SUPERFAMILY 1.75 HMM library and genome assignments server

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Sema domain alignments in Meleagris gallopavo 69_2

These alignments are sequences aligned to the 0048597 model.

Sophisticated options are available for refining alignments:


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Alignments

The numbers along the top are the segment numbers of the HMM states, and each sequence is seperately aligned to the model.
The first sequence is the seed the model was built from.
Upper case letters are aligned, lower case letters are insertions, '-' signifies a deletion and '.' is nothing.

                                                              10        20        30        40      
                                                               |         |         |         |      
d1olza2               ..............................fa--PIPRITWEHREVHLVQFHEPDIYNYSALLLSEDKDTLYIGAREA
ENSMGAP00000005229  ...........................niprl--KLSYKDLLLSNSCIPFLGSTEGLDFRTLLLDEERGRLLVGAKDH
ENSMGAP00000004026  ............................tprv--QLSFKELKATGTAHFFNFLLNSSDYRILLKDEDHDRMYVGSKDY
ENSMGAP00000005689  ........................ftiselqg-----------TKTSEYHRISHSPLDYRILLMDEDQDRIYVGSKDH
ENSMGAP00000004382  ..........................rktvky-----------QTLNVEMFVKEGLSNVSALLVDEETDRLFVGGRDV
ENSMGAP00000009217  ...............ydlpnfitetpiqnvvl----------------------------------YKHHVYIGAVNK
ENSMGAP00000006788  .............................gne----------------------SQHRLDFQLMLKIRDTLYIAGRDQ
ENSMGAP00000010889  ..............................ae-------------RVVQRFEVPGVSNYTALLLSPDGGTLYLGAREV
ENSMGAP00000010623  ..........................rmtvtf-----------DELSGVRRFSGHSLNYTTLLLEDERGVLYVGARGA
ENSMGAP00000003557  ...............................q----------------------------------------------
ENSMGAP00000005371  ..........................lfqles----------------------------------------------
ENSMGAP00000014662  ................................----------------------------------------------
ENSMGAP00000004117  ..............................rl------------------FQLERSCCYEALLLDEERGRLFVGAKNH
ENSMGAP00000012627  ...............................t----------------------------------------------
ENSMGAP00000007644  ..............................tf--------------------SVTDWSLTHLVVHNKTGEVYVGAVNR
ENSMGAP00000004079  ...............................t-----------------FHSEHRDWTFNHLTVHQSTGAVYVGAINR
ENSMGAP00000008403  ..............................lk-------------------FFQSATELNHLTVDNDTGIIYLGVVNA
ENSMGAP00000006653  ...............................l----------------IHFHEPGVSNYSTLLLSEDRGVLYVGAREV
ENSMGAP00000009106  .............................tqr------------------------HRLDIQLVTVMNRTLYIAARDH
ENSMGAP00000006193  .............................cwl----------------------------------------------
ENSMGAP00000002465  ............................phcp----------------------------------------------
ENSMGAP00000002254  ..............................tf---------------------PRNEKYPVFYHETNSSSIYVGGEGV
ENSMGAP00000018938  ..............................le-----------SNNIVNFNGLANSSSYHTFLLDEERSRLYVGAKDH
ENSMGAP00000006527  ................................----------------------------------------------
ENSMGAP00000002518  .............................dsc----------------------------------------------
ENSMGAP00000010746  .........................lqpeqld----------------------------------------------
ENSMGAP00000011862  sehsfdlqgqvyldcgcrsllissslirqeer----------------------------------------------
ENSMGAP00000008155  ..........................lyaypc----------------------------------------------


                        50            60          70                 80        90        100       1
                         |             |           |                  |         |          |        
d1olza2               VFAVNALNISEK....QHEVYWKV..SEDKKAKCAEK.........GKSKQTECLNYIRVLQPLS.ATSLYVCGTNAF
ENSMGAP00000005229  IFLLNLVDLNKN....VKKIYWPA..AKEKLELCKLA.........GKDAHTECANFIRVLQPYN.RTHVYVCGTGAF
ENSMGAP00000004026  VLSLDLHDINRE....PLIIHWPA..SQQRIEECILS.........GKNSNGECGNFIRLIQPWN.RTHLYVCGTGAY
ENSMGAP00000005689  ILSLNINNISQD....PLSIWWPA..SANKVEECKMA.........GKDPTHGCGNFVRVIQSYN.RTHLYVCGSGAF
ENSMGAP00000004382  ISALDLNNISRE....TAREHWFA..TQERQLECIRR.........GKDKI-RCQNYILVLHKIN.DSHVYVCGTNAY
ENSMGAP00000009217  IYVLNET---LQ....NISVYKTG..PILESPGCAPCedckdkanlSNSIWKDNVNMALLLETYY.DDQLISCGS-MS
ENSMGAP00000006788  VYTVNLNEVPKSevtpSRKLTWRS..RQQDRENCAMK.........GKHKD-ECHNFIKVFVPRN.DEMVFVCGTNAF
ENSMGAP00000010889  LFAVNTSHFQHSal..ARRLPWGA..DEEKKRQCVFK.........GKDPQRDCHNYIKMLLQLN.STHLYTCGTCAF
ENSMGAP00000010623  IFAFNASNVADGs...HRMIRWEA..SPEKQLDCLQK.........GRNNKTECFNHVRFLQRLN.TTHLYACGTYAF
ENSMGAP00000003557  ------------....--------..-----------.........-----TDCANYVRLLQPYN.RTHLLACGTGAC
ENSMGAP00000005371  ------------....--------..-----------.........-------------------.------------
ENSMGAP00000014662  ------------....--------..-----------.........-------------------.------------
ENSMGAP00000004117  LLSLSLDNISQR....DRKIYWPA..PVEWREECNWA.........GKDITAECMNFVKILHAYN.RTHLYACGTGAF
ENSMGAP00000012627  ------------....----AWGS..DEDTRRSCQSK.........GKTEE-ECQNYVRVLIVYG.KK-VFTCGTNAF
ENSMGAP00000007644  IYKLSNN---LT....LLRTHVTG..PVEDNEKCYPPpsvqs....CPHGLVTTNNVNKLLLVDYsGNRLIACGS-AS
ENSMGAP00000004079  VYKLSGN---LT....ILVAHKTG..PEEDNKSCYPPlivqp....CSEVLTLTNNVNKLLIIDYsENRLLACGS-LY
ENSMGAP00000008403  LYQLTEN---LV....VRIHVETG..PRKDNKKCTPPieen.....QCKEAVLTDNYNKLLLLNKeNKTIVVCGS-LF
ENSMGAP00000006653  IFALNAVNIAEK....QHEVTTSVkpGEESNQNASRR.........AKEEEEPVLNSPSDLILDSiEK--HTC---SD
ENSMGAP00000009106  IYTVDMDTSHTEeiyfIKKLTWKS..RQADVDTCRMK.........GKHKD-ECHNFIKVLLKRN.EDTLFICGTNAF
ENSMGAP00000006193  ------------....-QAVEWQC..DEATKRACYSK.........GKSKE-ECQNYIRVLLVGG.NH-LFTCGTNAF
ENSMGAP00000002465  ------------....--------..-----------.........-------------------.------------
ENSMGAP00000002254  LYYYNFATSET-....--------..-----------.........-YPVREDNKNFITLIAKHG.SE-MLVCGTGAC
ENSMGAP00000018938  IFSFNLVNIKEY....QKLITWPV..SHSRRDECKWA.........GKDILRECANFIKVLKTYN.QTHLYACGTGAF
ENSMGAP00000006527  ------------....--------..-----------.........-------------------.------------
ENSMGAP00000002518  ------------....--------..-----------.........-------------------.------------
ENSMGAP00000010746  ------------....--------..-----------.........-------------------.------------
ENSMGAP00000011862  ------------....--------..-----------.........-------------------.------------
ENSMGAP00000008155  ------------....--------..-----------.........-------------------.------------


                      10       120                     130       140               150        160   
                       |         |                       |         |                 |          |   
d1olza2               QPACDHLNLTSFKFL..............GKNEDGKGRCPFDPAHSYTSVMV.....DG...ELYSGTSY.NFLGSEP
ENSMGAP00000005229  HPLCGYIELGTHKEEtifrldt.......QNLESGRLKCPFDPQQPFASVMA.....DE...YLYAGTAS.DFLGKDT
ENSMGAP00000004026  NPICAFINRGRKAQDyifylep.......DKLESGKGKCSYDPKVDTVSALI.....NE...ELYAGVYI.DFMGTDA
ENSMGAP00000005689  SPVCVYVNRGRRSEEqifkid........SKCESGKGRCSFNPNVNTVSVMI.....NE...ELFSGMYI.DFMGTDA
ENSMGAP00000004382  HPLCDHMVIQRTKMHlq............GRAEESRGKCPFEPTLKYASVFV.....DG...AFYSATSN.NFLGTEP
ENSMGAP00000009217  GGVCHRHIIPPDNPAdiesevhcmyspqvDGETENCPDCVVSTLGTKVLVTE.....KDrfvNFFVGNTVtSAFQPPH
ENSMGAP00000006788  NPMCRYYRLSTLDYD..............GEEISGLARCPFDARQTNVALFA.....DG...KLYSATVA.DFLASDA
ENSMGAP00000010889  SPTCAYINMQHFTLErdglgr........VLLEDGKGRCPFDPEYRSTAVMV.....DG...ELYAGTVS.NFQGNEP
ENSMGAP00000010623  HPLCASIDADRFTLP..............SRFEEGKEKCPYDPSRGYTGLIV.....DG...GLYTATRY.EFR-SLP
ENSMGAP00000003557  HPVCTFIYVGHRGETqhafnldp......GSMESGRGRCPHEPDRAFASTII.....GG...ELYAGLTA.DFLGRDP
ENSMGAP00000005371  ---------------..............HKFERGRGRCPFDPTSSFTSILI.....GG...ELFTGLYS.DYWGRDA
ENSMGAP00000014662  ---------------..............-----------------------.....DG...ELYSGTAA.DFMGRDF
ENSMGAP00000004117  HPTCAFVEVGQHTEDhifkldt.......RRAEDGKGKSPYDPRHAAASVLV.....GE...ELYSGVAT.DLMGRDF
ENSMGAP00000012627  SPVCSSRQVGNLSKI..............IDRINGVARCPYDPRHNSTAVITs....RG...ELYAATVI.DFSGRDP
ENSMGAP00000007644  QGICQFLRLDDLFKLge............PHHRKEHYLSSVNESGTMSGVIIevlngQN...KLFIGTPIdGKSEYFP
ENSMGAP00000004079  QGVCKLLRLDDLFILve............PSHKKEHYLSSVNKTGTMYGVIVrsegeDG...KLFIGTAVdGKQDYFP
ENSMGAP00000008403  KGICATRDLENITKVthyv..........ETSGEKSFVASNDENVSTVGLITsldn.DQ...VLFVGKGN.GPNDNGI
ENSMGAP00000006653  LPLTAHLNLILFELE..............GKNEDGKGRCPFDPAQSYTSVMV.....DE...ELYSGTSY.NFLGSEP
ENSMGAP00000009106  NPSCRNYKVDTLEFL..............GDEFSGMARCPYDAKHANVALFA.....EG...KLYSATVT.DFLAIDA
ENSMGAP00000006193  TPICTNRTMSMIKQI..............SFQISGEKKCIYSSRTNGNLFLQv....QQ...EIKALKVE.DQPKHNT
ENSMGAP00000002465  ---------------..............----------------------A.....DG...QLYSGTSS.DFMGSSA
ENSMGAP00000002254  NPTCWHLTEKKK---..............DAPQDGRGLAPFTPDTNSLVIVD.....YP...NIYSTIKKsQQNGKIP
ENSMGAP00000018938  HPVCTYIEVGSHPEQsltsycg.......FSFPNQRKKQYYSPSIPEISILH.....VS...ELNGGNSI.DVYKLGE
ENSMGAP00000006527  ---------------..............-----------------------.....--...--------.-------
ENSMGAP00000002518  ---------------..............-----------------------.....--...--------.-------
ENSMGAP00000010746  ---------------..............-----------------------.....--...--------.-------
ENSMGAP00000011862  ---------------..............-----------------------.....--...--------.-------
ENSMGAP00000008155  ---------------..............-----------------------.....--...--------.-------


                          170                  180       190                   200          210     
                            |                    |         |                     |            |     
d1olza2               IISRNSS..HS.........PLRTEYAIPWLNEPSFVFADV............IRKSPDSPDGEDDR...VYFFFTE.
ENSMGAP00000005229  ALTRSLG..PShdhhy....IRTDISEHYWLTGAKFIATFP............IPDTY---NPDDDK...IYFFFRE.
ENSMGAP00000004026  AIFRTMG..KQta.......MRTDQYNSRWLNDPAFVRAQL............IPDSS---ERNDDK...LYFFFRE.
ENSMGAP00000005689  AIFRSLT..KRna.......VRTDQHNSKWLSEPIFVDAHV............IPDGT---DPNDAK...IYFFFKE.
ENSMGAP00000004382  IILRSMQ..NP.........VRTE-FKTSWLNEPSFVGMEI............VPESEFSPDGDDDK...IYVFFTE.
ENSMGAP00000009217  VLHSISV..RR.........LKETQDGFEFLTDQSYIDILPqfrds.......YPVKYVHAFEHDHF...VYFLTVQ.
ENSMGAP00000006788  VIYRSMG..DGsa.......LRTIKYDSKWIKEPHFLHA--............--------IEYGNY...VYFFFRE.
ENSMGAP00000010889  TIYRSQE..S-.........---------------------............------XPDGDDDK...VYFFFSE.
ENSMGAP00000010623  DIRRNLHq.RP.........LKTEESPLHWLNDAEFVASML............VQESKDSLVGDDDK...IYYFFME.
ENSMGAP00000003557  GIFRSTGt.RA.........ALRTEVDQRLLNDPKFVAAYM............IPDND---DQDDDK...AYFFFTE.
ENSMGAP00000005371  AVFRTMNrmAH.........LRTEPDSERLLKEPKFVGSYM............IPDNE---DHDDNK...VYFFFTE.
ENSMGAP00000014662  AIFRTLGhhHP.........IRTEQHDSRWLNDPRFISAHL............IPESD---NPEDDK...IYFFFRE.
ENSMGAP00000004117  TIFRSMGsrPS.........VRTEQHDSRWLNEPKFVDVFW............VPESE---NPDDDK...IYFFFRE.
ENSMGAP00000012627  AIYRSLGnvPP.........LRTAQYNSKWLNEPNFIAA--............--------YDIGLF...TYFFFRE.
ENSMGAP00000007644  TLSSRKLm.ANeenaemfgfVYQDEFVSSQLKIPSD----Tlskfpt......FDIYYIYSFSSEQF...VYYLTLQ.
ENSMGAP00000004079  TLSSRKL..PRdpessa...M------LDYELHSDFVSSLIkipsdtlalishFDIFYIYGFASGNF...VYFLTVQp
ENSMGAP00000008403  IISTRQL..HEkdgkd....IFEMYSDSAAVKSAYHSS---............STQQFVTVFEDKNY...VYFIFNQ.
ENSMGAP00000006653  IISRNSH..QS.........PLRTEYAIPWLNEPSSIYLSVl...........QILHKGDNCPQDKAiwcIFFLSGI.
ENSMGAP00000009106  VIYRSLGesPT.........LRTVKHDSKWLKEPYFVQA--............--------VDYGNY...IYFFFRE.
ENSMGAP00000006193  LILRDLR..ELal.......LTNSAQNSNLFSEPNFVSS--............--------YDIGNF...TYFFFRE.
ENSMGAP00000002465  AFFRTEV..GGaergy....IRTEQHQDHWLHEPTFIGAFA............IPDTH---NPHDDK...VYIFFRE.
ENSMGAP00000002254  RFRRVKG..DG.........ELYT--SDTVMQNPQFVKATT............LKHE----DSYQDK...IYYFFRE.
ENSMGAP00000018938  QFSLVIL..DK.........HFHKKTRMHWNRLIYEVNFSSvh..........FPDIV---NREGEK...CWLIAVE.
ENSMGAP00000006527  -------..--.........---------------------............--------------...-------.
ENSMGAP00000002518  -------..--.........---------------------............--------------...-------.
ENSMGAP00000010746  -------..--.........---------------------............--------------...-------.
ENSMGAP00000011862  -------..--.........---------------------............--------------...-------.
ENSMGAP00000008155  -------..--.........---------------------............--------------...-------.


                                 220       230       240         250             260              27
                                   |         |         |           |               |                
d1olza2               ...VSVE.....YEFVFRVLIPRIARVCKGDQGG.LRTLQ.KKWTSFLK......ARLICSRPDS.......GLVFNV
ENSMGAP00000005229  ...ISQD.....SSTSDKTILSRVGRVCKNDMGG.QRSLI.NKWTTFLK......ARLVCSIPGPega....DTHFDE
ENSMGAP00000004026  ...KSAD.....A-PLSPGVYSRIGRICLNDDGG.HCCLV.NKWSTFLK......ARLVCSVPGPdgi....ETHFDE
ENSMGAP00000005689  ...RLTD.....NSGSTKQIHSMIARICPNDTGG.QRSLV.NKWTTFLK......ARLVCSVMDEdgt....ETYFDE
ENSMGAP00000004382  ...TAVE.....FEFYDKILVSRIARICKGDLGG.KRLLQ.RRWTSFLK......ARLSCSVPEL.......NFHFNI
ENSMGAP00000009217  ...RESL.....D---SQTFHTRIIRFCTLD---.-----.SEMRSYME......MPLECIFTEKrrkrsirKEVFNI
ENSMGAP00000006788  ...IAVE.....HNNIGKAVYSRVARICKNDMGGsQRVLE.KHWTSFLK......ARLNCSVPGDs......FFYFDV
ENSMGAP00000010889  ...TGKE.....FDYFENTIVSRIARVCKGDQGG.ERVLQ.RRWTTFLK......AQLLCSHPED.......GFPFNV
ENSMGAP00000010623  ...RAGEettsfFDKSQVARVARVARVCKSDLGG.KKILQ.RKWTSFMK......ARLVCYIPY-.......---YEV
ENSMGAP00000003557  ...KVVE.....ADSKEHTIVSRVARVCVNDAGG.QRVLV.NKWSTFNK......ARLVCSVPGPggi....DTHFDE
ENSMGAP00000005371  ...KALE.....AETSTHAIYTRVGRVCVNDMGG.QRMLV.NKWSTFLK......TRLVCSVPGRngi....DTHFDE
ENSMGAP00000014662  ...NAID.....GEHTGKATHARIGQICKNDFGG.HRSLV.NKWTTFLK......ARLICSVPGPngi....DTHFDE
ENSMGAP00000004117  ...MAVEr....QQGLGKASISRIGQICRNDVGG.QRSLV.NKWTTFLK......ARLVCAVPGTdga....DTHFDE
ENSMGAP00000012627  ...NAVE.....HD-CGKTVYSRVARVCKNDIGG.RFLLE.DTWTTFMK......ARLNCSRAGEi......PFYYNE
ENSMGAP00000007644  ...LDTQltsp.DSTGEQFFTSKIVRLCVDD---.-----.PKFYSYVE......FPIGCVQDGI.......E--YRL
ENSMGAP00000004079  etpEGVS.....NSASDLFYTSRIVRLCKDD---.-----.PKFHSYVS......LPFGCVRGDT.......E--YRL
ENSMGAP00000008403  ...QEKQ.....P----VNNRTLIARLCKDD---.-----.AHYYSYFE......MDLGCKDEDG.......S--YDH
ENSMGAP00000006653  ...ANVR.....HAFVFYKDTFFFSQCQKRDQGG.LRTLQ.KKWTSFLK......ARLICTIPDK.......NLIFNI
ENSMGAP00000009106  ...IAVE.....YNSMGKVVFPRVAQVCKNDMGGsQRVLE.KQWTSFLK......ARLNCSVPGDs......HFYFNI
ENSMGAP00000006193  ...NAVE.....HD-CGKTVFSRAARVCKNDIGG.KFVLE.DTWTTFMK......ARLNCSRPGEi......PFYYNE
ENSMGAP00000002465  ...TALDg....GQWERRHIHARVARVCKNDVGG.KRGLI.NRWSTFLK......ARLLCSIPGPqgt....QTHFDQ
ENSMGAP00000002254  ...DNPD.....KSPEAPRNISRVAQLCKEDKGG.TSSLSaSKWTTFLK......ASLICVDPAT.......KGNFNW
ENSMGAP00000018938  ...NCIQ.....GAERSKTERKRTSQICYYQ---.NKFEK.QHYSMFNKkitiklINLLLDVSGIlgi....VTSKNS
ENSMGAP00000006527  ...----.....----------------------.-----.--------......----------.......------
ENSMGAP00000002518  ...----.....----------------------.-----.--------......----------.......------
ENSMGAP00000010746  ...----.....----------------------.-----.--------......----------.......------
ENSMGAP00000011862  ...----.....----------------------.-----.--------......----------.......------
ENSMGAP00000008155  ...----.....----------------------.-----.--------......----------.......------


                      0       280                290             300       310           320        
                      |         |                  |               |         |             |        
d1olza2               LRDVFVLRSPGL.........KVPVFYALFT..PQLN....NVGLSAVCAYNLSTAEEVFSHGK....YMQSTT.VEQ
ENSMGAP00000005229  LQDIFLLSTRDE.........RNPLVYGVFT..TTSS....VFKGSAVCVYSMADIRAVFNGP-....---YAH.KES
ENSMGAP00000004026  LQDVFIQQTQDT.........KNPVIYAVFS..ASGS....VFKGSAVCVYSMADIRMVFNGP-....---FAH.KEG
ENSMGAP00000005689  LEDVFLLETDNP.........RTTLVYGIFT..TSSS....IFKGSAVCVYHLSDIQTVFNGP-....---FAH.KEG
ENSMGAP00000004382  IQDIFFLRRRKW.........QDSIFYGIFS..QQWG....RLDTSAVCAYSMASIREAFSKGS....YRGPIT.VEH
ENSMGAP00000009217  LQAAYVSKPGAAlahemglglNDDILYGVFA..QSKPdssePTNRSAVCAVSVRTINEFFNKIVdkqnMKCLQH.FYG
ENSMGAP00000006788  LQSITDIIEING.........I-PTVVGVFT..TQLN....SIPGSAVCAFSMDDIEKVFKGR-....---FKE.QKT
ENSMGAP00000010889  LQDVFVLTPGEQrw.......RETLFYGVFT..SQWNkg..GLGSSAVCAFPMHSVQKAFGGL-....---YKE.VNR
ENSMGAP00000010623  LHSVCSLDSGGW.........ASTVFYAAFTlsAQWR....TMEASAVCRYDISEVQRAFEGP-....---YME.YQD
ENSMGAP00000003557  LEDVFLLRTKDG.........KNPEIYALFS..TVSH....VFQGSAVCVYRMADIREVFNGP-....---FAH.RDS
ENSMGAP00000005371  LEDVFLLQTRDN.........KNPVIFGLFS..TTSN....IFRGYAICVYHMASVRAAFNGP-....---YAH.KEG
ENSMGAP00000014662  LQDVFLMNSKDP.........KNPIVYGVFT..TSSN....IFKGSAVCMYSMTDVRRVFLGP-....---YAH.RDG
ENSMGAP00000004117  LRDVFLLQTRDK.........RNPLVYAAFS..TSSS....IFQGSAVCIYTMADIRRAFLGP-....---FAH.KEG
ENSMGAP00000012627  LQSTFYLPEQD-.........---LIYGVFT..TNVN....SIAASAVCAFNLSAITQAFNGP-....---FRY.QEN
ENSMGAP00000007644  IQDAYLTKPGKAlakylgiseREDILFTIFS..QGQKnrvkPPKESVLCLFTLKKIKDKIKERI....QSCYRG.EGK
ENSMGAP00000004079  LQAAYLSKPGDVlakslnitaQEDVLFAIFS..KGQKqyhqPPDDSALCVFPIRAVNAQIKDRL....QSCYQG.EGN
ENSMGAP00000008403  CHSAYVTTPDSAs........DDKVLVALFSkvNKDN....GSLKSAMCVFSLRHINEKMEKNR....DDCYTNkNTS
ENSMGAP00000006653  INDVFILKSPTL.........KEPVIYGVFT..PQLN....NVGLSAVCAYNLSTVEEVFSKGK....YMQSAT.VEQ
ENSMGAP00000009106  LQAVTDVIHFNG.........R-DVVLATFS..TPYN....SISMSSCCGIDTQESQSCLSRA-....---VTQqRGT
ENSMGAP00000006193  LQSTFFLPELD-.........---LIYGIFT..TNVN....SIAASAVCVFNLSAITQAFNGP-....---FKY.QEN
ENSMGAP00000002465  LEDVFLLHTRDP.........QNPLVFGLFT..ASSA....VFSGSAVCVYSMAAVRAAFSGP-....---FIH.---
ENSMGAP00000002254  LQDVFFVNASDW.........RDSKVYGLFT..NTWG....---SSAVCVYSFGDIDNVFRTSK....LKGY--.---
ENSMGAP00000018938  NEIVFFLSSMSK.........KKNIFYTKFT..TDKS....LLRGSETCIWSFLNQTEIFLGN-....-----H.RKT
ENSMGAP00000006527  ------------.........----------..----....-----------------------....------.---
ENSMGAP00000002518  ------------.........----------..----....-----------------------....------.---
ENSMGAP00000010746  ------------.........----------..----....-----------------------....------.---
ENSMGAP00000011862  ------------.........--GWWVGVFH..HNHGdr..AWDSTAVCVFRMEELQDPTSRL-....---F--.---
ENSMGAP00000008155  ------------.........----------..----....-----------------------....------.---


                      330        340       350         360       370       380        390           
                        |          |         |           |         |         |          |           
d1olza2               SHTKWVRYN.GPVPKPRPGACIDS..EARAANYTSSLNLPDKTLQFVKDHPLMDDSV.TPIDNRPRLIKKD.....VN
ENSMGAP00000005229  ADHRWVQYE.GRIPYPRPGTCPSK..-TYDPLIKSTRDFPDEVISFIKRHPLMYKSV.YPLTGGPVFTRINvd...YR
ENSMGAP00000004026  PNYQWMPYT.GKMPYPRPGTCPGG..-TFTPSMKSTKDYPDEVINFMRSHPLMYHAV.YPAHRQPLVVRTNvn...YR
ENSMGAP00000005689  PNHQLIPYQ.GRIPYPRPGTCPGG..-AFTPNMRTTKEFPDDVVTFIRNHPLMYNPI.YPIHKRPLIIRIGtd...YK
ENSMGAP00000004382  SHVRWMVFR.GEVPVPRPGACIDN..FARNLGYNTSSDLPDKVLQFARDHPLMDGSV.NPIGERPALLKRS.....SN
ENSMGAP00000009217  KDSKY----.----------CLNR..-AFSRNAS---------YCRAQDDEYRLEVT.TPLQRVDLFMGQFnn...IL
ENSMGAP00000006788  PDSVWTAVPeDKVPKPRPGCCAKH..-GLAEAYKTSIDFPDETLSFIKSHPLMDSAV.PSIIEEPWFTKTRvsldrYR
ENSMGAP00000010889  ETQQWYTDT.SPVPEPRPGTCITS..HTRHLKINSSLQMPDRVLNFVKDHFLMDSPV.---RSQPLLLQSR.....LR
ENSMGAP00000010623  SSRKWSRYD.GAVPEPRPGSCITD..SSRRRGYNSSQDLPNSVLDFVKLHPLMFEEV.QPAGGEPLLVKRS.....VA
ENSMGAP00000003557  PLHQWGAYE.GRVPYPRPGVCPSKttNQPQRPYRSTKELPDEVLHFARAHPLMYRPV.RPRHHRPLLVKTDlq...HG
ENSMGAP00000005371  PEYHWALYE.GKVPYPRPGSCASK..-VNGGLYTTTKDYPDEAVHFARSHPLMYQPI.KPVHKRPILVKTDgk...YN
ENSMGAP00000014662  PNYQWVPYQ.GRVPYPRPGTCPSK..--TFGGFDSTKDLPDEVITFARSHPAMYNPV.FPINNRPIMIKTDvd...YQ
ENSMGAP00000004117  PNYQWVPYQ.ARVPYPRPGMAPA-..-------------------------------.-------------.....--
ENSMGAP00000012627  PRSAWLPTA.NPIPNFQCGTLSDD..-------SPNENLTERVLQDAQRLFLMNDVV.QPVTVDPYVTQDS.....IR
ENSMGAP00000007644  LSLPWLLNK.EL-------GCINS..-PLQIDDNFCG----------QDFNQPLGGT.VTIEGTPLFVDKE.....DG
ENSMGAP00000004079  LELNWLLGK.DV-------QCTKA..-----------PVPIDDNFCGLDINQPLGGS.VPVDGVTLFTSSR.....DR
ENSMGAP00000008403  MFYKLFAVE.NP--------CG--..---PHGQNASKNFP----CGSEHLPYLLGSK.NGVIEKPVLQKEG.....MN
ENSMGAP00000006653  SHTKWVRYN.GEIPKPRPGAVRSE..ETRKANKQKK--CNKNKKALLKDHPLMDDSV.TPMGDRPRLVKRD.....VK
ENSMGAP00000009106  SKVSWRSIGdDSDPSITSETCIED..-SSLHIYIVSLEILASVISFINTIPLMSVALpTSAFGQPNWCKKVlk...YR
ENSMGAP00000006193  SRSAWLPYP.NPNPNFQCGTMDQG..--------LYVNLTERNLQDAQKFFLMHEVV.QPVIPIPYFMEDN.....SR
ENSMGAP00000002465  ---------.-----PSRDTCPSE..-TYDPLLRSTKDFPDEVISFVRAHQLMWEPI.HPLGRRPVLLRANvp...YR
ENSMGAP00000002254  --------D.GPDPEIKPGQCVPF..---------RQHTPSETFKIADSHPEVENRV.EPLAPTRSPLFHNk....HR
ENSMGAP00000018938  KEAKWAERL.VHFPHHNPSTCQF-..-LVLEQRNSSRLFIAITLTITKSRRAIVQIC.FCVVNKRPSTKPNtd...MK
ENSMGAP00000006527  ---------.----------CITD..WHRQNGFPSSLALPDNTLNFAKKHPLMDEPV.LPQRGRPLLLKKD.....SN
ENSMGAP00000002518  ---------.--------------..-------TSSSTFPDEILTFVKTHPLMDEAV.PSLGNAPWIVRTMsr...YQ
ENSMGAP00000010746  ---------.--------------..------------------CGAAHLQHPLAIV.NPITATPILTYNG.....--
ENSMGAP00000011862  --RDWFYVVaECICSPSDRCC---..-----------------------------QV.QSIKKSPTLIHSGlv...AV
ENSMGAP00000008155  ---------.--------------..-------------------GSDHTPSPMASR.VPLEAAPLLETTE.....SR


                       400       410       420       430                440                450      
                         |         |         |         |                  |                  |      
d1olza2               YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHA.........VHIIEETQLFQD.........FEPVQT.LLL
ENSMGAP00000005229  LTQIVVDHVMAEDGQ-YDVIFLGTDIGTVLKAVSITKEkwske....EVVLEELQIFKH.........PSFIST.MEI
ENSMGAP00000004026  FTTIAVDQVDAADGR-YEVLFLGTDRGTVQKVIVLPRDdmete....ELMLEEIEVFKV.........PAPIKV.MTI
ENSMGAP00000005689  YTKIAVDRVNAADGR-YHVLFLGTDQGTVQKVVVLPTNfsasg....ELILEELEVFQS.........NTPITT.MKI
ENSMGAP00000004382  YTRIVVDRVTGLDKQTYDVMFLGTDDGYLHKAFNCDGE.........MFIVEELQLFLS.........PEPVQF.LQL
ENSMGAP00000009217  LTSISVFTKGN-----LTIANLGTSEGRFMQIVVSRSEs........TAPHVSFQLDSH.........PVSPQV.VVE
ENSMGAP00000006788  LTAIAVDHAAGPHQN-YTVIFVGSEAGVVLKILAKTRPfslnd....SVLLEEIEAYNHakcnaenedDRRVIS.LQL
ENSMGAP00000010889  YQQIGVHRVQGLRGT-YDVLFLGTDDGRLHKAVRVNHR.........VHIIEEIRLFPT.........GQPILQ.LLL
ENSMGAP00000010623  YSRLAVDRVQALDGRSYDVLFMGTGDGWLHKAVVLGSS.........LHIIEEAQVFQD.........SQPIET.LVV
ENSMGAP00000003557  LRQLVVDRVDTEDGQ-HDVLFLGTDAGSVLKVVVLQKQssavte...EVVLEELQVFKV.........PVPITQ.MEI
ENSMGAP00000005371  LKQIAVDRVEAEDGQ-YDVLFIGTDNGIVLKVITIYNQetesme...EVILEELQVFKV.........PIPIIS.MEI
ENSMGAP00000014662  FTQIVVDRVDAEDGQ-YDVMFIGTDIGTVLKVVSIPKEtwhele...EVLLEEMTVFRE.........PTVISA.MKI
ENSMGAP00000004117  --------------------------------------.........------------.........------.---
ENSMGAP00000012627  FSKLVVDIVQGKDTL-YHVMYIGTEYGTILKALSTTNRslr......SCYLEEMQILPDgq.......REAIKS.LQI
ENSMGAP00000007644  MTSVAAYDYRG-----QTVVFAGTRSGKIKKILVDLPAdrkhq....ALQYENVVAHEG.........SSILRD.LVL
ENSMGAP00000004079  MTSVASYIYNG-----YSVVFVGTKNGKVKKIRADGPPhg.......GIQYEVVTVFKD.........GSPVLRdMAF
ENSMGAP00000008403  LTAVTVTVENG-----HTVAFLGTSDGKILKVFLS-ST.........VTEYSSLTIELN.........KPIKND.LVL
ENSMGAP00000006653  YTQIVVDRVRALNGTIYDVMFISTDQGALHKAISYENG.........MHIIEETQLFPN.........FEPVQT.LIL
ENSMGAP00000009106  LTKIAVDSAAGPFKN-YTVVFLGSEKGIILKFLARTGNsgflnd...SLFLEEMNIYNP.........EKCVSD.SFY
ENSMGAP00000006193  FSHVVVDVVQGKDML-FHIIYLATDYGTIKKVLAPMNQtss......SCLLEEIELLPKsq.......REPIRS.LQI
ENSMGAP00000002465  LRQLLVHRLEAEGRH-YDVLFLGTDDGKVLKVGLPGEAgae......AVSLEEISVTEV.........PSPILD.MKL
ENSMGAP00000002254  YQKIGVHEVSASDGHQYTVLYLATDRGSIHKVVELPGG.........VHNIMELQVFSK.........KDPIQS.MIL
ENSMGAP00000018938  VLQIIVESAKSTKGN-MDVKMITTALSARIKSFLVRRSkvrklh...RILVEELGIVHE.........WTVINI.MKL
ENSMGAP00000006527  FTQLVVDRVAGLDGAVYEVLFVGTGDGWVHKALNLGSH.........VHLVEELQVFEP.........AQPVES.LVL
ENSMGAP00000002518  LRKIVVDNAAGPWGN-HTVVFLGSSKGTILKFLIHPRPacsraggdrSWGHTELCPIPRcgrdted..ERRLLG.LEL
ENSMGAP00000010746  LTAVAVTSINN-----YTVVFLGTASGGLLKINLDSAM.........RVVSRRSISVAY.........GEPVHP.IMQ
ENSMGAP00000011862  YGTVVLN---------QIVLFLGTDDGQLLKAILNEDMk........SNCPEILYEIEEe........TSIFPK.LRL
ENSMGAP00000008155  LTAVAVNVEDG-----HTIAFLGDSRGRLHKVL-----.........------------.........------.---


                        460       470                             
                          |         |                             
d1olza2               SSKKGNRFVYAGSNSGVVQAPL-a....................
ENSMGAP00000005229  SQK--QQQLYIGSRDGLVQLSLHrchty................
ENSMGAP00000004026  SSK--RQQLYVSSAVGVTHLALHrcdiy................
ENSMGAP00000005689  SSK--KQQLYVSSEEGITQVPLHrchiy................
ENSMGAP00000004382  SAK--KGMLYVGALSAVVQLPV-.....................
ENSMGAP00000009217  QSAAADGYTLVVTGKKITKVPL-.....................
ENSMGAP00000006788  DRD--HHALFVAFSSCVIRIPL-srcerh...............
ENSMGAP00000010889  DHE--QGLVYAASYTAVAQVPF-.....................
ENSMGAP00000010623  SRR--QRSLYVGAASGVLQVPLA.....................
ENSMGAP00000003557  SVK--RQKLYVGASLGVAQVRLHqcksy................
ENSMGAP00000005371  SSK--RQQLYIGTESVIAQVKFHqcdmy................
ENSMGAP00000014662  STK--------------------.....................
ENSMGAP00000004117  -----------------------e....................
ENSMGAP00000012627  LHS--DRSLFVGLNNGVLKIPLErcsmy................
ENSMGAP00000007644  SPD--RQHLYAMTEKQVTRVPV-.....................
ENSMGAP00000004079  SID--HKYLYVMSERQVSRVPV-.....................
ENSMGAP00000008403  DKT--QAYLYVMTTDKVHRLPV-.....................
ENSMGAP00000006653  SSKKSRRYLYAGSNSGVVQSPV-.....................
ENSMGAP00000009106  SKM--------------------llhmqihsggitfyltfntdc
ENSMGAP00000006193  LHS--QSVLFVGLQEHVIKVPL-krclfy...............
ENSMGAP00000002465  SPK--RQELLVSSTQGLLQLSL-srcely...............
ENSMGAP00000002254  DHE--RAMLYVGSSRKVVEIA--m....................
ENSMGAP00000018938  VTE-KQQQLYIGSATGVSQLPLHrcdiy................
ENSMGAP00000006527  AGR--KKLLFAGSRLQVAQLPVAdcgry................
ENSMGAP00000002518  DKA--AGSLLLAFPPCVARVPV-arcqqh...............
ENSMGAP00000010746  FDPSDPTYLYLMTSYQMTRVKV-.....................
ENSMGAP00000011862  DP-VDSNYIYLFSANKVRRIPV-.....................
ENSMGAP00000008155  -----------------------kv...................


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Model: 0048597 (list models)
Initial SAMT99 seed:
Alignment:



Display Options:
Output in FASTA-like format: NoYes
Output column indices: NoYes
Sequence index (number) on each line: NoYes

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Add alignments from genomes

Select below additional genomes you would like to see alignments for, then click on 'Re-Submit'. The genome assignments will be added to this page.


Select to display   Genome
NoYes   Danio rerio 58 (pseudogenes) - Zebrafish
NoYes   Gallus gallus 58 (pseudogene) - Chicken
NoYes   Homo sapiens 58 (pseudogenes) - Human
NoYes   Homo sapiens 76_38 - Human
NoYes   Pan troglodytes 76_2.1.4 - Chimpanzee
NoYes   Gorilla gorilla 76_3.1 - Western gorilla
NoYes   Pongo abelii 76_2 - Sumatran orangutan
NoYes   Tarsius syrichta 76_1
NoYes   Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbon
NoYes   Papio anubis 76 - Olive baboon
NoYes   Macaca mulatta 76_1 - Rhesus monkey
NoYes   Callithrix jacchus 76_3.2.1 - White-tufted-ear marmoset
NoYes   Otolemur garnettii 76_3 - Small-eared galago
NoYes   Microcebus murinus 76_1 - Gray mouse lemur
NoYes   Rattus norvegicus 76_5.0 - Norway rat
NoYes   Mus musculus 76_38 - House mouse
NoYes   Dipodomys ordii 76_1 - Ord's kangaroo rat
NoYes   Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrel
NoYes   Heterocephalus glaber v1.7-2 - Naked mole-rat
NoYes   Cavia porcellus 76_3 - Domestic guinea pig
NoYes   Oryctolagus cuniculus 76_2 - Rabbit
NoYes   Ochotona princeps 76 - American pika
NoYes   Tupaia belangeri 76 - Northern tree shrew
NoYes   Sus scrofa 76_10.2 - Pig
NoYes   Bos taurus 76_3.1 - Cattle
NoYes   Ovis aries 76_3.1 - Sheep
NoYes   Vicugna pacos 76_1 - Alpaca
NoYes   Tursiops truncatus 76_1 - Bottlenose dolphin
NoYes   Mustela putorius furo 76_1.0 - Domestic ferret
NoYes   Ailuropoda melanoleuca 76_1 - Giant panda
NoYes   Canis familiaris 76_3.1 - Dog
NoYes   Felis catus 76_6.2 - Domestic cat
NoYes   Equus caballus 76_2 - Horse
NoYes   Myotis lucifugus 76_2.0 - Little brown bat
NoYes   Pteropus vampyrus 76_1 - Large flying fox
NoYes   Sorex araneus 76_1 - European shrew
NoYes   Erinaceus europaeus 76 - Western European hedgehog
NoYes   Procavia capensis 76_1 - Cape rock hyrax
NoYes   Loxodonta africana 76_3 - African savanna elephant
NoYes   Echinops telfairi 76 - Small Madagascar hedgehog
NoYes   Dasypus novemcinctus 76_2 - Nine-banded armadillo
NoYes   Choloepus hoffmanni 76_1 - Hoffmann's two-fingered sloth
NoYes   Macropus eugenii 76_1.0 - Tammar wallaby
NoYes   Sarcophilus harrisii 76_7.0 - Tasmanian devil
NoYes   Monodelphis domestica 76_5 - Gray short-tailed opossum
NoYes   Ornithorhynchus anatinus 76_5 - Platypus
NoYes   Saccoglossus kowalevskii v3.0
NoYes   Petromyzon marinus 76_7.0 - Sea lamprey
NoYes   Meleagris gallopavo 76_2 - Turkey
NoYes   Gallus gallus 76_4 - Chicken
NoYes   Anas platyrhynchos 76_1.0 - Mallard
NoYes   Taeniopygia guttata 76_3.2.4 - Zebra finch
NoYes   Ficedula albicollis 76_1.0 - Collared flycatcher
NoYes   Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtle
NoYes   Anolis carolinensis 76_2.0 - Green anole
NoYes   Xenopus laevis - African clawed frog
NoYes   Xenopus tropicalis 76_4.2 - Tropical clawed frog
NoYes   Latimeria chalumnae 76_1 - Coelacanth
NoYes   Lepisosteus oculatus 76 - Spotted gar
NoYes   Gadus morhua 76_1 - Atlantic cod
NoYes   Tetraodon nigroviridis 76_8 - Spotted green pufferfish
NoYes   Takifugu rubripes 76_4 - Torafugu
NoYes   Gasterosteus aculeatus 76_1 - Three-spined stickleback
NoYes   Oryzias latipes 76_1 - Japanese medaka
NoYes   Xiphophorus maculatus 76_4.4.2 - Southern platyfish
NoYes   Poecilia formosa 76 - Amazon molly
NoYes   Oreochromis niloticus 76_1.0 - Nile tilapia
NoYes   Astyanax mexicanus 76 - Mexican tetra
NoYes   Danio rerio 76_9 - Zebrafish
NoYes   Oikopleura dioica
NoYes   Ciona savignyi 76_2.0 - Pacific transparent sea squirt
NoYes   Ciona intestinalis 76 - Vase tunicate
NoYes   Strongylocentrotus purpuratus v3.1 - Purple sea urchin
NoYes   Adineta vaga
NoYes   Octopus bimaculoides 280
NoYes   Crassostrea gigas 22 - Pacific oyster
NoYes   Lottia gigantea - Owl limpet
NoYes   Helobdella robusta
NoYes   Capitella sp. I
NoYes   Danaus plexippus OGS1.0 - Monarch butterfly
NoYes   Heliconius melpomene - Postman butterfly
NoYes   Bombyx mori - Domestic silkworm
NoYes   Nasonia vitripennis - Jewel wasp
NoYes   Apis mellifera 38.2d - Honey bee
NoYes   Harpegnathos saltator v3.3 - Jerdon's jumping ant
NoYes   Linepithema humile v1.1 - Argentine ant
NoYes   Pogonomyrmex barbatus v1.2 - Red harvester ant
NoYes   Solenopsis invicta v.2.2.3 - Red fire ant
NoYes   Acromyrmex echinatior v3.8 - Panamanian leafcutter ant
NoYes   Atta cephalotes v1.1
NoYes   Camponotus floridanus v3.3 - Florida carpenter ant
NoYes   Lucilia cuprina - Australian sheep blowfly
NoYes   Drosophila grimshawi 1.3
NoYes   Drosophila willistoni 1.3
NoYes   Drosophila pseudoobscura 2.13
NoYes   Drosophila persimilis 1.3
NoYes   Drosophila suzukii
NoYes   Drosophila yakuba 1.3
NoYes   Drosophila simulans 1.3
NoYes   Drosophila sechellia 1.3
NoYes   Drosophila melanogaster 76_5 - Fruit fly
NoYes   Drosophila erecta 1.3
NoYes   Drosophila ananassae 1.3
NoYes   Drosophila virilis 1.2
NoYes   Drosophila mojavensis 1.3
NoYes   Megaselia scalaris 22
NoYes   Aedes aegypti 55 - Yellow fever mosquito
NoYes   Culex pipiens quinquefasciatus - Southern house mosquito
NoYes   Anopheles darlingi 22 - American malaria mosquito
NoYes   Anopheles gambiae 49_3j - African malaria mosquito
NoYes   Tribolium castaneum 3.0 - Red flour beetle
NoYes   Pediculus humanus corporis - Human body louse
NoYes   Acyrthosiphon pisum - Pea aphid
NoYes   Rhodnius prolixus 22
NoYes   Daphnia pulex - Common water flea
NoYes   Strigamia maritima 22
NoYes   Sarcoptes scabiei
NoYes   Tetranychus urticae - Two-spotted spider mite
NoYes   Ixodes scapularis - Black-legged tick
NoYes   Pristionchus pacificus
NoYes   Meloidogyne incognita - Southern root-knot nematode
NoYes   Meloidogyne hapla
NoYes   Onchocerca volvulus 22
NoYes   Brugia malayi WS250 - Agent of lymphatic filariasis
NoYes   Caenorhabditis japonica
NoYes   Caenorhabditis brenneri
NoYes   Caenorhabditis remanei
NoYes   Caenorhabditis elegans 76_235 - Roundworm
NoYes   Caenorhabditis briggsae 2
NoYes   Trichinella spiralis 22
NoYes   Hymenolepis microstoma
NoYes   Echinococcus multilocularis
NoYes   Echinococcus granulosus
NoYes   Taenia solium - Pork tapeworm
NoYes   Schistosoma mansoni
NoYes   Mnemiopsis leidyi - Sea walnut
NoYes   Acropora digitifera v1.0
NoYes   Nematostella vectensis 1.0 - Starlet sea anemone
NoYes   Hydra vulgaris
NoYes   Amphimedon queenslandica
NoYes   Trichoplax adhaerens
NoYes   Proterospongia sp. ATCC 50818
NoYes   Monosiga brevicollis
NoYes   Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frog
NoYes   Drosophila melanogaster FlyBase 5.12 - Fruit fly
NoYes   Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquito
NoYes   Ascaris suum Victoria/Ghent - Pig roundworm
NoYes   Caenorhabditis elegans WormBase WS218 - Roundworm
NoYes   Homo sapiens 69_37 - Human
NoYes   Pan troglodytes 69_2.1.4 - Chimpanzee
NoYes   Gorilla gorilla 69_3.1 - Western gorilla
NoYes   Pongo abelii 69_2 - Sumatran orangutan
NoYes   Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbon
NoYes   Macaca mulatta 69_1 - Rhesus monkey
NoYes   Callithrix jacchus 69_3.2.1 - White-tufted-ear marmoset
NoYes   Otolemur garnettii 69_3 - Small-eared galago
NoYes   Tarsius syrichta 69_1
NoYes   Microcebus murinus 69_1 - Gray mouse lemur
NoYes   Rattus norvegicus 69_3.4 - Norway rat
NoYes   Mus musculus 69_38 - House mouse
NoYes   Dipodomys ordii 69_1 - Ord's kangaroo rat
NoYes   Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrel
NoYes   Cavia porcellus 69_3 - Domestic guinea pig
NoYes   Oryctolagus cuniculus 69_2 - Rabbit
NoYes   Ochotona princeps 69 - American pika
NoYes   Tupaia belangeri 69 - Northern tree shrew
NoYes   Sus scrofa 69_10.2 - Pig
NoYes   Bos taurus 69_3.1 - Cattle
NoYes   Vicugna pacos 69_1 - Alpaca
NoYes   Tursiops truncatus 69_1 - Bottlenose dolphin
NoYes   Mustela putorius furo 69_1.0 - Domestic ferret
NoYes   Ailuropoda melanoleuca 69_1 - Giant panda
NoYes   Canis familiaris 69_3.1 - Dog
NoYes   Felis catus 69 - Domestic cat
NoYes   Equus caballus 69_2 - Horse
NoYes   Myotis lucifugus 69_2.0 - Little brown bat
NoYes   Pteropus vampyrus 69_1 - Large flying fox
NoYes   Sorex araneus 69_1 - European shrew
NoYes   Erinaceus europaeus 69 - Western European hedgehog
NoYes   Procavia capensis 69_1 - Cape rock hyrax
NoYes   Loxodonta africana 69_3 - African savanna elephant
NoYes   Echinops telfairi 69 - Small Madagascar hedgehog
NoYes   Dasypus novemcinctus 69_2 - Nine-banded armadillo
NoYes   Choloepus hoffmanni 69_1 - Hoffmann's two-fingered sloth
NoYes   Macropus eugenii 69_1.0 - Tammar wallaby
NoYes   Sarcophilus harrisii 69_7.0 - Tasmanian devil
NoYes   Monodelphis domestica 69_5 - Gray short-tailed opossum
NoYes   Ornithorhynchus anatinus 69_5 - Platypus
NoYes   Petromyzon marinus 69_7.0 - Sea lamprey
NoYes   Meleagris gallopavo 69_2 - Turkey
NoYes   Gallus gallus 69_2 - Chicken
NoYes   Taeniopygia guttata 69_3.2.4 - Zebra finch
NoYes   Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtle
NoYes   Anolis carolinensis 69_2.0 - Green anole
NoYes   Xenopus tropicalis 69_4.2 - Tropical clawed frog
NoYes   Latimeria chalumnae 69_1 - Coelacanth
NoYes   Gadus morhua 69_1 - Atlantic cod
NoYes   Tetraodon nigroviridis 69_8 - Spotted green pufferfish
NoYes   Takifugu rubripes 69_4 - Torafugu
NoYes   Gasterosteus aculeatus 69_1 - Three-spined stickleback
NoYes   Oryzias latipes 69_1 - Japanese medaka
NoYes   Xiphophorus maculatus 69_4.4.2 - Southern platyfish
NoYes   Oreochromis niloticus 69_1.0 - Nile tilapia
NoYes   Danio rerio 69_9 - Zebrafish
NoYes   Ciona savignyi 69_2.0 - Pacific transparent sea squirt
NoYes   Ciona intestinalis 69 - Vase tunicate
NoYes   Drosophila melanogaster 69_5 - Fruit fly
NoYes   Caenorhabditis elegans 69_215 - Roundworm
NoYes   Homo sapiens 75_37 - Human
NoYes   Homo sapiens - Human
NoYes   Mus musculus 63_37 (longest transcript per gene) - House mouse
NoYes   Heliconius numata
NoYes   Loa loa v3.3 - Eye worm
NoYes   Wuchereria bancrofti v1.0 - Agent of lymphatic filariasis
NoYes   Brugia malayi v1.0 - Agent of lymphatic filariasis
NoYes   Nicotiana benthamiana 0.4.4
NoYes   NCBI 2017_08 genome
NoYes   STRING v9.0.5 (STRING)
NoYes   Uniprot 2018_03 genome
NoYes   NCBI viral sequences (Viral)
NoYes   PDB chains (SCOP 1.75) (PDB)
NoYes   Protein Data Bank (all PDB sequenc)
NoYes   SCOP2 SCOPe CATH ECOD (all domain sequ)
NoYes   TargetDB (Targets)
NoYes   UniProt viral sequences (Viral)
NoYes   ALL (only advised for small superfamilies)


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