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Home > SCOP hierarchy > Rad50 coiled-coil Zn hook > Alignments for region 51-126 from Cucsa.237020.1|PACid:16970528

Rad50 coiled-coil Zn hook alignments

These alignments are sequences aligned to the 0053474 model.

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The numbers along the top are the segment numbers of the HMM states, and each sequence is seperately aligned to the model.
The first sequence is the seed the model was built from.
Upper case letters are aligned, lower case letters are insertions, '-' signifies a deletion and '.' is nothing.

                                              10        20        30        40        50        60  
                                               |         |         |         |         |         |  
d1l8db_                              m-KKLLEELETKKTTIEEERNEITQRIGELKNKIGDLKTAIEELKKAKGKCPVCGRELTDEHR
Cucsa.237020.1|PACid:16970528:51-126 r---------RKVEKLENSEEDIMHEVEEQSLEVLSKQQLCSHPGSFGNMCIICGQRLDEES-


                                           70        80        90       100                         
                                            |         |         |         |                         
d1l8db_                              EELLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEI-k......................
Cucsa.237020.1|PACid:16970528:51-126 ----------------------------------------gvtfgyihkelrlnndeinrmrn


Statistics on alignment.	Save alignment.

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Members of the same:	including
Include all superfamily members:	, or just those assigned by the selected model:
Initial T99 seed sequence:	NoYes

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Model: 0053474 (list models)

Initial SAMT99 seed:
Alignment:

Display Options:

Output in FASTA-like format:	NoYes
Output column indices:	NoYes
Sequence index (number) on each line:	NoYes

Max number of insertions shown:	(0 does not show insertions)
Characters per line:
Character to show inserts:
Maximum number of sequences:
Exclude sequences shorter than:	residues

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Add alignments from genomes

Select below additional genomes you would like to see alignments for, then click on 'Re-Submit'. The genome assignments will be added to this page.

Select to display	Genome
NoYes	Homo sapiens 76_38 - Human
NoYes	Pan troglodytes 76_2.1.4 - Chimpanzee
NoYes	Gorilla gorilla 76_3.1 - Western gorilla
NoYes	Pongo abelii 76_2 - Sumatran orangutan
NoYes	Papio anubis 76 - Olive baboon
NoYes	Macaca mulatta 76_1 - Rhesus monkey
NoYes	Callithrix jacchus 76_3.2.1 - White-tufted-ear marmoset
NoYes	Otolemur garnettii 76_3 - Small-eared galago
NoYes	Rattus norvegicus 76_5.0 - Norway rat
NoYes	Mus musculus 76_38 - House mouse
NoYes	Dipodomys ordii 76_1 - Ord's kangaroo rat
NoYes	Ochotona princeps 76 - American pika
NoYes	Tupaia belangeri 76 - Northern tree shrew
NoYes	Bos taurus 76_3.1 - Cattle
NoYes	Ovis aries 76_3.1 - Sheep
NoYes	Vicugna pacos 76_1 - Alpaca
NoYes	Tursiops truncatus 76_1 - Bottlenose dolphin
NoYes	Mustela putorius furo 76_1.0 - Domestic ferret
NoYes	Ailuropoda melanoleuca 76_1 - Giant panda
NoYes	Canis familiaris 76_3.1 - Dog
NoYes	Felis catus 76_6.2 - Domestic cat
NoYes	Equus caballus 76_2 - Horse
NoYes	Myotis lucifugus 76_2.0 - Little brown bat
NoYes	Sorex araneus 76_1 - European shrew
NoYes	Erinaceus europaeus 76 - Western European hedgehog
NoYes	Procavia capensis 76_1 - Cape rock hyrax
NoYes	Loxodonta africana 76_3 - African savanna elephant
NoYes	Saccoglossus kowalevskii v3.0
NoYes	Meleagris gallopavo 76_2 - Turkey
NoYes	Gallus gallus 76_4 - Chicken
NoYes	Anas platyrhynchos 76_1.0 - Mallard
NoYes	Taeniopygia guttata 76_3.2.4 - Zebra finch
NoYes	Ficedula albicollis 76_1.0 - Collared flycatcher
NoYes	Anolis carolinensis 76_2.0 - Green anole
NoYes	Gadus morhua 76_1 - Atlantic cod
NoYes	Tetraodon nigroviridis 76_8 - Spotted green pufferfish
NoYes	Takifugu rubripes 76_4 - Torafugu
NoYes	Gasterosteus aculeatus 76_1 - Three-spined stickleback
NoYes	Oryzias latipes 76_1 - Japanese medaka
NoYes	Xiphophorus maculatus 76_4.4.2 - Southern platyfish
NoYes	Poecilia formosa 76 - Amazon molly
NoYes	Oreochromis niloticus 76_1.0 - Nile tilapia
NoYes	Strongylocentrotus purpuratus v3.1 - Purple sea urchin
NoYes	Adineta vaga
NoYes	Octopus bimaculoides 280
NoYes	Lottia gigantea - Owl limpet
NoYes	Danaus plexippus OGS1.0 - Monarch butterfly
NoYes	Harpegnathos saltator v3.3 - Jerdon's jumping ant
NoYes	Drosophila grimshawi 1.3
NoYes	Drosophila willistoni 1.3
NoYes	Drosophila pseudoobscura 2.13
NoYes	Drosophila persimilis 1.3
NoYes	Drosophila suzukii
NoYes	Drosophila yakuba 1.3
NoYes	Drosophila simulans 1.3
NoYes	Drosophila sechellia 1.3
NoYes	Drosophila melanogaster 76_5 - Fruit fly
NoYes	Drosophila erecta 1.3
NoYes	Drosophila ananassae 1.3
NoYes	Drosophila virilis 1.2
NoYes	Drosophila mojavensis 1.3
NoYes	Aedes aegypti 55 - Yellow fever mosquito
NoYes	Culex pipiens quinquefasciatus - Southern house mosquito
NoYes	Anopheles darlingi 22 - American malaria mosquito
NoYes	Anopheles gambiae 49_3j - African malaria mosquito
NoYes	Tribolium castaneum 3.0 - Red flour beetle
NoYes	Pediculus humanus corporis - Human body louse
NoYes	Acyrthosiphon pisum - Pea aphid
NoYes	Rhodnius prolixus 22
NoYes	Daphnia pulex - Common water flea
NoYes	Ixodes scapularis - Black-legged tick
NoYes	Pristionchus pacificus
NoYes	Caenorhabditis japonica
NoYes	Caenorhabditis brenneri
NoYes	Caenorhabditis elegans 76_235 - Roundworm
NoYes	Caenorhabditis briggsae 2
NoYes	Schistosoma mansoni
NoYes	Proterospongia sp. ATCC 50818
NoYes	Phycomyces blakesleeanus
NoYes	Rhizopus oryzae RA 99-880
NoYes	Thielavia terrestris NRRL 8126
NoYes	Botrytis cinerea B05.10
NoYes	Cochliobolus victoriae FI3 v1.0
NoYes	Cochliobolus carbonum 26-R-13 v1.0
NoYes	Dictyostelium discoideum
NoYes	Volvox carteri f. nagariensis
NoYes	Volvox carteri v199
NoYes	Chlamydomonas reinhardtii 4.0
NoYes	Micromonas sp. RCC299
NoYes	Phytophthora infestans T30-4
NoYes	Plasmodium knowlesi strain H
NoYes	Plasmodium yoelii ssp. yoelii 1
NoYes	Plasmodium chabaudi
NoYes	Trichomonas vaginalis
NoYes	Guillardia theta CCMP2712 v1.0
NoYes	Acholeplasma laidlawii PG-8A
NoYes	Leptolyngbya sp. PCC 7376
NoYes	Pseudanabaena sp. PCC 7367
NoYes	Acaryochloris marina MBIC11017
NoYes	Synechocystis sp. PCC 6803
NoYes	Thermosynechococcus sp. NK55
NoYes	Thermosynechococcus elongatus BP-1
NoYes	Synechococcus sp. PCC 7502
NoYes	Synechococcus sp. PCC 6312
NoYes	Synechococcus elongatus PCC 7942
NoYes	Microcoleus sp. PCC 7113
NoYes	Trichodesmium erythraeum IMS101
NoYes	Geitlerinema sp. PCC 7407
NoYes	Cyanothece sp. PCC 8802
NoYes	Gloeocapsa sp. PCC 7428
NoYes	cyanobacterium UCYN-A
NoYes	Halothece sp. PCC 7418
NoYes	Microcystis aeruginosa NIES-843
NoYes	Gloeobacter violaceus PCC 7421
NoYes	Rivularia sp. PCC 7116
NoYes	Calothrix sp. PCC 7507
NoYes	Anabaena variabilis ATCC 29413
NoYes	'Nostoc azollae' 0708
NoYes	Nostoc sp. PCC 7107
NoYes	Nostoc punctiforme PCC 73102
NoYes	Nostoc sp. PCC 7120
NoYes	Nostoc sp. PCC 7524
NoYes	Anabaena sp. 90
NoYes	Kineococcus radiotolerans SRS30216
NoYes	Caldilinea aerophila DSM 14535 = NBRC 104270
NoYes	Dehalococcoides ethenogenes 195
NoYes	Dehalococcoides sp. BAV1
NoYes	Dehalogenimonas lykanthroporepellens BL-DC-9
NoYes	Anaerolinea thermophila UNI-1
NoYes	Sphaerobacter thermophilus DSM 20745
NoYes	Herpetosiphon aurantiacus DSM 785
NoYes	Roseiflexus sp. RS-1
NoYes	Roseiflexus castenholzii DSM 13941
NoYes	Chloroflexus sp. MS-G
NoYes	Chloroflexus sp. Y-400-fl
NoYes	Chloroflexus aggregans DSM 9485
NoYes	Chloroflexus aurantiacus J-10-fl
NoYes	Thermus sp. CCB_US3_UF1
NoYes	Acidaminococcus intestini RyC-MR95
NoYes	Clostridium clariflavum DSM 19732
NoYes	Clostridium cellulolyticum H10
NoYes	Clostridium thermocellum ATCC 27405
NoYes	Clostridium sticklandii DSM 519
NoYes	Filifactor alocis ATCC 35896
NoYes	Roseburia hominis A2-183
NoYes	Clostridium ljungdahlii DSM 13528
NoYes	Mahella australiensis 50-1 BON
NoYes	Caldicellulosiruptor obsidiansis OB47
NoYes	Caldicellulosiruptor kronotskyensis 2002
NoYes	Caldicellulosiruptor hydrothermalis 108
NoYes	Caldicellulosiruptor owensensis OL
NoYes	Caldicellulosiruptor lactoaceticus 6A
NoYes	Caldicellulosiruptor kristjanssonii 177R1B
NoYes	Caldicellulosiruptor saccharolyticus DSM 8903
NoYes	Caldicellulosiruptor bescii DSM 6725
NoYes	Thermoanaerobacterium xylanolyticum LX-11
NoYes	Thermoanaerobacterium thermosaccharolyticum DSM 571
NoYes	Coprothermobacter proteolyticus DSM 5265
NoYes	Carboxydothermus hydrogenoformans Z-2901
NoYes	Ammonifex degensii KC4
NoYes	Enterococcus sp. 7L76
NoYes	Streptococcus pasteurianus ATCC 43144
NoYes	Geobacillus thermodenitrificans NG80-2
NoYes	Bacillus pseudofirmus OF4
NoYes	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
NoYes	Staphylococcus lugdunensis HKU09-01
NoYes	Staphylococcus epidermidis RP62A
NoYes	Staphylococcus carnosus subsp. carnosus TM300
NoYes	Staphylococcus aureus subsp. aureus JH1
NoYes	Staphylococcus aureus
NoYes	Gemmatimonas aurantiaca T-27
NoYes	Ignavibacterium album JCM 16511
NoYes	Chloroherpeton thalassium ATCC 35110
NoYes	Salinibacter ruber M8
NoYes	Rhodothermus marinus DSM 4252
NoYes	Alistipes finegoldii DSM 17242
NoYes	Bacteroides helcogenes P 36-108
NoYes	Deferribacter desulfuricans SSM1
NoYes	Fervidobacterium nodosum Rt17-B1
NoYes	Thermotoga lettingae TMO
NoYes	Thermotoga neapolitana DSM 4359
NoYes	Thermovibrio ammonificans HB-1
NoYes	Desulfurobacterium thermolithotrophum DSM 11699
NoYes	Sulfurihydrogenibium sp. YO3AOP1
NoYes	Sulfurihydrogenibium azorense Az-Fu1
NoYes	Persephonella marina EX-H1
NoYes	Thermocrinis albus DSM 14484
NoYes	Hydrogenobacter thermophilus TK-6
NoYes	Caldisericum exile AZM16c01
NoYes	Thermodesulfovibrio yellowstonii DSM 11347
NoYes	Arcobacter sp. L
NoYes	Arcobacter nitrofigilis DSM 7299
NoYes	Sulfuricurvum kujiense DSM 16994
NoYes	Sulfurovum sp. NBC37-1
NoYes	Desulfobacca acetoxidans DSM 11109
NoYes	Geobacter lovleyi SZ
NoYes	Babela massiliensis
NoYes	Legionella longbeachae NSW150
NoYes	Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)
NoYes	Nanoarchaeum equitans Kin4-M
NoYes	Nitrosopumilus maritimus SCM1
NoYes	Candidatus Korarchaeum cryptofilum OPF8
NoYes	Acidilobus saccharovorans 345-15
NoYes	Fervidicoccus fontis Kam940
NoYes	Pyrolobus fumarii 1A
NoYes	Hyperthermus butylicus DSM 5456
NoYes	Thermogladius cellulolyticus 1633
NoYes	Ignisphaera aggregans DSM 17230
NoYes	Aeropyrum pernix K1
NoYes	Ignicoccus hospitalis KIN4/I
NoYes	Thermosphaera aggregans DSM 11486
NoYes	Staphylothermus hellenicus DSM 12710
NoYes	Staphylothermus marinus F1
NoYes	Desulfurococcus fermentans DSM 16532
NoYes	Desulfurococcus kamchatkensis 1221n
NoYes	Desulfurococcus mucosus DSM 2162
NoYes	Metallosphaera cuprina Ar-4
NoYes	Metallosphaera sedula DSM 5348
NoYes	Acidianus hospitalis W1
NoYes	Sulfolobus tokodaii str. 7
NoYes	Sulfolobus solfataricus P2
NoYes	Sulfolobus acidocaldarius DSM 639
NoYes	Thermofilum sp. 1910b
NoYes	Vulcanisaeta moutnovskia 768-28
NoYes	Vulcanisaeta distributa DSM 14429
NoYes	Caldivirga maquilingensis IC-167
NoYes	Pyrobaculum sp. 1860
NoYes	Pyrobaculum calidifontis JCM 11548
NoYes	Pyrobaculum arsenaticum DSM 13514
NoYes	Pyrobaculum oguniense TE7
NoYes	Thermoproteus neutrophilus V24Sta
NoYes	Pyrobaculum aerophilum str. IM2
NoYes	Pyrobaculum islandicum DSM 4184
NoYes	Thermoproteus uzoniensis 768-20
NoYes	Thermoproteus tenax Kra 1
NoYes	halophilic archaeon DL31
NoYes	Methanosaeta thermophila PT
NoYes	Methanosaeta concilii GP6
NoYes	Methanosalsum zhilinae DSM 4017
NoYes	Methanohalobium evestigatum Z-7303
NoYes	Methanococcoides burtonii DSM 6242
NoYes	Methanosarcina acetivorans C2A
NoYes	Methanosarcina barkeri str. Fusaro
NoYes	Methanohalophilus mahii DSM 5219
NoYes	Methanosphaerula palustris E1-9c
NoYes	Methanoregula boonei 6A8
NoYes	Methanoplanus petrolearius DSM 11571
NoYes	Methanoculleus bourgensis MS2
NoYes	Methanoculleus marisnigri JR1
NoYes	Methanopyrus kandleri AV19
NoYes	Archaeoglobus profundus DSM 5631
NoYes	Archaeoglobus fulgidus DSM 4304
NoYes	Thermococcus sp. 4557
NoYes	Thermococcus onnurineus NA1
NoYes	Thermococcus kodakarensis KOD1
NoYes	Thermococcus gammatolerans EJ3
NoYes	Thermococcus sibiricus MM 739
NoYes	Thermococcus barophilus MP
NoYes	Pyrococcus sp. ST04
NoYes	Pyrococcus yayanosii CH1
NoYes	Pyrococcus horikoshii OT3
NoYes	Pyrococcus abyssi GE5
NoYes	Pyrococcus furiosus COM1
NoYes	Thermoplasma volcanium GSS1
NoYes	Thermoplasma acidophilum DSM 1728
NoYes	Picrophilus torridus DSM 9790
NoYes	Salinarchaeum sp. Harcht-Bsk1
NoYes	Halopiger xanaduensis SH-6
NoYes	Methanobacterium sp. AL-21
NoYes	Haloterrigena turkmenica DSM 5511
NoYes	Natrinema sp. J7-2
NoYes	Natrialba magadii ATCC 43099
NoYes	Halorubrum lacusprofundi ATCC 49239
NoYes	Haloquadratum walsbyi DSM 16790
NoYes	Halogeometricum borinquense DSM 11551
NoYes	Haloferax mediterranei ATCC 33500
NoYes	Haloferax volcanii DS2
NoYes	Halomicrobium mukohataei DSM 12286
NoYes	Halorhabdus utahensis DSM 12940
NoYes	Natronomonas pharaonis DSM 2160
NoYes	Haloarcula hispanica ATCC 33960
NoYes	Haloarcula marismortui ATCC 43049
NoYes	Halalkalicoccus jeotgali B3
NoYes	Halobacterium salinarum R1
NoYes	Halobacterium sp. NRC-1
NoYes	Methanotorris igneus Kol 5
NoYes	Methanocaldococcus sp. FS406-22
NoYes	Methanocaldococcus fervens AG86
NoYes	Methanocaldococcus vulcanius M7
NoYes	methanocaldococcus infernus ME
NoYes	Methanocaldococcus jannaschii DSM 2661
NoYes	Methanothermococcus okinawensis IH1
NoYes	Methanococcus aeolicus Nankai-3
NoYes	Methanococcus maripaludis C5
NoYes	Methanococcus voltae A3
NoYes	Methanococcus vannielii SB
NoYes	Methanothermus fervidus DSM 2088
NoYes	Methanothermobacter marburgensis str. Marburg
NoYes	Methanothermobacter thermautotrophicus str. Delta H
NoYes	Methanosphaera stadtmanae DSM 3091
NoYes	Methanobrevibacter sp. AbM4
NoYes	Methanobrevibacter ruminantium M1
NoYes	Methanobrevibacter smithii ATCC 35061
NoYes	Complete genome sequence of Methanobacterium sp. Mb1
NoYes	Aciduliprofundum sp. MAR08-339
NoYes	Aciduliprofundum boonei T469
NoYes	Drosophila melanogaster FlyBase 5.12 - Fruit fly
NoYes	Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquito
NoYes	Caenorhabditis elegans WormBase WS218 - Roundworm
NoYes	Chroococcidiopsis thermalis PCC 7203
NoYes	Chamaesiphon minutus PCC 6605
NoYes	Synechocystis sp. PCC 6803 substr. PCC-P
NoYes	Synechocystis sp. PCC 6803 substr. PCC-N
NoYes	Synechocystis sp. PCC 6803 substr. GT-I
NoYes	Synechocystis sp. PCC 6803
NoYes	Dactylococcopsis salina PCC 8305
NoYes	Synechococcus sp. JA-2-3B'a(2-13)
NoYes	Synechococcus sp. JA-3-3Ab
NoYes	Synechococcus sp. PCC 7002
NoYes	Synechococcus elongatus PCC 6301
NoYes	Crinalium epipsammum PCC 9333
NoYes	Oscillatoria nigro-viridis PCC 7112
NoYes	Oscillatoria acuminata PCC 6304
NoYes	Arthrospira platensis NIES-39
NoYes	Cyanothece sp. PCC 7822
NoYes	Cyanothece sp. PCC 7425
NoYes	Cyanothece sp. PCC 7424
NoYes	Cyanothece sp. ATCC 51142
NoYes	Cyanothece sp. PCC 8801
NoYes	Cyanobacterium aponinum PCC 10605
NoYes	Cyanobacterium stanieri PCC 7202
NoYes	Gloeobacter kilaueensis Gloeobacter sp. JS
NoYes	Pleurocapsa minor Pleurocapsa sp. PCC 7327
NoYes	Stanieria cyanosphaera PCC 7437
NoYes	Calothrix parietina Calothrix sp. PCC 6303
NoYes	Cylindrospermum stagnale PCC 7417
NoYes	Anabaena cylindrica PCC 7122
NoYes	Actinomyces graevenitzii C83
NoYes	Dehalococcoides mccartyi GY50
NoYes	Dehalococcoides mccartyi DCMB5
NoYes	Dehalococcoides mccartyi BTF08
NoYes	Dehalococcoides sp. GT
NoYes	Dehalococcoides sp. VS
NoYes	Dehalococcoides sp. CBDB1
NoYes	Chthonomonas calidirosea T49
NoYes	Clostridium thermocellum DSM 1313
NoYes	Ruminococcus champanellensis 18P13
NoYes	Desulfosporosinus meridiei DSM 13257
NoYes	Desulfotomaculum gibsoniae DSM 7213
NoYes	Coprococcus catus GD/7
NoYes	Clostridium saccharobutylicum DSM 13864
NoYes	Clostridium pasteurianum BC1
NoYes	Clostridium botulinum BKT015925
NoYes	Thermoanaerobacterium saccharolyticum JW/SL-YS485
NoYes	Thermoanaerobacterium thermosaccharolyticum M0795
NoYes	Thermacetogenium phaeum DSM 12270
NoYes	Lactococcus lactis subsp. lactis IO-1
NoYes	Streptococcus agalactiae ILRI112
NoYes	Thermobacillus composti KWC4
NoYes	Listeria monocytogenes serotype 1/2b str. SLCC2755
NoYes	Staphylococcus aureus subsp. aureus MSHR1132
NoYes	Staphylococcus pasteuri SP1
NoYes	Staphylococcus lugdunensis N920143
NoYes	Staphylococcus epidermidis ATCC 12228
NoYes	Staphylococcus aureus CA-347
NoYes	Staphylococcus aureus Bmb9393
NoYes	Staphylococcus aureus M1
NoYes	Staphylococcus aureus 08BA02176
NoYes	Staphylococcus aureus ST228/18412
NoYes	Staphylococcus aureus ST228/18341
NoYes	Staphylococcus aureus ST228/16125
NoYes	Staphylococcus aureus ST228/16035
NoYes	Staphylococcus aureus ST228/15532
NoYes	Staphylococcus aureus ST228/10497
NoYes	Staphylococcus aureus ST228/10388
NoYes	Staphylococcus aureus subsp. aureus Z172
NoYes	Staphylococcus aureus subsp. aureus 6850
NoYes	Staphylococcus aureus subsp. aureus CN1
NoYes	Staphylococcus aureus subsp. aureus 11819-97
NoYes	Staphylococcus aureus subsp. aureus HO 5096 0412
NoYes	Staphylococcus aureus subsp. aureus VC40
NoYes	Staphylococcus aureus subsp. aureus T0131
NoYes	Staphylococcus aureus subsp. aureus ECT-R 2
NoYes	Staphylococcus aureus subsp. aureus JKD6159
NoYes	Staphylococcus aureus subsp. aureus TW20
NoYes	Staphylococcus aureus subsp. aureus 55/2053
NoYes	Staphylococcus aureus subsp. aureus TCH60
NoYes	Staphylococcus aureus subsp. aureus str. JKD6008
NoYes	Staphylococcus aureus subsp. aureus 71193
NoYes	Staphylococcus aureus subsp. aureus S0385
NoYes	Staphylococcus aureus subsp. aureus str. Newman
NoYes	Staphylococcus aureus subsp. aureus Mu3
NoYes	Staphylococcus aureus subsp. aureus USA300_TCH1516
NoYes	Staphylococcus aureus subsp. aureus USA300_FPR3757
NoYes	Staphylococcus aureus subsp. aureus JH9
NoYes	Staphylococcus aureus subsp. aureus MSSA476
NoYes	Staphylococcus aureus subsp. aureus MRSA252
NoYes	Staphylococcus aureus subsp. aureus MW2
NoYes	Staphylococcus aureus subsp. aureus N315
NoYes	Staphylococcus aureus subsp. aureus Mu50
NoYes	Staphylococcus aureus subsp. aureus COL
NoYes	Salinibacter ruber DSM 13855
NoYes	Rhodothermus marinus SG0.5JP17-172
NoYes	Hydrogenobacter thermophilus TK-6
NoYes	Variovorax paradoxus B4
NoYes	Shewanella baltica OS223
NoYes	Escherichia coli O104:H4 str. 2009EL-2050
NoYes	Pseudomonas putida DOT-T1E
NoYes	Candidatus Nitrososphaera gargensis Ga9.2
NoYes	Caldisphaera lagunensis DSM 15908
NoYes	Aeropyrum camini SY1 = JCM 12091
NoYes	Sulfolobus islandicus LAL14/1
NoYes	Sulfolobus islandicus REY15A
NoYes	Sulfolobus islandicus HVE10/4
NoYes	Sulfolobus islandicus Y.G.57.14
NoYes	Sulfolobus islandicus L.S.2.15
NoYes	Sulfolobus islandicus M.16.27
NoYes	Sulfolobus islandicus M.14.25
NoYes	Sulfolobus islandicus M.16.4
NoYes	Sulfolobus islandicus L.D.8.5
NoYes	Sulfolobus solfataricus 98/2
NoYes	Sulfolobus acidocaldarius SUSAZ
NoYes	Sulfolobus acidocaldarius Ron12/I
NoYes	Sulfolobus acidocaldarius N8
NoYes	Methanomethylovorans hollandica DSM 15978
NoYes	Methanolobus psychrophilus R15
NoYes	Thermococcus sp. AM4
NoYes	Thermococcus sp. CL1
NoYes	Thermococcus litoralis DSM 5473
NoYes	Pyrococcus sp. NA2
NoYes	Pyrococcus furiosus DSM 3638
NoYes	Ferroplasma acidarmanus fer1
NoYes	Halovivax ruber XH-70
NoYes	Natrinema pellirubrum DSM 15624
NoYes	Natronococcus occultus SP4
NoYes	Natronobacterium gregoryi SP2
NoYes	Haloquadratum walsbyi C23
NoYes	Halorhabdus tiamatea SARL4B
NoYes	Natronomonas moolapensis 8.8.11
NoYes	Haloarcula hispanica N601
NoYes	Methanococcus maripaludis X1
NoYes	Methanococcus maripaludis C6
NoYes	Methanococcus maripaludis C7
NoYes	Methanococcus maripaludis S2
NoYes	Methanobacterium sp. SWAN-1
NoYes	Homo sapiens 69_37 - Human
NoYes	Pan troglodytes 69_2.1.4 - Chimpanzee
NoYes	Gorilla gorilla 69_3.1 - Western gorilla
NoYes	Pongo abelii 69_2 - Sumatran orangutan
NoYes	Macaca mulatta 69_1 - Rhesus monkey
NoYes	Callithrix jacchus 69_3.2.1 - White-tufted-ear marmoset
NoYes	Otolemur garnettii 69_3 - Small-eared galago
NoYes	Rattus norvegicus 69_3.4 - Norway rat
NoYes	Mus musculus 69_38 - House mouse
NoYes	Dipodomys ordii 69_1 - Ord's kangaroo rat
NoYes	Ochotona princeps 69 - American pika
NoYes	Tupaia belangeri 69 - Northern tree shrew
NoYes	Bos taurus 69_3.1 - Cattle
NoYes	Vicugna pacos 69_1 - Alpaca
NoYes	Tursiops truncatus 69_1 - Bottlenose dolphin
NoYes	Mustela putorius furo 69_1.0 - Domestic ferret
NoYes	Ailuropoda melanoleuca 69_1 - Giant panda
NoYes	Canis familiaris 69_3.1 - Dog
NoYes	Equus caballus 69_2 - Horse
NoYes	Myotis lucifugus 69_2.0 - Little brown bat
NoYes	Sorex araneus 69_1 - European shrew
NoYes	Erinaceus europaeus 69 - Western European hedgehog
NoYes	Procavia capensis 69_1 - Cape rock hyrax
NoYes	Loxodonta africana 69_3 - African savanna elephant
NoYes	Meleagris gallopavo 69_2 - Turkey
NoYes	Gallus gallus 69_2 - Chicken
NoYes	Taeniopygia guttata 69_3.2.4 - Zebra finch
NoYes	Anolis carolinensis 69_2.0 - Green anole
NoYes	Gadus morhua 69_1 - Atlantic cod
NoYes	Tetraodon nigroviridis 69_8 - Spotted green pufferfish
NoYes	Takifugu rubripes 69_4 - Torafugu
NoYes	Gasterosteus aculeatus 69_1 - Three-spined stickleback
NoYes	Oryzias latipes 69_1 - Japanese medaka
NoYes	Xiphophorus maculatus 69_4.4.2 - Southern platyfish
NoYes	Oreochromis niloticus 69_1.0 - Nile tilapia
NoYes	Drosophila melanogaster 69_5 - Fruit fly
NoYes	Caenorhabditis elegans 69_215 - Roundworm
NoYes	Homo sapiens 75_37 - Human
NoYes	Homo sapiens - Human
NoYes	Mus musculus 63_37 (longest transcript per gene) - House mouse
NoYes	Phoenix dactylifera - Date palm
NoYes	Acholeplasma laidlawii PG-8A
NoYes	1_050719N (meta-genome)
NoYes	2_050719S (meta-genome)
NoYes	3_050719R (meta-genome)
NoYes	4_050719Q (meta-genome)
NoYes	4_Deep_abyss (meta-genome)
NoYes	5_050719P (meta-genome)
NoYes	6_Upper_euphotic (meta-genome)
NoYes	Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)
NoYes	Air microbial communities Singapore indoor air filters 2 (meta-genome)
NoYes	Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)
NoYes	Bath Hot Springs, filamentous community (meta-genome)
NoYes	Bath Hot Springs, planktonic community (meta-genome)
NoYes	Cyphomyrmex longiscapus fungus garden (meta-genome)
NoYes	Dump bottom (Dump bottom) (meta-genome)
NoYes	Dump top (Dump top) (meta-genome)
NoYes	Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)
NoYes	Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)
NoYes	Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)
NoYes	Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)
NoYes	Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes
NoYes	Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)
NoYes	Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)
NoYes	Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)
NoYes	Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)
NoYes	Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)
NoYes	Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)
NoYes	Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)
NoYes	Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)
NoYes	Human Gut Community Subject 7 (meta-genome)
NoYes	Human Gut Community Subject 8 (meta-genome)
NoYes	Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)
NoYes	Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)
NoYes	NCBI 2017_08 genome
NoYes	Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)
NoYes	Protozoadb 2010_08 (Protozoadb)
NoYes	simHC - Simulated High Complexity Metagenome (meta-genome)
NoYes	Sludge/Australian, Phrap Assembly (meta-genome)
NoYes	Soil microbial communities from Minnesota Farm (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)
NoYes	Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)
NoYes	STRING v9.0.5 (STRING)
NoYes	Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)
NoYes	Uniprot 2018_03 genome
NoYes	Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)
NoYes	Global Ocean Sampling Expedition (GOS)
NoYes	NCBI plasmid sequences (Plasmids)
NoYes	NCBI viral sequences (Viral)
NoYes	PDB chains (SCOP 1.75) (PDB)
NoYes	Protein Data Bank (all PDB sequenc)
NoYes	SCOP2 SCOPe CATH ECOD (all domain sequ)
NoYes	TargetDB (Targets)
NoYes	UniProt viral sequences (Viral)
NoYes	ALL (only advised for small superfamilies)

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Rad50 coiled-coil Zn hook alignments