici No Hyaloperonospora arabidopsidis 22 No Phaeodactylum tricornutum CCAP 1055/1No Fragilariopsis cylindrus No Thalassiosira pseudonana CCMP1335No Perkinsus marinus ATCC 50983 No Paramecium tetraurelia No Tetrahymena thermophila SB210 1 No Ichthyophthirius multifiliis strain G5 No Cryptosporidium hominis No Cryptosporidium muris No Cryptosporidium parvum Iowa IINo Neospora caninum No Toxoplasma gondii VEGNo Toxoplasma gondii ME49No Toxoplasma gondii GT1No Babesia bovis T2Bo No Theileria parva No Theileria annulata No Plasmodium falciparum 3D7 No Plasmodium vivax SaI-1 7.0 No Plasmodium knowlesi strain H No Plasmodium yoelii ssp. yoelii 1 No Plasmodium chabaudi No Plasmodium berghei ANKA No Symbiodinium minutum clade B1 v1.2 No Naegleria gruberi No Trichomonas vaginalis No Guillardia theta CCMP2712 v1.0 No Emiliania huxleyi CCMP1516 No Rivularia sp. PCC 7116 No Conexibacter woesei DSM 14684No Ilumatobacter coccineus No Nakamurella multipartita DSM 44233No Acidothermus cellulolyticus 11BNo Frankia symbiont of Datisca glomerataNo Frankia alni ACN14aNo Thermomonospora curvata DSM 43183No Kitasatospora setae KM-6054No Streptomyces sp. PAMC26508 No Streptomyces flavogriseus ATCC 33331No Streptomyces scabiei 87.22No Amycolatopsis mediterranei U32No Kribbella flavida DSM 17836No Microlunatus phosphovorus NM-1No Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1No Salinispora arenicola CNS-205No Salinispora tropica CNB-440No Verrucosispora maris AB-18-032No Micromonospora sp. L5No Micromonospora aurantiaca ATCC 27029No Actinoplanes sp. N902-109 No Actinoplanes sp. SE50/110No Actinoplanes missouriensis 431No Gordonia sp. KTR9 No Gordonia polyisoprenivorans VH2No Gordonia bronchialis DSM 43247No Mycobacterium gilvum PYR-GCKNo Sanguibacter keddieii DSM 10542No Kytococcus sedentarius DSM 20547No Leifsonia xyli subsp. xyli str. CTCB07No Microbacterium testaceum StLB037No Xylanimonas cellulosilytica DSM 15894No Arthrobacter chlorophenolicus A6No Arthrobacter aurescens TC1No Arthrobacter arilaitensis Re117No Kocuria rhizophila DC2201No Arthrobacter sp. Rue61a No Arthrobacter sp. FB24No Micrococcus luteus NCTC 2665No Mobiluncus curtisii ATCC 43063No Actinomyces sp. F0330No Anaerolinea thermophila UNI-1No Roseiflexus sp. RS-1No Roseiflexus castenholzii DSM 13941No Chloroflexus sp. Y-400-flNo Chloroflexus aggregans DSM 9485No Chloroflexus aurantiacus J-10-flNo Deinococcus maricopensis DSM 21211No Deinococcus proteolyticus MRPNo Meiothermus ruber DSM 1279No Anaerococcus prevotii DSM 20548No Erysipelothrix rhusiopathiae str. FujisawaNo Clostridiales genomosp. BVAB3 str. UPII9-5No Clostridium clariflavum DSM 19732No Clostridium thermocellum ATCC 27405No Ethanoligenens harbinense YUAN-3No Oscillibacter valericigenes Sjm18-20No Candidatus Desulforudis audaxviator MP104CNo Thermincola potens JRNo Desulfosporosinus acidiphilus SJ4No Desulfosporosinus orientis DSM 765No Desulfotomaculum acetoxidans DSM 771No Desulfotomaculum kuznetsovii DSM 6115No Clostridium difficile 630No Clostridium phytofermentans ISDgNo Clostridium lentocellum DSM 5427No Roseburia intestinalis No Syntrophomonas wolfei subsp. wolfei str. GoettingenNo Clostridium sp. BNL1100No Clostridium ljungdahlii DSM 13528No Clostridium cellulovorans 743BNo Clostridium acetobutylicum ATCC 824No Caldicellulosiruptor kronotskyensis 2002No Caldicellulosiruptor lactoaceticus 6ANo Caldicellulosiruptor kristjanssonii 177R1BNo Caldicellulosiruptor saccharolyticus DSM 8903No Caldicellulosiruptor bescii DSM 6725No Thermoanaerobacterium thermosaccharolyticum DSM 571No Tetragenococcus halophilus NBRC 12172No Kyrpidia tusciae DSM 2912No Brevibacillus brevis NBRC 100599No Paenibacillus sp. JDR-2No Paenibacillus terrae HPL-003No Paenibacillus mucilaginosus 3016No Paenibacillus polymyxa M1No Bacillus selenitireducens MLS10No Solibacillus silvestris StLB046No Geobacillus thermoglucosidasius C56-YS93No butyrate-producing bacterium SSC/2 No Bacillus sp. 1NLA3E No Bacillus weihenstephanensis KBAB4No Bacillus thuringiensis str. Al HakamNo Bacillus cereus 03BB102No Bacillus anthracis str. A0248No Gemmatimonas aurantiaca T-27No Chloroherpeton thalassium ATCC 35110No Niastella koreensis GR20-10No Dyadobacter fermentans DSM 18053No Cytophaga hutchinsonii ATCC 33406No Fluviicola taffensis DSM 16823No Owenweeksia hongkongensis DSM 17368No Muricauda ruestringensis DSM 13258No Flavobacterium indicum GPTSA100-9No Flavobacterium psychrophilum JIP02/86No Flavobacterium branchiophilum FL-15No Flavobacterium johnsoniae UW101No Coraliomargarita akajimensis DSM 45221No Opitutus terrae PB90-1No Leptospira borgpetersenii serovar Hardjo-bovis str. L550No Leptospira interrogans serovar Lai str. IPAVNo Sphaerochaeta coccoides DSM 17374No Treponema azotonutricium ZAS-9No Treponema primitia ZAS-2No Treponema succinifaciens DSM 2489No Spirochaeta thermophila DSM 6192No Candidatus Saccharibacteria bacterium RAAC3_TM7_1 No Bdellovibrio bacteriovorus HD100No Arcobacter sp. LNo Helicobacter hepaticus ATCC 51449No Sulfurovum sp. NBC37-1No Desulfatibacillum alkenivorans AK-01No Geobacter sp. M21No Geobacter uraniireducens Rf4No Geobacter bemidjiensis BemNo Geobacter sulfurreducens KN400No Haliangium ochraceum DSM 14365No Sorangium cellulosum 'So ce 56'No Anaeromyxobacter sp. Fw109-5No Anaeromyxobacter dehalogenans 2CP-1No Stigmatella aurantiaca DW4/3-1No Corallococcus coralloides DSM 2259No Myxococcus xanthus DK 1622No Myxococcus fulvus HW-1No Dechloromonas aromatica RCBNo Candidatus Accumulibacter phosphatis clade IIA str. UW-1No Rubrivivax gelatinosus IL144No Burkholderia vietnamiensis G4No Delftia sp. Cs1-4No Delftia acidovorans SPH-1No Rhodoferax ferrireducens T118No Herminiimonas arsenicoxydans No Micavibrio aeruginosavorus ARL-13No Methylobacterium extorquens AM1No Sinorhizobium meliloti AK83No Saccharophagus degradans 2-40No Cellvibrio japonicus Ueda107No Vibrio fischeri MJ11No Psychromonas ingrahamii 37No Psychromonas sp. CNPT3 No Shewanella oneidensis MR-1No Shewanella baltica OS185No Shewanella sp. MR-4No Shewanella putrefaciens CN-32No Hahella chejuensis KCTC 2396No Alkalilimnicola ehrlichii MLHE-1No Thiocystis violascens DSM 198No Legionella pneumophila str. CorbyNo Photorhabdus asymbiotica No Photorhabdus luminescens subsp. laumondii TTO1No Xenorhabdus bovienii SS-2004No Citrobacter rodentium ICC168No Psychrobacter sp. G No Psychrobacter cryohalolentis K5No Francisella noatunensis subsp. orientalis str. Toba 04No Francisella sp. TX077308No Francisella philomiragia subsp. philomiragia ATCC 25017No Francisella tularensis subsp. tularensis WY96-3418No Francisella cf. novicida 3523No Francisella novicida U112No Methanocella arvoryzae MRE50No Methanocella conradii HZ254No Methanocella paludicola SANAENo Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frogNo Drosophila melanogaster FlyBase 5.12 - Fruit flyNo Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquitoNo Ascaris suum Victoria/Ghent No Caenorhabditis elegans WormBase WS218 - RoundwormNo Cryptococcus neoformans var. grubii H99 No Cryptococcus neoformans B-3501A No Cryptococcus neoformans JEC21 No Paracoccidioides brasiliensis Pb01 No Paracoccidioides brasiliensis Pb03 No Coccidioides posadasii str. Silveira No Coccidioides immitis RMSCC 3703 No Coccidioides immitis RMSCC 2394 No Coccidioides immitis H538.4 No Ajellomyces dermatitidis ER-3 No Histoplasma capsulatum H143No Histoplasma capsulatum H88No Histoplasma capsulatum G186ARNo Aspergillus fumigatus A1163 No Candida albicans WO-1 No Saccharomyces cerevisiae UC5No Saccharomyces cerevisiae PW5No Saccharomyces cerevisiae FL100No Saccharomyces cerevisiae CLIB382No Saccharomyces cerevisiae CLIB324No Saccharomyces cerevisiae CBS7960No Saccharomyces cerevisiae YJM269No Saccharomyces cerevisiae T7No Saccharomyces cerevisiae FostersBNo Saccharomyces cerevisiae FostersONo Saccharomyces cerevisiae VL3No Saccharomyces cerevisiae Vin13No Saccharomyces cerevisiae LalvinQA23No Saccharomyces cerevisiae AWRI796No Saccharomyces cerevisiae Sigma1278bNo Saccharomyces cerevisiae W303No Saccharomyces cerevisiae JAY291No Saccharomyces cerevisiae AWRI1631No Saccharomyces cerevisiae M22No Saccharomyces cerevisiae CLIB215No Saccharomyces cerevisiae Y10No Saccharomyces cerevisiae YJM789 No Saccharomyces cerevisiae YJM789No Saccharomyces cerevisiae RM11-1aNo Saccharomyces cerevisiae RM11-1a No Saccharomyces cerevisiae SGD - Baker's yeastNo Schizosaccharomyces pombe 972h- No Batrachochytrium dendrobatidis JEL423 No Batrachochytrium dendrobatidis JAM81 No Theobroma cacao Matina 1-6 v0.9 - CacaoNo Hordeum vulgare 22 - Domesticated barleyNo Oryza sativa ssp. Indica - Long-grained riceNo Trypanosoma brucei Lister 427 v4.1 No Neospora caninum Nc-Liverpool 6.2 No Plasmodium falciparum HB3 No Plasmodium falciparum Dd2 No Dactylococcopsis salina PCC 8305No Synechococcus sp. WH 8102No Prochlorococcus marinus str. NATL2ANo Frankia sp. EuI1cNo Streptomyces davawensis JCM 4913No Streptomyces venezuelae ATCC 10712No Saccharothrix espanaensis DSM 44229No Amycolatopsis mediterranei RBNo Amycolatopsis mediterranei S699No Amycolatopsis mediterranei S699No Amycolatopsis orientalis HCCB10007No Actinoplanes friuliensis DSM 7358No Mycobacterium gilvum Spyr1No Leifsonia xyli subsp. cynodontis DSM 46306No Bifidobacterium asteroides PRL2011No Actinomyces viscosus C505No Thermus oshimai JL-2No Thermus thermophilus JL-18No Thermus thermophilus HB8No Erysipelothrix rhusiopathiae SY1027No Clostridium thermocellum DSM 1313No Clostridium acidurici 9aNo Desulfosporosinus meridiei DSM 13257No Desulfitobacterium hafniense DCB-2No Clostridium difficile BI1No Clostridium difficile R20291No Clostridium difficile CD196No Roseburia intestinalis XB6B4No Clostridium botulinum A3 str. Loch MareeNo Clostridium acetobutylicum DSM 1731No Clostridium acetobutylicum EA 2018No Streptococcus salivarius JIM8777No Thermobacillus composti KWC4No Paenibacillus sp. Y412MC10No Paenibacillus mucilaginosus KNP414No Paenibacillus mucilaginosus K02No Paenibacillus polymyxa CR1No Paenibacillus polymyxa SC2No Paenibacillus polymyxa E681No Geobacillus sp. Y4.1MC1No Bacillus toyonensis BCT-7112No Bacillus thuringiensis HD-771No Bacillus thuringiensis HD-789No Bacillus thuringiensis MC28No Bacillus thuringiensis serovar chinensis CT-43No Bacillus thuringiensis YBT-1518No Bacillus thuringiensis Bt407No Bacillus thuringiensis serovar kurstaki str. HD73No Bacillus thuringiensis BMB171No Bacillus thuringiensis serovar finitimus YBT-020No Bacillus thuringiensis serovar thuringiensis str. IS5056No Bacillus cereus FRI-35No Bacillus cereus B4264No Bacillus cereus G9842No Bacillus cereus F837/76No Bacillus cereus ATCC 14579No Bacillus cereus ATCC 10987No Bacillus anthracis str. H9401No Bacillus anthracis str. CDC 684No Bacillus anthracis str. 'Ames Ancestor'No Bacillus anthracis str. SterneNo Bacillus anthracis str. AmesNo Leptospira borgpetersenii serovar Hardjo-bovis str. JB197No Leptospira interrogans serovar Lai str. 56601No Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130No Spirochaeta thermophila DSM 6578No Bdellovibrio bacteriovorus str. TiberiusNo Geobacter sp. M18No Geobacter sulfurreducens PCANo Sorangium cellulosum So0157-2No Anaeromyxobacter sp. KNo Myxococcus stipitatus DSM 14675No Magnetospirillum gryphiswaldense MSR-1 v2No Micavibrio aeruginosavorus EPBNo Vibrio fischeri ES114No Vibrio sp. EJY3No Vibrio nigripulchritudo VibrioScopeNo Shewanella sp. W3-18-1No Shewanella sp. ANA-3No Shewanella baltica BA175No Shewanella baltica OS678No Shewanella baltica OS117No Shewanella baltica OS223No Shewanella baltica OS195No Shewanella baltica OS155No Shewanella sp. MR-7No Shewanella putrefaciens 200No Coxiella burnetii CbuK_Q154No Coxiella burnetii RSA 331No Coxiella burnetii RSA 493No Legionella pneumophila str. ParisNo Legionella pneumophila str. LensNo Legionella pneumophila subsp. pneumophila LPE509No Legionella pneumophila subsp. pneumophila str. Thunder BayNo Legionella pneumophila subsp. pneumophila str. Philadelphia 1No Legionella pneumophila subsp. pneumophilaNo Legionella pneumophila subsp. pneumophilaNo Legionella pneumophila subsp. pneumophila ATCC 43290No Legionella pneumophila 2300/99 AlcoyNo Serratia marcescens FGI94No Enterobacter cloacae subsp. cloacae NCTC 9394No Pseudomonas fluorescens Pf0-1No Francisella tularensis subsp. mediasiatica FSC147No Francisella tularensis subsp. holarctica F92No Francisella tularensis subsp. holarctica FTNF002-00No Francisella tularensis subsp. holarctica OSU18No Francisella tularensis subsp. holarctica LVSNo Francisella tularensis subsp. holarctica FSC200No Francisella tularensis subsp. tularensis TIGB03No Francisella tularensis subsp. tularensis TI0902No Francisella tularensis subsp. tularensis NE061598No Francisella tularensis subsp. tularensis FSC198No Francisella tularensis subsp. tularensis SCHU S4No Francisella cf. novicida Fx1No Homo sapiens 69_37 - HumanNo Pan troglodytes 69_2.1.4 - ChimpanzeeNo Gorilla gorilla 69_3.1 - Western gorillaNo Pongo abelii 69_2 - Sumatran orangutanNo Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbonNo Macaca mulatta 69_1 - Rhesus monkeyNo Callithrix jacchus 69_3.2.1 - White-tufted-ear marmosetNo Otolemur garnettii 69_3 - Small-eared galagoNo Tarsius syrichta 69_1 No Microcebus murinus 69_1 - Gray mouse lemurNo Rattus norvegicus 69_3.4 - Norway ratNo Mus musculus 69_38 - House mouseNo Dipodomys ordii 69_1 - Ord's kangaroo ratNo Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrelNo Cavia porcellus 69_3 - Domestic guinea pigNo Oryctolagus cuniculus 69_2 - RabbitNo Ochotona princeps 69 - American pikaNo Tupaia belangeri 69 - Northern tree shrewNo Sus scrofa 69_10.2 - PigNo Bos taurus 69_3.1 - CattleNo Vicugna pacos 69_1 - AlpacaNo Tursiops truncatus 69_1 - Bottlenose dolphinNo Mustela putorius furo 69_1.0 - Domestic ferretNo Ailuropoda melanoleuca 69_1 - Giant pandaNo Canis familiaris 69_3.1 - DogNo Felis catus 69 - Domestic catNo Equus caballus 69_2 - HorseNo Myotis lucifugus 69_2.0 - Little brown batNo Pteropus vampyrus 69_1 - Large flying foxNo Sorex araneus 69_1 - European shrewNo Erinaceus europaeus 69 - Western European hedgehogNo Procavia capensis 69_1 - Cape rock hyraxNo Loxodonta africana 69_3 - African savanna elephantNo Echinops telfairi 69 - Small Madagascar hedgehogNo Dasypus novemcinctus 69_2 - Nine-banded armadilloNo Choloepus hoffmanni 69_1 - Hoffmann's two-fingered slothNo Macropus eugenii 69_1.0 - Tammar wallabyNo Sarcophilus harrisii 69_7.0 - Tasmanian devilNo Monodelphis domestica 69_5 - Gray short-tailed opossumNo Ornithorhynchus anatinus 69_5 - PlatypusNo Petromyzon marinus 69_7.0 - Sea lampreyNo Meleagris gallopavo 69_2 - TurkeyNo Gallus gallus 69_2 - ChickenNo Taeniopygia guttata 69_3.2.4 - Zebra finchNo Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtleNo Anolis carolinensis 69_2.0 - Green anoleNo Xenopus tropicalis 69_4.2 - Tropical clawed frogNo Latimeria chalumnae 69_1 - CoelacanthNo Gadus morhua 69_1 - Atlantic codNo Tetraodon nigroviridis 69_8 - Spotted green pufferfishNo Takifugu rubripes 69_4 - TorafuguNo Gasterosteus aculeatus 69_1 - Three-spined sticklebackNo Oryzias latipes 69_1 - Japanese medakaNo Xiphophorus maculatus 69_4.4.2 - Southern platyfishNo Oreochromis niloticus 69_1.0 - Nile tilapiaNo Danio rerio 69_9 - ZebrafishNo Ciona savignyi 69_2.0 - Pacific transparent sea squirtNo Ciona intestinalis 69 - Vase tunicateNo Drosophila melanogaster 69_5 - Fruit flyNo Caenorhabditis elegans 69_215 - RoundwormNo Saccharomyces cerevisiae 69_4 - Baker's yeastNo Arabidopsis thaliana 10 - Thale cressNo Homo sapiens 75_37 - HumanNo Homo sapiens No Mus musculus 63_37 (longest transcript per gene) - House mouseNo Heliconius numata No Loa loa v3.3 - Eye wormNo Wuchereria bancrofti v1.0 - Agent of lymphatic filariasisNo Brugia malayi v1.0 - Agent of lymphatic filariasisNo Moniliophthora perniciosa FA553 No Encephalitozoon intestinalis No Encephalitozoon cuniculi No Lotus japonicus No Malus x domestica - AppleNo Ricinus communis No Nicotiana benthamiana 0.4.4 No Solanum pimpinellifolium A-1.0 - Currant tomatoNo Solanum lycopersicum v2.3 - TomatoNo Phoenix dactylifera No 1_050719N (meta-genome)No 1_Upper_euphotic (meta-genome)No 2_050719S (meta-genome)No 2_Base_of_chrolophyll_max (meta-genome)No 3_050719R (meta-genome)No 3_Below_base_of_euphotic (meta-genome)No 4_050719Q (meta-genome)No 4_Deep_abyss (meta-genome)No 5_050719P (meta-genome)No 5_Below_upper_mesopelagic (meta-genome)No 6_Upper_euphotic (meta-genome)No 7_Oxygen_minimum_layer (meta-genome)No Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)No Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)No Atta cephalotes fungus garden (ACEF) (meta-genome)No Bath Hot Springs, planktonic community (meta-genome)No Combined (meta-genome)No Cyphomyrmex longiscapus fungus garden (meta-genome)No Dump bottom (Dump bottom) (meta-genome)No Dump top (Dump top) (meta-genome)No Endophytic microbiome from Rice (meta-genome)No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)No Freshwater propionate enrichment of Brocadia fulgida (meta-genome)No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes No Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)No Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)No Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)No Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)No Human Gut Community Subject 7 (meta-genome)No Human Gut Community Subject 8 (meta-genome)No Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)No Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) No Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)No Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) No Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) No Mouse Gut Community lean2 (meta-genome)No Mouse Gut Community ob1 (meta-genome)No NCBI 2017_08 genome No Nymph Lake Bulk Water (meta-genome)No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)No Protozoadb 2010_08 (Protozoadb)No simHC - Simulated High Complexity Metagenome (meta-genome)No simLC - Simulated Low Complexity Metagenome (meta-genome)No simMC - Simulated Medium Complexity Metagenome (meta-genome)No Single-cell genome from subgingival tooth surface TM7a (meta-genome)No Single-cell genome from subgingival tooth surface TM7c (meta-genome)No Sludge/Australian, Phrap Assembly (meta-genome)No Sludge/US, Jazz Assembly (meta-genome)No Sludge/US, Phrap Assembly (meta-genome)No Soil microbial communities from Minnesota Farm (meta-genome)No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)No Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)No STRING v9.0.5 (STRING)No Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)No Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) No Termite Protist Endosymbiont Community (meta-genome)No Uniprot 2018_03 genome No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)No Global Ocean Sampling Expedition (GOS) No NCBI plasmid sequences (Plasmids) No NCBI viral sequences (Viral) No PDB chains (SCOP 1.75 ) (PDB) No Protein Data Bank (all PDB sequenc) No SCOP2 SCOPe CATH ECOD (all domain sequ) No TargetDB No UniProt ALL (only advised for small superfamilies)
