Select to display Genome
No Yes  
Anopheles gambiae 55 (pseudogenes) - African malaria mosquito
No Yes  
Canis familiaris 58 (pseudogenes) - Dog
No Yes  
Danio rerio 58 (pseudogenes) - Zebrafish
No Yes  
Gallus gallus 58 (pseudogene) - Chicken
No Yes  
Homo sapiens 58 (pseudogenes) - Human
No Yes  
Mus musculus 56 (pseudogenes) - House mouse
No Yes  
Pan troglodytes 58 (pseudogenes) - Chimpanzee
No Yes  
Rattus norvegicus 58 (pseudogenes) - Norway rat
No Yes  
Homo sapiens 76_38 - Human
No Yes  
Pan troglodytes 76_2.1.4 - Chimpanzee
No Yes  
Gorilla gorilla 76_3.1 - Western gorilla
No Yes  
Pongo abelii 76_2 - Sumatran orangutan
No Yes  
Tarsius syrichta 76_1
No Yes  
Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbon
No Yes  
Papio anubis 76 - Olive baboon
No Yes  
Macaca mulatta 76_1 - Rhesus monkey
No Yes  
Callithrix jacchus 76_3.2.1 - White-tufted-ear marmoset
No Yes  
Otolemur garnettii 76_3 - Small-eared galago
No Yes  
Microcebus murinus 76_1 - Gray mouse lemur
No Yes  
Rattus norvegicus 76_5.0 - Norway rat
No Yes  
Mus musculus 76_38 - House mouse
No Yes  
Dipodomys ordii 76_1 - Ord's kangaroo rat
No Yes  
Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrel
No Yes  
Heterocephalus glaber v1.7-2 - Naked mole-rat
No Yes  
Cavia porcellus 76_3 - Domestic guinea pig
No Yes  
Oryctolagus cuniculus 76_2 - Rabbit
No Yes  
Ochotona princeps 76 - American pika
No Yes  
Tupaia belangeri 76 - Northern tree shrew
No Yes  
Sus scrofa 76_10.2 - Pig
No Yes  
Bos taurus 76_3.1 - Cattle
No Yes  
Ovis aries 76_3.1 - Sheep
No Yes  
Vicugna pacos 76_1 - Alpaca
No Yes  
Tursiops truncatus 76_1 - Bottlenose dolphin
No Yes  
Mustela putorius furo 76_1.0 - Domestic ferret
No Yes  
Ailuropoda melanoleuca 76_1 - Giant panda
No Yes  
Canis familiaris 76_3.1 - Dog
No Yes  
Felis catus 76_6.2 - Domestic cat
No Yes  
Equus caballus 76_2 - Horse
No Yes  
Myotis lucifugus 76_2.0 - Little brown bat
No Yes  
Pteropus vampyrus 76_1 - Large flying fox
No Yes  
Sorex araneus 76_1 - European shrew
No Yes  
Erinaceus europaeus 76 - Western European hedgehog
No Yes  
Procavia capensis 76_1 - Cape rock hyrax
No Yes  
Loxodonta africana 76_3 - African savanna elephant
No Yes  
Echinops telfairi 76 - Small Madagascar hedgehog
No Yes  
Dasypus novemcinctus 76_2 - Nine-banded armadillo
No Yes  
Choloepus hoffmanni 76_1 - Hoffmann's two-fingered sloth
No Yes  
Macropus eugenii 76_1.0 - Tammar wallaby
No Yes  
Sarcophilus harrisii 76_7.0 - Tasmanian devil
No Yes  
Monodelphis domestica 76_5 - Gray short-tailed opossum
No Yes  
Ornithorhynchus anatinus 76_5 - Platypus
No Yes  
Saccoglossus kowalevskii v3.0
No Yes  
Petromyzon marinus 76_7.0 - Sea lamprey
No Yes  
Meleagris gallopavo 76_2 - Turkey
No Yes  
Gallus gallus 76_4 - Chicken
No Yes  
Anas platyrhynchos 76_1.0 - Mallard
No Yes  
Taeniopygia guttata 76_3.2.4 - Zebra finch
No Yes  
Ficedula albicollis 76_1.0 - Collared flycatcher
No Yes  
Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtle
No Yes  
Anolis carolinensis 76_2.0 - Green anole
No Yes  
Xenopus laevis - African clawed frog
No Yes  
Xenopus tropicalis 76_4.2 - Tropical clawed frog
No Yes  
Latimeria chalumnae 76_1 - Coelacanth
No Yes  
Lepisosteus oculatus 76 - Spotted gar
No Yes  
Gadus morhua 76_1 - Atlantic cod
No Yes  
Tetraodon nigroviridis 76_8 - Spotted green pufferfish
No Yes  
Takifugu rubripes 76_4 - Torafugu
No Yes  
Gasterosteus aculeatus 76_1 - Three-spined stickleback
No Yes  
Oryzias latipes 76_1 - Japanese medaka
No Yes  
Xiphophorus maculatus 76_4.4.2 - Southern platyfish
No Yes  
Poecilia formosa 76 - Amazon molly
No Yes  
Oreochromis niloticus 76_1.0 - Nile tilapia
No Yes  
Astyanax mexicanus 76 - Mexican tetra
No Yes  
Danio rerio 76_9 - Zebrafish
No Yes  
Oikopleura dioica
No Yes  
Ciona savignyi 76_2.0 - Pacific transparent sea squirt
No Yes  
Ciona intestinalis 76 - Vase tunicate
No Yes  
Strongylocentrotus purpuratus v3.1 - Purple sea urchin
No Yes  
Adineta vaga
No Yes  
Octopus bimaculoides 280
No Yes  
Crassostrea gigas 22 - Pacific oyster
No Yes  
Lottia gigantea - Owl limpet
No Yes  
Helobdella robusta
No Yes  
Capitella sp. I
No Yes  
Danaus plexippus OGS1.0 - Monarch butterfly
No Yes  
Heliconius melpomene - Postman butterfly
No Yes  
Bombyx mori - Domestic silkworm
No Yes  
Nasonia vitripennis - Jewel wasp
No Yes  
Apis mellifera 38.2d - Honey bee
No Yes  
Harpegnathos saltator v3.3 - Jerdon's jumping ant
No Yes  
Linepithema humile v1.1 - Argentine ant
No Yes  
Pogonomyrmex barbatus v1.2 - Red harvester ant
No Yes  
Solenopsis invicta v.2.2.3 - Red fire ant
NoYes
Acromyrmex echinatior v3.8 - Panamanian leafcutter ant
No Yes  
Atta cephalotes v1.1
No Yes  
Camponotus floridanus v3.3 - Florida carpenter ant
No Yes  
Lucilia cuprina - Australian sheep blowfly
No Yes  
Drosophila grimshawi 1.3
No Yes  
Drosophila willistoni 1.3
No Yes  
Drosophila pseudoobscura 2.13
No Yes  
Drosophila persimilis 1.3
No Yes  
Drosophila suzukii
No Yes  
Drosophila yakuba 1.3
No Yes  
Drosophila simulans 1.3
No Yes  
Drosophila sechellia 1.3
No Yes  
Drosophila melanogaster 76_5 - Fruit fly
No Yes  
Drosophila erecta 1.3
No Yes  
Drosophila ananassae 1.3
No Yes  
Drosophila virilis 1.2
No Yes  
Drosophila mojavensis 1.3
No Yes  
Megaselia scalaris 22
No Yes  
Aedes aegypti 55 - Yellow fever mosquito
No Yes  
Culex pipiens quinquefasciatus - Southern house mosquito
No Yes  
Anopheles darlingi 22 - American malaria mosquito
No Yes  
Anopheles gambiae 49_3j - African malaria mosquito
No Yes  
Tribolium castaneum 3.0 - Red flour beetle
No Yes  
Pediculus humanus corporis - Human body louse
No Yes  
Acyrthosiphon pisum - Pea aphid
No Yes  
Rhodnius prolixus 22
No Yes  
Daphnia pulex - Common water flea
No Yes  
Strigamia maritima 22
No Yes  
Sarcoptes scabiei
No Yes  
Tetranychus urticae - Two-spotted spider mite
No Yes  
Ixodes scapularis - Black-legged tick
No Yes  
Pristionchus pacificus
No Yes  
Meloidogyne incognita - Southern root-knot nematode
No Yes  
Meloidogyne hapla
No Yes  
Onchocerca volvulus 22
No Yes  
Brugia malayi WS250 - Agent of lymphatic filariasis
No Yes  
Caenorhabditis japonica
No Yes  
Caenorhabditis brenneri
No Yes  
Caenorhabditis remanei
No Yes  
Caenorhabditis elegans 76_235 - Roundworm
No Yes  
Caenorhabditis briggsae 2
No Yes  
Trichinella spiralis 22
No Yes  
Hymenolepis microstoma
No Yes  
Echinococcus multilocularis
No Yes  
Echinococcus granulosus
No Yes  
Taenia solium - Pork tapeworm
No Yes  
Schistosoma mansoni
No Yes  
Mnemiopsis leidyi - Sea walnut
No Yes  
Acropora digitifera v1.0
No Yes  
Nematostella vectensis 1.0 - Starlet sea anemone
No Yes  
Hydra vulgaris
No Yes  
Amphimedon queenslandica
No Yes  
Trichoplax adhaerens
No Yes  
Proterospongia sp. ATCC 50818
No Yes  
Monosiga brevicollis
No Yes  
Capsaspora owczarzaki ATCC 30864
No Yes  
Mortierella verticillata NRRL 6337
No Yes  
Malassezia globosa CBS 7966
No Yes  
Sporisorium reilianum 22
No Yes  
Ustilago maydis
No Yes  
Mixia osmundae IAM 14324 v1.0
No Yes  
Cronartium quercuum f. sp. fusiforme G11 v1.0
No Yes  
Puccinia graminis f. sp. tritici CRL 75-36-700-3
No Yes  
Melampsora laricis-populina
No Yes  
Rhodotorula graminis WP1 v1.0
No Yes  
Microbotryum violaceum 22
No Yes  
Wallemia sebi v1.0
No Yes  
Sphaerobolus stellatus v1.0
No Yes  
Piloderma croceum F 1598 v1.0
No Yes  
Serpula lacrymans var. lacrymans S7.9
No Yes  
Coniophora puteana
No Yes  
Hydnomerulius pinastri v2.0
No Yes  
Paxillus rubicundulus Ve08.2h10 v1.0
No Yes  
Pisolithus microcarpus 441 v1.0
No Yes  
Pisolithus tinctorius Marx 270 v1.0
No Yes  
Scleroderma citrinum Foug A v1.0
No Yes  
Coprinopsis cinerea okayama7 130 v3
No Yes  
Pleurotus ostreatus - Oyster mushroom
No Yes  
Amanita thiersii Skay4041 v1.0
No Yes  
Amanita muscaria Koide v1.0 - Fly agaric
No Yes  
Galerina marginata v1.0
No Yes  
Hebeloma cylindrosporum h7 v2.0
No Yes  
Laccaria bicolor S238N-H82
No Yes  
Agaricus bisporus var. bisporus
No Yes  
Schizophyllum commune
No Yes  
Stereum hirsutum FP-91666 SS1 v1.0
No Yes  
Heterobasidion annosum
No Yes  
Gloeophyllum trabeum v1.0
No Yes  
Punctularia strigosozonata v1.0
No Yes  
Sebacina vermifera MAFF 305830 v1.0
No Yes  
Fomitiporia mediterranea v1.0
No Yes  
Tulasnella calospora AL13/4D v1.0
No Yes  
Postia placenta
No Yes  
Wolfiporia cocos MD-104 SS10 v1.0
No Yes  
Fomitopsis pinicola v1.0
No Yes  
Fomitopsis pinicola FP-58527 SS1 v3.0
No Yes  
Phanerochaete chrysosporium RP-78 2.1
No Yes  
Dichomitus squalens
No Yes  
Trametes versicolor v1.0
No Yes  
Tremella mesenterica - Witches' butter
No Yes  
Daldinia eschscholzii EC12 v1.0
No Yes  
Apiospora montagnei NRRL 25634 v1.0
No Yes  
Magnaporthe poae ATCC 64411 22
No Yes  
Magnaporthe grisea 70-15
No Yes  
Podospora anserina
No Yes  
Thielavia terrestris NRRL 8126
No Yes  
Chaetomium globosum CBS 148.51
No Yes  
Neurospora tetrasperma
No Yes  
Neurospora discreta FGSC 8579
No Yes  
Neurospora crassa OR74A
No Yes  
Cryphonectria parasitica - Chestnut blight fungus
No Yes  
Acremonium alcalophilum v 1.0
No Yes  
Glomerella graminicola 22
No Yes  
Fusarium graminearum
No Yes  
Nectria haematococca mpVI
No Yes  
Fusarium oxysporum f. sp. lycopersici 4286
No Yes  
Fusarium verticillioides 7600
No Yes  
Trichoderma asperellum CBS 433.97 v1.0
No Yes  
Trichoderma atroviride
No Yes  
Trichoderma citrinoviride v1.0
No Yes  
Trichoderma reesei 1.2
No Yes  
Trichoderma virens Gv29-8
No Yes  
Trichoderma longibrachiatum ATCC 18648 v1.0
No Yes  
Trichoderma harzianum CBS 226.95 v1.0
No Yes  
Didymella exigua CBS 183.55 v1.0
No Yes  
Leptosphaeria maculans 22
No Yes  
Pyrenophora teres f. teres 22
No Yes  
Pyrenophora tritici-repentis
No Yes  
Stagonospora nodorum
No Yes  
Zasmidium cellare ATCC 36951 v1.0
No Yes  
Dothistroma septosporum
No Yes  
Septoria musiva v1.0
No Yes  
Aureobasidium pullulans var. subglaciale EXF-2481 v1.0
No Yes  
Aspergillus zonatus v1.0
No Yes  
Penicillium chrysogenum Wisconsin 54-1255
No Yes  
Penicillium chrysogenum v1.0
No Yes  
Aspergillus acidus v1.0
No Yes  
Aspergillus fumigatus Af293
No Yes  
Aspergillus brasiliensis v1.0
No Yes  
Aspergillus nidulans FGSC A4
No Yes  
Aspergillus sydowii v1.0
No Yes  
Aspergillus versicolor v1.0
No Yes  
Aspergillus glaucus
No Yes  
Aspergillus carbonarius ITEM 5010
No Yes  
Neosartorya fischeri NRRL 181
No Yes  
Aspergillus terreus NIH2624
No Yes  
Aspergillus tubingensis v1.0
No Yes  
Aspergillus wentii v1.0
No Yes  
Aspergillus oryzae RIB40
No Yes  
Aspergillus niger 22
No Yes  
Aspergillus niger ATCC 1015
No Yes  
Aspergillus flavus NRRL3357
No Yes  
Aspergillus clavatus NRRL 1
No Yes  
Penicillium marneffei ATCC 18224
No Yes  
Hansenula polymorpha v2.0
No Yes  
Dekkera bruxellensis CBS 2499 v2.0
No Yes  
Pichia membranifaciens v1.0
No Yes  
Candida tanzawaensis NRRL Y-17324 v1.0
No Yes  
Candida dubliniensis CD36
No Yes  
Candida tropicalis MYA-3404
No Yes  
Candida parapsilosis
No Yes  
Candida albicans SC5314
No Yes  
Lodderomyces elongisporus NRRL YB-4239
No Yes  
Babjeviella inositovora NRRL Y-12698 v1.0
No Yes  
Pichia stipitis CBS 6054
No Yes  
Candida guilliermondii ATCC 6260
No Yes  
Hyphopichia burtonii NRRL Y-1933 v1.0
No Yes  
Debaromyces hansenii
No Yes  
Wickerhamomyces anomalus
No Yes  
Pichia pastoris GS115
No Yes  
Hanseniaspora valbyensis NRRL Y-1626 v1.1
No Yes  
Yarrowia lipolytica CLIB122
No Yes  
Candida lusitaniae ATCC 42720
No Yes  
Metschnikowia bicuspidata NRRL YB-4993 v1.0
No Yes  
Vanderwaltozyma polyspora DSM 70294
No Yes  
Candida glabrata CBS138
No Yes  
Kluyveromyces thermotolerans CBS 6340
No Yes  
Lachancea kluyveri
No Yes  
Kluyveromyces waltii
No Yes  
Ashbya gossypii ATCC 10895
No Yes  
Zygosaccharomyces rouxii
No Yes  
Saccharomyces mikatae MIT
No Yes  
Saccharomyces paradoxus MIT
No Yes  
Saccharomyces cerevisiae 76 - Baker's yeast
No Yes  
Saccharomyces bayanus MIT
No Yes  
Kluyveromyces lactis
No Yes  
Allomyces macrogynus ATCC 38327
No Yes  
Spizellomyces punctatus DAOM BR117
No Yes  
Dictyostelium discoideum
No Yes  
Medicago truncatula - Barrel medic
No Yes  
Solanum lycopersicum v.2.3 - Tomato
No Yes  
Ostreococcus sp. RCC809
No Yes  
Ostreococcus lucimarinus CCE9901
No Yes  
Ostreococcus tauri
No Yes  
Micromonas sp. RCC299
No Yes  
Micromonas pusilla CCMP1545 v3.0
No Yes  
Thecamonas trahens ATCC 50062
No Yes  
Albugo laibachii 22
No Yes  
Pythium iwayamai DAOM BR242034 22
No Yes  
Pythium ultimum v1.7-2
No Yes  
Pythium irregulare DAOM BR486 22
No Yes  
Phytophthora infestans T30-4
No Yes  
Tetrahymena thermophila SB210 1
No Yes  
Ichthyophthirius multifiliis strain G5
No Yes  
Symbiodinium minutum clade B1 v1.2
No Yes  
Naegleria gruberi
No Yes  
Trichomonas vaginalis
No Yes  
Guillardia theta CCMP2712 v1.0
No Yes  
Emiliania huxleyi CCMP1516
No Yes  
Leptolyngbya sp. PCC 7376
No Yes  
Pseudanabaena sp. PCC 7367
No Yes  
Synechocystis sp. PCC 6803
No Yes  
Synechococcus sp. PCC 7502
No Yes  
Synechococcus sp. PCC 6312
No Yes  
Microcoleus sp. PCC 7113
No Yes  
Trichodesmium erythraeum IMS101
No Yes  
Halothece sp. PCC 7418
No Yes  
Gloeobacter violaceus PCC 7421
No Yes  
Rivularia sp. PCC 7116
No Yes  
Calothrix sp. PCC 7507
No Yes  
Anabaena variabilis ATCC 29413
No Yes  
Nostoc sp. PCC 7107
No Yes  
Nostoc punctiforme PCC 73102
No Yes  
Nostoc sp. PCC 7120
No Yes  
Nostoc sp. PCC 7524
No Yes  
Anabaena sp. 90
No Yes  
Conexibacter woesei DSM 14684
No Yes  
Eggerthella sp. YY7918
No Yes  
Ilumatobacter coccineus
No Yes  
Kineococcus radiotolerans SRS30216
No Yes  
Catenulispora acidiphila DSM 44928
No Yes  
Frankia alni ACN14a
No Yes  
Streptosporangium roseum DSM 43021
No Yes  
Kitasatospora setae KM-6054
No Yes  
Streptomyces sp. PAMC26508
No Yes  
Streptomyces sp. SirexAA-E
No Yes  
Streptomyces bingchenggensis BCW-1
No Yes  
Streptomyces violaceusniger Tu 4113
No Yes  
Streptomyces avermitilis MA-4680
No Yes  
Streptomyces cattleya NRRL 8057 = DSM 46488
No Yes  
Streptomyces scabiei 87.22
No Yes  
Streptomyces hygroscopicus subsp. jinggangensis 5008
No Yes  
Actinosynnema mirum DSM 43827
No Yes  
Amycolatopsis mediterranei U32
No Yes  
Verrucosispora maris AB-18-032
No Yes  
Micromonospora sp. L5
No Yes  
Micromonospora aurantiaca ATCC 27029
No Yes  
Actinoplanes sp. N902-109
No Yes  
Actinoplanes sp. SE50/110
No Yes  
Actinoplanes missouriensis 431
No Yes  
Rhodococcus erythropolis PR4
No Yes  
Corynebacterium resistens DSM 45100
No Yes  
Corynebacterium glutamicum R
No Yes  
Corynebacterium diphtheriae NCTC 13129
No Yes  
Tropheryma whipplei TW08/27
No Yes  
Microbacterium testaceum StLB037
No Yes  
Intrasporangium calvum DSM 43043
No Yes  
[Cellvibrio] gilvus ATCC 13127
No Yes  
Arthrobacter aurescens TC1
No Yes  
Arthrobacter sp. Rue61a
No Yes  
Arthrobacter sp. FB24
No Yes  
Mobiluncus curtisii ATCC 43063
No Yes  
Caldilinea aerophila DSM 14535 = NBRC 104270
No Yes  
Herpetosiphon aurantiacus DSM 785
No Yes  
Roseiflexus castenholzii DSM 13941
No Yes  
Chloroflexus sp. MS-G
No Yes  
Chloroflexus sp. Y-400-fl
No Yes  
Chloroflexus aggregans DSM 9485
No Yes  
Chloroflexus aurantiacus J-10-fl
No Yes  
Truepera radiovictrix DSM 17093
No Yes  
Deinococcus gobiensis I-0
No Yes  
Deinococcus deserti VCD115
No Yes  
Deinococcus maricopensis DSM 21211
No Yes  
Deinococcus geothermalis DSM 11300
No Yes  
Deinococcus proteolyticus MRP
No Yes  
Deinococcus radiodurans R1
No Yes  
Oceanithermus profundus DSM 14977
No Yes  
Marinithermus hydrothermalis DSM 14884
No Yes  
Meiothermus ruber DSM 1279
No Yes  
Finegoldia magna ATCC 29328
No Yes  
Clostridium clariflavum DSM 19732
No Yes  
Faecalibacterium prausnitzii
No Yes  
Desulfotomaculum reducens MI-1
No Yes  
Acetobacterium woodii DSM 1030
No Yes  
Eubacterium limosum KIST612
No Yes  
Clostridium sticklandii DSM 519
No Yes  
Syntrophomonas wolfei subsp. wolfei str. Goettingen
No Yes  
Heliobacterium modesticaldum Ice1
No Yes  
Alkaliphilus metalliredigens QYMF
No Yes  
Clostridium ljungdahlii DSM 13528
No Yes  
Mahella australiensis 50-1 BON
No Yes  
Caldicellulosiruptor saccharolyticus DSM 8903
No Yes  
Aerococcus urinae ACS-120-V-Col10a
No Yes  
Streptococcus macedonicus ACA-DC 198
No Yes  
Kyrpidia tusciae DSM 2912
No Yes  
Brevibacillus brevis NBRC 100599
No Yes  
Paenibacillus sp. JDR-2
No Yes  
Paenibacillus terrae HPL-003
No Yes  
Paenibacillus mucilaginosus 3016
No Yes  
Paenibacillus polymyxa M1
No Yes  
Bacillus selenitireducens MLS10
No Yes  
Solibacillus silvestris StLB046
No Yes  
Macrococcus caseolyticus JCSC5402
No Yes  
Staphylococcus lugdunensis HKU09-01
No Yes  
Staphylococcus epidermidis RP62A
No Yes  
Staphylococcus aureus subsp. aureus JH1
No Yes  
Staphylococcus aureus
No Yes  
Melioribacter roseus P3M
No Yes  
Pelodictyon phaeoclathratiforme BU-1
No Yes  
Chlorobium luteolum DSM 273
No Yes  
Chlorobium chlorochromatii CaD3
No Yes  
Chlorobium phaeobacteroides DSM 266
No Yes  
Chlorobium limicola DSM 245
No Yes  
Chlorobaculum parvum NCIB 8327
No Yes  
Chloroherpeton thalassium ATCC 35110
No Yes  
Haliscomenobacter hydrossis DSM 1100
No Yes  
Niastella koreensis GR20-10
No Yes  
Chitinophaga pinensis DSM 2588
No Yes  
Salinibacter ruber M8
No Yes  
Rhodothermus marinus DSM 4252
No Yes  
Cyclobacterium marinum DSM 745
No Yes  
Marivirga tractuosa DSM 4126
No Yes  
Fibrella aestuarina
No Yes  
Dyadobacter fermentans DSM 18053
No Yes  
Spirosoma linguale DSM 74
No Yes  
Runella slithyformis DSM 19594
No Yes  
Paludibacter propionicigenes WB4
No Yes  
Bacteroides thetaiotaomicron VPI-5482
No Yes  
Bacteroides fragilis YCH46
No Yes  
Pedobacter saltans DSM 12145
No Yes  
Solitalea canadensis DSM 3403
No Yes  
Pedobacter heparinus DSM 2366
No Yes  
Fluviicola taffensis DSM 16823
No Yes  
Owenweeksia hongkongensis DSM 17368
No Yes  
Gramella forsetii KT0803
No Yes  
Maribacter sp. HTCC2170
No Yes  
Robiginitalea biformata HTCC2501
No Yes  
Aequorivita sublithincola DSM 14238
No Yes  
Zobellia galactanivorans
No Yes  
Muricauda ruestringensis DSM 13258
No Yes  
Flavobacterium indicum GPTSA100-9
No Yes  
Fibrobacter succinogenes subsp. succinogenes S85
No Yes  
Parachlamydia acanthamoebae UV-7
No Yes  
Isosphaera pallida ATCC 43644
No Yes  
Planctomyces brasiliensis DSM 5305
No Yes  
Rhodopirellula baltica SH 1
No Yes  
Pirellula staleyi DSM 6068
No Yes  
Coraliomargarita akajimensis DSM 45221
No Yes  
Opitutus terrae PB90-1
No Yes  
Turneriella parva DSM 21527
No Yes  
Leptospira borgpetersenii serovar Hardjo-bovis str. L550
No Yes  
Leptospira interrogans serovar Lai str. IPAV
No Yes  
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'
No Yes  
Treponema azotonutricium ZAS-9
No Yes  
Denitrovibrio acetiphilus DSM 12809
No Yes  
Fervidobacterium pennivorans DSM 9078
No Yes  
Candidatus Chloracidobacterium thermophilum B
No Yes  
Candidatus Solibacter usitatus Ellin6076
No Yes  
Granulicella tundricola MP5ACTX9
No Yes  
Granulicella mallensis MP5ACTX8
No Yes  
Candidatus Koribacter versatilis Ellin345
No Yes  
Terriglobus saanensis SP1PR4
No Yes  
Terriglobus roseus DSM 18391
No Yes  
Acidobacterium capsulatum ATCC 51196
No Yes  
Candidatus Nitrospira defluvii
No Yes  
Candidatus Methylomirabilis oxyfera
No Yes  
Bacteriovorax marinus SJ
No Yes  
Bdellovibrio bacteriovorus HD100
No Yes  
Arcobacter sp. L
No Yes  
Arcobacter nitrofigilis DSM 7299
No Yes  
Arcobacter butzleri RM4018
No Yes  
Sulfurimonas denitrificans DSM 1251
No Yes  
Syntrophus aciditrophicus SB
No Yes  
Desulfomonile tiedjei DSM 6799
No Yes  
Desulfotalea psychrophila LSv54
No Yes  
Desulfatibacillum alkenivorans AK-01
No Yes  
Desulfococcus oleovorans Hxd3
No Yes  
Desulfovibrio piezophilus
No Yes  
Desulfovibrio aespoeensis Aspo-2
No Yes  
Geobacter daltonii FRC-32
No Yes  
Geobacter sp. M21
No Yes  
Geobacter uraniireducens Rf4
No Yes  
Geobacter bemidjiensis Bem
No Yes  
Geobacter sulfurreducens KN400
No Yes  
Geobacter metallireducens GS-15
No Yes  
Pelobacter propionicus DSM 2379
No Yes  
Stigmatella aurantiaca DW4/3-1
No Yes  
Corallococcus coralloides DSM 2259
No Yes  
Myxococcus xanthus DK 1622
No Yes  
Myxococcus fulvus HW-1
No Yes  
Azoarcus sp. BH72
No Yes  
Aromatoleum aromaticum EbN1
No Yes  
Dechlorosoma suillum PS
No Yes  
Pseudogulbenkiania sp. NH8B
No Yes  
Chromobacterium violaceum ATCC 12472
No Yes  
Candidatus Accumulibacter phosphatis clade IIA str. UW-1
No Yes  
beta proteobacterium CB
No Yes  
Rubrivivax gelatinosus IL144
No Yes  
Leptothrix cholodnii SP-6
No Yes  
Cupriavidus metallidurans CH34
No Yes  
Cupriavidus necator N-1
No Yes  
Ralstonia solanacearum CFBP2957
No Yes  
Burkholderia gladioli BSR3
No Yes  
Burkholderia glumae BGR1
No Yes  
Alicycliphilus denitrificans K601
No Yes  
Ramlibacter tataouinensis TTB310
No Yes  
Delftia sp. Cs1-4
No Yes  
Delftia acidovorans SPH-1
No Yes  
Variovorax paradoxus S110
No Yes  
Rhodoferax ferrireducens T118
No Yes  
Acidovorax avenae subsp. avenae ATCC 19860
No Yes  
Comamonas testosteroni CNB-2
No Yes  
Collimonas fungivorans Ter331
No Yes  
Bordetella parapertussis 12822
No Yes  
Bordetella bronchiseptica RB50
No Yes  
Achromobacter xylosoxidans A8
No Yes  
Nitrosomonas sp. Is79A3
No Yes  
Sideroxydans lithotrophicus ES-1
No Yes  
Gallionella capsiferriformans ES-2
No Yes  
Methylotenera versatilis 301
No Yes  
Magnetococcus marinus MC-1
No Yes  
Parvularcula bermudensis HTCC2503
No Yes  
Brevundimonas subvibrioides ATCC 15264
No Yes  
Caulobacter sp. K31
No Yes  
Sphingopyxis alaskensis RB2256
No Yes  
Novosphingobium aromaticivorans DSM 12444
No Yes  
Sphingobium japonicum UT26S
No Yes  
Sphingobium chlorophenolicum L-1
No Yes  
Maricaulis maris MCS10
No Yes  
Hyphomonas neptunium ATCC 15444
No Yes  
Dinoroseobacter shibae DFL 12
No Yes  
Pseudovibrio sp. FO-BEG1
No Yes  
Rhodobacter sphaeroides ATCC 17029
No Yes  
Rhodospirillum photometricum DSM 122
No Yes  
Tistrella mobilis KA081020-065
No Yes  
Magnetospirillum magneticum AMB-1
No Yes  
Rhodospirillum centenum SW
No Yes  
Azospirillum lipoferum 4B
No Yes  
Azospirillum sp. B510
No Yes  
Azospirillum brasilense Sp245
No Yes  
Micavibrio aeruginosavorus ARL-13
No Yes  
Candidatus Puniceispirillum marinum IMCC1322
No Yes  
Methylobacterium extorquens AM1
No Yes  
Sinorhizobium meliloti AK83
No Yes  
Genome sequence of Rhizobium sp. strain IRBG74
No Yes  
Rhizobium etli CIAT 652
No Yes  
Rhizobium leguminosarum bv. viciae 3841
No Yes  
Agrobacterium tumefaciens str. C58
No Yes  
Agrobacterium sp. H13-3
No Yes  
Agrobacterium vitis S4
No Yes  
Hyphomicrobium sp. MC1
No Yes  
Nitrobacter hamburgensis X14
No Yes  
Bradyrhizobium japonicum USDA 110
No Yes  
Saccharophagus degradans 2-40
No Yes  
Teredinibacter turnerae T7901
No Yes  
Cellvibrio japonicus Ueda107
No Yes  
Oceanimonas sp. GK1
No Yes  
Aliivibrio salmonicida LFI1238
No Yes  
Vibrio fischeri MJ11
No Yes  
Vibrio sp. Ex25
No Yes  
Vibrio parahaemolyticus RIMD 2210633
No Yes  
Vibrio furnissii NCTC 11218
No Yes  
Vibrio vulnificus MO6-24/O
No Yes  
Vibrio cholerae O395
No Yes  
Psychromonas ingrahamii 37
No Yes  
Ferrimonas balearica DSM 9799
No Yes  
Shewanella piezotolerans WP3
No Yes  
Shewanella loihica PV-4
No Yes  
Shewanella halifaxensis HAW-EB4
No Yes  
Shewanella denitrificans OS217
No Yes  
Shewanella pealeana ATCC 700345
No Yes  
Shewanella oneidensis MR-1
No Yes  
Shewanella baltica OS185
No Yes  
Shewanella woodyi ATCC 51908
No Yes  
Shewanella amazonensis SB2B
No Yes  
Shewanella violacea DSS12
No Yes  
Shewanella frigidimarina NCIMB 400
No Yes  
Shewanella putrefaciens CN-32
No Yes  
Colwellia psychrerythraea 34H
No Yes  
Pseudoalteromonas atlantica T6c
No Yes  
Pseudoalteromonas haloplanktis TAC125
No Yes  
Glaciecola sp. 4H-3-7+YE-5
No Yes  
Marinobacter adhaerens HP15
No Yes  
Marinobacter hydrocarbonoclasticus ATCC 49840
No Yes  
Alteromonas macleodii str. 'Deep ecotype'
No Yes  
Kangiella koreensis DSM 16069
No Yes  
Hahella chejuensis KCTC 2396
No Yes  
Marinomonas posidonica IVIA-Po-181
No Yes  
Marinomonas sp. MWYL1
No Yes  
Marinomonas mediterranea MMB-1
No Yes  
Methylomonas methanica MC09
No Yes  
Rhodanobacter denitrificans
No Yes  
Xanthomonas axonopodis pv. citri str. 306
No Yes  
Xanthomonas oryzae pv. oryzae PXO99A
No Yes  
Xanthomonas campestris pv. campestris str. B100
No Yes  
Allochromatium vinosum DSM 180
No Yes  
Thiocystis violascens DSM 198
No Yes  
Nitrosococcus watsonii C-113
No Yes  
gamma proteobacterium HdN1
No Yes  
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)
No Yes  
Dickeya dadantii Ech703
No Yes  
Dickeya zeae Ech1591
No Yes  
Pectobacterium wasabiae WPP163
No Yes  
Pectobacterium sp. SCC3193
No Yes  
Pectobacterium atrosepticum SCRI1043
No Yes  
Pectobacterium carotovorum subsp. carotovorum PC1
No Yes  
Pantoea sp. At-9b
No Yes  
Cronobacter turicensis z3032
No Yes  
Pseudomonas sp. UW4
No Yes  
Pseudomonas brassicacearum subsp. brassicacearum NFM421
No Yes  
Pseudomonas syringae pv. tomato str. DC3000
No Yes  
Pseudomonas protegens Pf-5
No Yes  
Pseudomonas sp. VLB120
No Yes  
Psychrobacter sp. PRwf-1
No Yes  
Acinetobacter baumannii ATCC 17978
No Yes  
Methylophaga sp. JAM1
No Yes  
Thioalkalimicrobium cyclicum ALM1
No Yes  
Cenarchaeum symbiosum A
No Yes  
Candidatus Nitrosopumilus sp. AR2
No Yes  
Nitrosopumilus maritimus SCM1
No Yes  
Candidatus Korarchaeum cryptofilum OPF8
No Yes  
Methanocella arvoryzae MRE50
No Yes  
Methanococcoides burtonii DSM 6242
No Yes  
Methanosarcina acetivorans C2A
No Yes  
Methanosarcina mazei Go1
No Yes  
Methanosarcina barkeri str. Fusaro
No Yes  
Thermoplasmatales archaeon BRNA1
No Yes  
Methanobacterium sp. AL-21
No Yes  
Haloquadratum walsbyi DSM 16790
No Yes  
Haloferax volcanii DS2
No Yes  
Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frog
No Yes  
Drosophila melanogaster FlyBase 5.12 - Fruit fly
No Yes  
Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquito
No Yes  
Ascaris suum Victoria/Ghent - Pig roundworm
No Yes  
Caenorhabditis elegans WormBase WS218 - Roundworm
No Yes  
Cryptococcus neoformans var. grubii H99
No Yes  
Cryptococcus neoformans B-3501A
No Yes  
Cryptococcus neoformans JEC21
No Yes  
Aspergillus fumigatus A1163
No Yes  
Candida albicans WO-1
No Yes  
Saccharomyces cerevisiae UC5
No Yes  
Saccharomyces cerevisiae PW5
No Yes  
Saccharomyces cerevisiae CLIB324
No Yes  
Saccharomyces cerevisiae CBS7960
No Yes  
Saccharomyces cerevisiae T7
No Yes  
Saccharomyces cerevisiae FostersB
No Yes  
Saccharomyces cerevisiae FostersO
No Yes  
Saccharomyces cerevisiae VL3
No Yes  
Saccharomyces cerevisiae Vin13
No Yes  
Saccharomyces cerevisiae LalvinQA23
No Yes  
Saccharomyces cerevisiae Sigma1278b
No Yes  
Saccharomyces cerevisiae W303
No Yes  
Saccharomyces cerevisiae JAY291
No Yes  
Saccharomyces cerevisiae AWRI1631
No Yes  
Saccharomyces cerevisiae YPS163
No Yes  
Saccharomyces cerevisiae T73
No Yes  
Saccharomyces cerevisiae Y10
No Yes  
Saccharomyces cerevisiae YJM789
No Yes  
Saccharomyces cerevisiae YJM789
No Yes  
Saccharomyces cerevisiae RM11-1a
No Yes  
Saccharomyces cerevisiae RM11-1a
No Yes  
Saccharomyces cerevisiae SGD - Baker's yeast
No Yes  
Synechocystis sp. PCC 6803 substr. PCC-P
No Yes  
Synechocystis sp. PCC 6803 substr. PCC-N
No Yes  
Synechocystis sp. PCC 6803 substr. GT-I
No Yes  
Synechocystis sp. PCC 6803
No Yes  
Dactylococcopsis salina PCC 8305
No Yes  
Prochlorococcus marinus str. AS9601
No Yes  
Oscillatoria nigro-viridis PCC 7112
No Yes  
Oscillatoria acuminata PCC 6304
No Yes  
Arthrospira platensis NIES-39
No Yes  
Cyanothece sp. PCC 7822
No Yes  
Cyanothece sp. ATCC 51142
No Yes  
Gloeobacter kilaueensis Gloeobacter sp. JS
No Yes  
Calothrix parietina Calothrix sp. PCC 6303
No Yes  
Cylindrospermum stagnale PCC 7417
No Yes  
Anabaena cylindrica PCC 7122
No Yes  
Frankia sp. EuI1c
No Yes  
Streptomyces rapamycinicus NRRL 5491
No Yes  
Streptomyces collinus Tu 365
No Yes  
Streptomyces cattleya NRRL 8057 = DSM 46488
No Yes  
Streptomyces hygroscopicus subsp. jinggangensis TL01
No Yes  
Saccharothrix espanaensis DSM 44229
No Yes  
Amycolatopsis mediterranei RB
No Yes  
Amycolatopsis mediterranei S699
No Yes  
Amycolatopsis mediterranei S699
No Yes  
Actinoplanes friuliensis DSM 7358
No Yes  
Rhodococcus erythropolis CCM2595
No Yes  
Mycobacterium gilvum Spyr1
No Yes  
Corynebacterium callunae DSM 20147
No Yes  
Corynebacterium glutamicum SCgG2
No Yes  
Corynebacterium glutamicum SCgG1
No Yes  
Corynebacterium glutamicum ATCC 13032
No Yes  
Corynebacterium glutamicum ATCC 13032
No Yes  
Corynebacterium glutamicum ATCC 13032
No Yes  
Corynebacterium diphtheriae BH8
No Yes  
Corynebacterium diphtheriae INCA 402
No Yes  
Corynebacterium diphtheriae VA01
No Yes  
Corynebacterium diphtheriae HC04
No Yes  
Corynebacterium diphtheriae HC03
No Yes  
Corynebacterium diphtheriae HC02
No Yes  
Corynebacterium diphtheriae HC01
No Yes  
Corynebacterium diphtheriae 241
No Yes  
Corynebacterium diphtheriae CDCE 8392
No Yes  
Corynebacterium diphtheriae C7 (beta)
No Yes  
Corynebacterium diphtheriae 31A
No Yes  
Tropheryma whipplei str. Twist
No Yes  
Leifsonia xyli subsp. cynodontis DSM 46306
No Yes  
Deinococcus peraridilitoris DSM 19664
No Yes  
[Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532
No Yes  
Desulfitobacterium dichloroeliminans LMG P-21439
No Yes  
Desulfotomaculum gibsoniae DSM 7213
No Yes  
Clostridium autoethanogenum DSM 10061
No Yes  
Lactobacillus reuteri JCM 1112
No Yes  
Lactobacillus acidophilus NCFM
No Yes  
Streptococcus agalactiae 09mas018883
No Yes  
Paenibacillus sp. Y412MC10
No Yes  
Paenibacillus mucilaginosus KNP414
No Yes  
Paenibacillus mucilaginosus K02
No Yes  
Paenibacillus polymyxa SC2
No Yes  
Bacillus infantis NRRL B-14911
No Yes  
Bacillus megaterium WSH-002
No Yes  
Staphylococcus aureus subsp. aureus MSHR1132
No Yes  
Staphylococcus pasteuri SP1
No Yes  
Staphylococcus lugdunensis N920143
No Yes  
Staphylococcus warneri SG1
No Yes  
Staphylococcus aureus CA-347
No Yes  
Staphylococcus aureus Bmb9393
No Yes  
Staphylococcus aureus M1
No Yes  
Staphylococcus aureus 08BA02176
No Yes  
Staphylococcus aureus ST228/18412
No Yes  
Staphylococcus aureus ST228/18341
No Yes  
Staphylococcus aureus ST228/16125
No Yes  
Staphylococcus aureus ST228/16035
No Yes  
Staphylococcus aureus ST228/15532
No Yes  
Staphylococcus aureus ST228/10497
No Yes  
Staphylococcus aureus ST228/10388
No Yes  
Staphylococcus aureus 04-02981
No Yes  
Staphylococcus aureus subsp. aureus Z172
No Yes  
Staphylococcus aureus subsp. aureus 6850
No Yes  
Staphylococcus aureus subsp. aureus SA957
No Yes  
Staphylococcus aureus subsp. aureus CN1
No Yes  
Staphylococcus aureus subsp. aureus SA40
No Yes  
Staphylococcus aureus subsp. aureus 11819-97
No Yes  
Staphylococcus aureus subsp. aureus M013
No Yes  
Staphylococcus aureus subsp. aureus VC40
No Yes  
Staphylococcus aureus subsp. aureus T0131
No Yes  
Staphylococcus aureus subsp. aureus LGA251
No Yes  
Staphylococcus aureus subsp. aureus ECT-R 2
No Yes  
Staphylococcus aureus subsp. aureus JKD6159
No Yes  
Staphylococcus aureus subsp. aureus ED133
No Yes  
Staphylococcus aureus subsp. aureus ED98
No Yes  
Staphylococcus aureus subsp. aureus TW20
No Yes  
Staphylococcus aureus subsp. aureus 55/2053
No Yes  
Staphylococcus aureus subsp. aureus TCH60
No Yes  
Staphylococcus aureus subsp. aureus str. JKD6008
No Yes  
Staphylococcus aureus subsp. aureus 71193
No Yes  
Staphylococcus aureus subsp. aureus S0385
No Yes  
Staphylococcus aureus subsp. aureus str. Newman
No Yes  
Staphylococcus aureus subsp. aureus Mu3
No Yes  
Staphylococcus aureus subsp. aureus USA300_TCH1516
No Yes  
Staphylococcus aureus subsp. aureus USA300_FPR3757
No Yes  
Staphylococcus aureus subsp. aureus JH9
No Yes  
Staphylococcus aureus subsp. aureus MSSA476
No Yes  
Staphylococcus aureus subsp. aureus MRSA252
No Yes  
Staphylococcus aureus subsp. aureus MW2
No Yes  
Staphylococcus aureus subsp. aureus N315
No Yes  
Staphylococcus aureus subsp. aureus Mu50
No Yes  
Staphylococcus aureus subsp. aureus COL
No Yes  
Staphylococcus aureus subsp. aureus NCTC 8325
No Yes  
Salinibacter ruber DSM 13855
No Yes  
Rhodothermus marinus SG0.5JP17-172
No Yes  
Emticicia oligotrophica DSM 17448
No Yes  
Bacteroides fragilis 638R
No Yes  
Bacteroides fragilis NCTC 9343
No Yes  
Fibrobacter succinogenes subsp. succinogenes S85
No Yes  
Chlamydia trachomatis J/6276tet1
No Yes  
Chlamydia trachomatis RC-J(s)/122
No Yes  
Chlamydia trachomatis RC-F(s)/342
No Yes  
Chlamydia trachomatis RC-Fs852
No Yes  
Singulisphaera acidiphila DSM 18658
No Yes  
Leptospira borgpetersenii serovar Hardjo-bovis str. JB197
No Yes  
Leptospira interrogans serovar Lai str. 56601
No Yes  
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
No Yes  
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'
No Yes  
Bdellovibrio bacteriovorus str. Tiberius
No Yes  
Arcobacter butzleri ED-1
No Yes  
Desulfocapsa sulfexigens DSM 10523
No Yes  
Desulfobacula toluolica Tol2
No Yes  
Geobacter sp. M18
No Yes  
Geobacter sulfurreducens PCA
No Yes  
Anaeromyxobacter sp. K
No Yes  
Myxococcus stipitatus DSM 14675
No Yes  
Ralstonia pickettii 12J
No Yes  
Ralstonia solanacearum FQY_4
No Yes  
Ralstonia solanacearum Po82
No Yes  
Ralstonia solanacearum PSI07
No Yes  
Ralstonia solanacearum CMR15
No Yes  
Ralstonia solanacearum GMI1000
No Yes  
Burkholderia sp. CCGE1003
No Yes  
Burkholderia sp. KJ006
No Yes  
Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR
No Yes  
Alicycliphilus denitrificans BC
No Yes  
Variovorax paradoxus B4
No Yes  
Bordetella parapertussis Bpp5
No Yes  
Bordetella bronchiseptica MO149
No Yes  
Bordetella bronchiseptica 253
No Yes  
Phaeobacter gallaeciensis DSM 26640
No Yes  
Rhodobacter sphaeroides KD131
No Yes  
Rhodobacter sphaeroides ATCC 17025
No Yes  
Magnetospirillum gryphiswaldense MSR-1 v2
No Yes  
Rhizobium etli CFN 42
No Yes  
Rhizobium etli bv. mimosae str. Mim1
No Yes  
Rhizobium leguminosarum bv. trifolii WSM2304
No Yes  
Rhizobium leguminosarum bv. trifolii WSM1325
No Yes  
Rhodopseudomonas palustris HaA2
No Yes  
Bradyrhizobium oligotrophicum S58
No Yes  
Bradyrhizobium japonicum USDA 6
No Yes  
Simiduia agarivorans SA1 = DSM 21679
No Yes  
Vibrio fischeri ES114
No Yes  
Vibrio sp. EJY3
No Yes  
Vibrio alginolyticus NBRC 15630 = ATCC 17749
No Yes  
Vibrio nigripulchritudo VibrioScope
No Yes  
Vibrio cholerae M66-2
No Yes  
Vibrio cholerae O395
No Yes  
Vibrio cholerae O1 str. 2010EL-1786
No Yes  
Vibrio cholerae MJ-1236
No Yes  
Shewanella sp. W3-18-1
No Yes  
Shewanella sp. ANA-3
No Yes  
Shewanella baltica BA175
No Yes  
Shewanella baltica OS678
No Yes  
Shewanella baltica OS117
No Yes  
Shewanella baltica OS223
No Yes  
Shewanella baltica OS195
No Yes  
Shewanella baltica OS155
No Yes  
Shewanella putrefaciens 200
No Yes  
Glaciecola psychrophila 170
No Yes  
Alteromonas macleodii str. 'Ionian Sea UM4b'
No Yes  
Alteromonas macleodii str. 'Ionian Sea UM7'
No Yes  
Alteromonas macleodii str. 'English Channel 615'
No Yes  
Alteromonas macleodii AltDE1
No Yes  
Alteromonas macleodii str. 'Black Sea 11'
No Yes  
Alteromonas macleodii ATCC 27126
No Yes  
Thalassolituus oleivorans MIL-1
No Yes  
Stenotrophomonas maltophilia JV3
No Yes  
Xanthomonas citri subsp. citri Aw12879
No Yes  
Xanthomonas campestris pv. vesicatoria str. 85-10
No Yes  
Xanthomonas axonopodis pv. citrumelo F1
No Yes  
Xanthomonas axonopodis Xac29-1
No Yes  
Xanthomonas oryzae pv. oryzae MAFF 311018
No Yes  
Xanthomonas oryzae pv. oryzae KACC 10331
No Yes  
Xanthomonas campestris pv. raphani 756C
No Yes  
Xanthomonas campestris pv. campestris str. 8004
No Yes  
Xanthomonas campestris pv. campestris str. ATCC 33913
No Yes  
Dickeya dadantii Ech586
No Yes  
Dickeya dadantii 3937
No Yes  
Pectobacterium carotovorum subsp. carotovorum PCC21
No Yes  
Cronobacter sakazakii CMCC 45402
No Yes  
Cronobacter sakazakii SP291
No Yes  
Cronobacter sakazakii ATCC BAA-894
No Yes  
Pseudomonas denitrificans ATCC 13867
No Yes  
Pseudomonas syringae pv. phaseolicola 1448A
No Yes  
Pseudomonas syringae pv. syringae B728a
No Yes  
Pseudomonas protegens CHA0
No Yes  
Pseudomonas fluorescens F113
No Yes  
Pseudomonas resinovorans NBRC 106553
No Yes  
Pseudomonas mendocina NK-01
No Yes  
Acinetobacter baumannii ATCC 19606
No Yes  
Methylophaga sp. JAM7
No Yes  
Candidatus Nitrososphaera gargensis Ga9.2
No Yes  
Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1
No Yes  
Methanomethylovorans hollandica DSM 15978
No Yes  
Methanolobus psychrophilus R15
No Yes  
Methanosarcina mazei Tuc01
No Yes  
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
No Yes  
Haloquadratum walsbyi C23
No Yes  
Natronomonas moolapensis 8.8.11
No Yes  
Homo sapiens 69_37 - Human
No Yes  
Pan troglodytes 69_2.1.4 - Chimpanzee
No Yes  
Gorilla gorilla 69_3.1 - Western gorilla
No Yes  
Pongo abelii 69_2 - Sumatran orangutan
No Yes  
Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbon
No Yes  
Macaca mulatta 69_1 - Rhesus monkey
No Yes  
Callithrix jacchus 69_3.2.1 - White-tufted-ear marmoset
No Yes  
Otolemur garnettii 69_3 - Small-eared galago
No Yes  
Tarsius syrichta 69_1
No Yes  
Microcebus murinus 69_1 - Gray mouse lemur
No Yes  
Rattus norvegicus 69_3.4 - Norway rat
No Yes  
Mus musculus 69_38 - House mouse
No Yes  
Dipodomys ordii 69_1 - Ord's kangaroo rat
No Yes  
Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrel
No Yes  
Cavia porcellus 69_3 - Domestic guinea pig
No Yes  
Oryctolagus cuniculus 69_2 - Rabbit
No Yes  
Ochotona princeps 69 - American pika
No Yes  
Tupaia belangeri 69 - Northern tree shrew
No Yes  
Sus scrofa 69_10.2 - Pig
No Yes  
Bos taurus 69_3.1 - Cattle
No Yes  
Vicugna pacos 69_1 - Alpaca
No Yes  
Tursiops truncatus 69_1 - Bottlenose dolphin
No Yes  
Mustela putorius furo 69_1.0 - Domestic ferret
No Yes  
Ailuropoda melanoleuca 69_1 - Giant panda
No Yes  
Canis familiaris 69_3.1 - Dog
No Yes  
Felis catus 69 - Domestic cat
No Yes  
Equus caballus 69_2 - Horse
No Yes  
Myotis lucifugus 69_2.0 - Little brown bat
No Yes  
Pteropus vampyrus 69_1 - Large flying fox
No Yes  
Sorex araneus 69_1 - European shrew
No Yes  
Erinaceus europaeus 69 - Western European hedgehog
No Yes  
Procavia capensis 69_1 - Cape rock hyrax
No Yes  
Loxodonta africana 69_3 - African savanna elephant
No Yes  
Echinops telfairi 69 - Small Madagascar hedgehog
No Yes  
Dasypus novemcinctus 69_2 - Nine-banded armadillo
No Yes  
Choloepus hoffmanni 69_1 - Hoffmann's two-fingered sloth
No Yes  
Macropus eugenii 69_1.0 - Tammar wallaby
No Yes  
Sarcophilus harrisii 69_7.0 - Tasmanian devil
No Yes  
Monodelphis domestica 69_5 - Gray short-tailed opossum
No Yes  
Ornithorhynchus anatinus 69_5 - Platypus
No Yes  
Petromyzon marinus 69_7.0 - Sea lamprey
No Yes  
Meleagris gallopavo 69_2 - Turkey
No Yes  
Gallus gallus 69_2 - Chicken
No Yes  
Taeniopygia guttata 69_3.2.4 - Zebra finch
No Yes  
Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtle
No Yes  
Anolis carolinensis 69_2.0 - Green anole
No Yes  
Xenopus tropicalis 69_4.2 - Tropical clawed frog
No Yes  
Latimeria chalumnae 69_1 - Coelacanth
No Yes  
Gadus morhua 69_1 - Atlantic cod
No Yes  
Tetraodon nigroviridis 69_8 - Spotted green pufferfish
No Yes  
Takifugu rubripes 69_4 - Torafugu
No Yes  
Gasterosteus aculeatus 69_1 - Three-spined stickleback
No Yes  
Oryzias latipes 69_1 - Japanese medaka
No Yes  
Xiphophorus maculatus 69_4.4.2 - Southern platyfish
No Yes  
Oreochromis niloticus 69_1.0 - Nile tilapia
No Yes  
Danio rerio 69_9 - Zebrafish
No Yes  
Ciona savignyi 69_2.0 - Pacific transparent sea squirt
No Yes  
Ciona intestinalis 69 - Vase tunicate
No Yes  
Drosophila melanogaster 69_5 - Fruit fly
No Yes  
Caenorhabditis elegans 69_215 - Roundworm
No Yes  
Saccharomyces cerevisiae 69_4 - Baker's yeast
No Yes  
Homo sapiens 75_37 - Human
No Yes  
Homo sapiens - Human
No Yes  
Mus musculus 63_37 (longest transcript per gene) - House mouse
No Yes  
Heliconius numata
No Yes  
Loa loa v3.3 - Eye worm
No Yes  
Wuchereria bancrofti v1.0 - Agent of lymphatic filariasis
No Yes  
Brugia malayi v1.0 - Agent of lymphatic filariasis
No Yes  
Ricinus communis - Castor bean
No Yes  
Solanum pimpinellifolium A-1.0 - Currant tomato
No Yes  
Solanum lycopersicum v2.3 - Tomato
No Yes  
1_Upper_euphotic (meta-genome)
No Yes  
2_050719S (meta-genome)
No Yes  
2_Base_of_chrolophyll_max (meta-genome)
No Yes  
3_050719R (meta-genome)
No Yes  
3_Below_base_of_euphotic (meta-genome)
No Yes  
4_050719Q (meta-genome)
No Yes  
4_Deep_abyss (meta-genome)
No Yes  
5_050719P (meta-genome)
No Yes  
5_Below_upper_mesopelagic (meta-genome)
No Yes  
6_Upper_euphotic (meta-genome)
No Yes  
7_Oxygen_minimum_layer (meta-genome)
No Yes  
Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)
No Yes  
Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)
No Yes  
Air microbial communities Singapore indoor air filters 1 (meta-genome)
No Yes  
Air microbial communities Singapore indoor air filters 2 (meta-genome)
No Yes  
Atta cephalotes fungus garden (ACEF) (meta-genome)
No Yes  
Bath Hot Springs, planktonic community (meta-genome)
No Yes  
Combined (meta-genome)
No Yes  
Cyphomyrmex longiscapus fungus garden (meta-genome)
No Yes  
Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)
No Yes  
Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)
No Yes  
Dump bottom (Dump bottom) (meta-genome)
No Yes  
Dump top (Dump top) (meta-genome)
No Yes  
Endophytic microbiome from Rice (meta-genome)
No Yes  
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)
No Yes  
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)
No Yes  
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)
No Yes  
Freshwater propionate enrichment of Brocadia fulgida (meta-genome)
No Yes  
Fungus garden combined (combined) (meta-genome)
No Yes  
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)
No Yes  
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)
No Yes  
Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes
No Yes  
Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)
No Yes  
Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids (meta-genome)
No Yes  
Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)
No Yes  
Human Gut Community Subject 7 (meta-genome)
No Yes  
Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)
No Yes  
Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)
No Yes  
Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)
No Yes  
Marine anammox bioreactor enriched for Scalindua species (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)
No Yes  
Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)
No Yes  
Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)
No Yes  
Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)
No Yes  
Mouse Gut Community ob1 (meta-genome)
No Yes  
NCBI 2017_08 genome
No Yes  
Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)
No Yes  
Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)
No Yes  
Protozoadb 2010_08 (Protozoadb)
No Yes  
simHC - Simulated High Complexity Metagenome (meta-genome)
No Yes  
simLC - Simulated Low Complexity Metagenome (meta-genome)
No Yes  
simMC - Simulated Medium Complexity Metagenome (meta-genome)
No Yes  
Single-cell genome from subgingival tooth surface TM7a (meta-genome)
No Yes  
Single-cell genome from subgingival tooth surface TM7c (meta-genome)
No Yes  
Sludge/Australian, Phrap Assembly (meta-genome)
No Yes  
Sludge/US, Jazz Assembly (meta-genome)
No Yes  
Sludge/US, Phrap Assembly (meta-genome)
No Yes  
Soil microbial communities from Minnesota Farm (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)
No Yes  
Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)
No Yes  
STRING v9.0.5 (STRING)
No Yes  
Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)
No Yes  
Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)
No Yes  
Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)
No Yes  
Termite Protist Endosymbiont Community (meta-genome)
No Yes  
Uniprot 2018_03 genome
No Yes  
Uranium Contaminated Groundwater FW106 (meta-genome)
No Yes  
Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)
No Yes  
Global Ocean Sampling Expedition (GOS)
No Yes  
NCBI plasmid sequences (Plasmids)
No Yes  
NCBI viral sequences (Viral)
No Yes  
PDB chains (SCOP 1.75 ) (PDB)
No Yes  
Protein Data Bank (all PDB sequenc)
No Yes  
SCOP2 SCOPe CATH ECOD (all domain sequ)
No Yes  
TargetDB (Targets)
No Yes
ALL (only advised for small superfamilies)