SUPERFAMILY 1.75 HMM library and genome assignments server

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Hemopexin-like domain alignments in Mus musculus 76_38

These alignments are sequences aligned to the 0046971 model.

Sophisticated options are available for refining alignments:


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Alignments

The numbers along the top are the segment numbers of the HMM states, and each sequence is seperately aligned to the model.
The first sequence is the seed the model was built from.
Upper case letters are aligned, lower case letters are insertions, '-' signifies a deletion and '.' is nothing.

                                                   10        20         30          40         50   
                                                    |         |          |           |          |   
d1gena_               ....................l-GPVTPEICKQDIVFDGIAQI.RGEIFFFKDRFIWRT..VTPRDKPM.GPLLVATFW
ENSMUSP00000029881  ...................pg---AKPNICDGN--FNTLAIL.RREMFVFKDQWFWRV..RNNRVMDG.YPMQITYFW
ENSMUSP00000087119  ....................y----GPNICDGN--FDTVAML.RGEMFVFKERWFWRV..RNNQVMDG.YPMPIGQFW
ENSMUSP00000034187  ....................g--PVTPEICKQDIVFDGIAQI.RGEIFFFKDRFIWRT..VTPRDKPT.GPLLVATFW
ENSMUSP00000034497  ...................et-----SPMCSSTLFFDAVSTL.RGEVLFFKDRHFWRK..SLRTPEP-.EFYLISSFW
ENSMUSP00000034243  .....................PDQYGPNICDGN--FDTVAVL.RGEMFVFKGRWFWRV..RHNRVLDN.YPMPIGHFW
ENSMUSP00000029141  ...................pg---AKPNICDGN--FNTVALF.RGEMFVFKDRWFWRL..RNNRVQEG.YPMQIEQFW
ENSMUSP00000015394  ....................p---KTPEKCDPALSLDAITSL.RGETMIFKDRFFWRL..HPQQVEA-.ELFLTKSFW
ENSMUSP00000034488  ....................p---ETPDKCDPALSFDSVSTL.RGEVLFFKDRYFWRR..SHWNPEP-.EFHLISAFW
ENSMUSP00000018765  .....................--PSTPKACDPHLRFDATTTL.RGEIYFFKDKYFWRR..HPQLRTV-.DLNFISLFW
ENSMUSP00000031390  ....................h-------RCTAH--FDAVAQI.RGEAFFFKGKYFWRL..TRDRHLVSlQPAQMHRFW
ENSMUSP00000034492  ....................t----TPHPCNGDLTFDAITTF.RGEVFFFKGRFYIRV..NRFMPEP-.ELNLIGILW
ENSMUSP00000116263  ....................s----EPHACDPTLTFDAITTF.RREVMFFKGRHLWRV..YSDIAGA-.EFEFIDSFW
ENSMUSP00000113231  ....................s----EPHACDPTLTFDAITTF.RREVMFFKGRHLWRV..YSDIAGA-.EFEFIDSFW
ENSMUSP00000091423  ....................s----EPHACDPTLTFDAITTF.RREVMFFKGRHLWRV..YSDIAGA-.EFEFIDSFW
ENSMUSP00000117469  ....................s----EPHACDPTLTFDAITTF.RREVMFFKGRHLWRV..YSDIAGA-.EFEFIDSFW
ENSMUSP00000000924  .....................-----PDVCETS--FDAVSTI.RGELFFFKAGFVWRL..RSGRLQPG.YPALASRHW
ENSMUSP00000112940  .....................-----PDVCETS--FDAVSTI.RGELFFFKAGFVWRL..RSGRLQPG.YPALASRHW
ENSMUSP00000047261  ....................t-----LDPCNSGLTFDAIITY.RGEVIFFKDRFYIRV..ISFLPEP-.LIDVIDLIW
ENSMUSP00000114129  ...................pp-----STFCHQSLSFDAVTTV.GEKIFFFKDWFFWWK..LPGSPAT-.NITSISSIW
ENSMUSP00000005950  ...................pp-----STFCHQSLSFDAVTTV.GEKIFFFKDWFFWWK..LPGSPAT-.NITSISSIW
ENSMUSP00000034487  ....................p---SIPDLCDSSSSFDAVTML.GKELLFFKDRIFWRR..QVHLPTGI.RPSTITSSF
ENSMUSP00000033185  .....................-----PEHCLDTWSFDAATMDhNGTMLFFKGEFVWRG..HSGTRE--.---LISARW
ENSMUSP00000033185  .....................-------RCSPDPGLTALLSDhRGATYAFTGSHYWRL..DSSRDGW-.HSWPIAHHW
ENSMUSP00000026411  ....................p--GPMPNPCSGE--VDAMVLGpRGKTYAFKGDYVWTV..TDSGPG--.PLFQISALW
ENSMUSP00000017488  ...................pe-----EELCSGK-PFDAFTDLkNGSLFAFRGQYCYEL..DETAVRPG.YPKLIQDVW
ENSMUSP00000024696  .....................-----PDRCEGN--FDAVANI.RGEIFLFKGPWFWRL..QPSGQLVSpRPAGLHRFW
ENSMUSP00000017881  .....................------NPCNVD-VFDAIAEI.QGALHFFKDGWYWKFl.NHRGSPLQ.GPFLTARTW
ENSMUSP00000103772  .....................-----PKYCHSS--FDAITVDgQWRLYVFKGSYFWEV..TVDGNV-S.EPRPLQKRW
ENSMUSP00000021020  .....................-----PKYCHSS--FDAITV-.--------GSYFWEV..TVDGNV-S.EPRPLQKRW
ENSMUSP00000099498  .....................-----PKYCHSS--FDAITV-.---------------..--------.EPRPLQKRW
ENSMUSP00000033278  kgsfdtvfdwirkernqygev-------------------RV.RFNTYFFRNSWYWLYenRNNRTRYG.DPLQILTGW
ENSMUSP00000006171  ....................e-----TNLCNGK-PVDGLTTLrNGTLVAFRGHYFWML..NPFRP-PS.PPRRITEVW
ENSMUSP00000125551  ....................e-----TNLCNGK-PVDGLTTLrNGTLVAFRGHYFWML..NPFRP-PS.PPRRITEVW
ENSMUSP00000107532  ....................e-----TNLCNGK-PVDGLTTLrNGTLVAFRGHYFWML..NPFRP-PS.PPRRITEVW
ENSMUSP00000107533  ....................e-----TNLCNGK-PVDGLTTLrNGTLVAFRGHYFWML..NPFRP-PS.PPRRITEVW
ENSMUSP00000125677  ....................e-----TNLCNGK-PVDGLTTLrNGTLVAFRGHYFWML..NPFRP-PS.PPRRITEVW
ENSMUSP00000128943  ....................e-----TNLCNGK-PVDGLTTLrNGTLVAFRGHYFWML..NPFRP-PS.PPRRITEVW
ENSMUSP00000116279  .....................---------------------.---------------..--------.---------
ENSMUSP00000139102  ...................pg---AKPNICDGN--FNTLAIL.RREMFVFKDQWFWRV..RNNRVMDG.YPMQITYFW
ENSMUSP00000112566  .....................-----PKYCHSS--FDAITVDgQWRLYVFKGSYFWEV..TVDGNV-S.EPRPLQKRW
ENSMUSP00000113853  kgsfdtvfdwirkernqygev-------------------RV.RFNTYFFRNSWYWLYenRNNRTRYG.DPLQILTGW


                              60          70        80                90        100         110     
                               |           |         |                 |          |           |     
d1gena_               PELP...EKIDAVYEAP..QEEKAVFFAGNEYWIYS........ASTLERGYPKPL.TSLGLPPDV..QRVDAAFNWS
ENSMUSP00000029881  RGLP...PSIDAVYENS..-DGNFVFFKGNKYWVFK........DTTLQPGYPHDL.ITLGNGIPP..HGIDSAIWWE
ENSMUSP00000087119  RGLP...ASINTAYERK..-DGKFVFFKGDKHWVFD........EASLEPGYPKHI.KELGRGLPT..DKIDAALFWM
ENSMUSP00000034187  PELP...EKIDAVYEAP..QEEKAVFFAGNEYWVYS........ASTLERGYPKPL.TSLGLPPDV..QQVDAAFNWS
ENSMUSP00000034497  PSLP...SNMDAAYEVT..NRDTVFIFKGNQFWAIR........GHEELAGYPKSI.HTLGLPATV..KKIDAAISNK
ENSMUSP00000034243  RGLP...GNISAAYERQ..-DGHFVFFKGNRYWLFR........EANLEPGYPQPL.SSYGTDIPY..DRIDTAIWWE
ENSMUSP00000029141  KGLP...ARIDAAYERA..-DGRFVFFKGDKYWVFK........EVTVEPGYPHSL.GELGSCLPR..EGIDTALRWE
ENSMUSP00000015394  PELP...NHVDAAYEHP..SRDLMFIFRGRKFWALN........GYDILEGYPRKI.SDLGFPKEV..KRLSAAVHFE
ENSMUSP00000034488  PTLP...SDLDAAYEAH..NTDSVLIFKGSQFWAVR........GNEVQAGYPKGI.HTLGFPPTV..KKIDAAVFEK
ENSMUSP00000018765  PFLP...NGLQAAYEDF..DRDLVFLFKGRQYWALS........GYDLQQGYPRDI.SNYGFPRSV..QAIDAAVS--
ENSMUSP00000031390  RGLPlhlDSVDAVYERT..SDHKIVFFKGDRYWVFK........DNNVEEGYPRPV.SDFSLP--P..GGIDAVFSWA
ENSMUSP00000034492  PNLP...VKLDAAYEAS..MIDQVRYFKGSKVWAVQ........EQSVLRGFPRDIhSFFGFPSNV..THIDAAVCEE
ENSMUSP00000116263  PSLP...ADLQAAYESP..-RDELLVFKDENFWVIR........GYSVLPGYPKSI.HTLGFPRRV..KKIDAAVCDH
ENSMUSP00000113231  PSLP...ADLQAAYESP..-RDELLVFKDENFWVIR........GYSVLPGYPKSI.HTLGFPRRV..KKIDAAVCDH
ENSMUSP00000091423  PSLP...ADLQAAYESP..-RDELLVFKDENFWVIR........GYSVLPGYPKSI.HTLGFPRRV..KKIDAAVCDH
ENSMUSP00000117469  PSLP...ADLQAAYESP..-RDELLVFKDENFWVIR........GYSVLPGYPKSI.HTLGFPRRV..KKIDAAVCDH
ENSMUSP00000000924  QGLP...SPVDAAFEDA..-QGQIWFFQGAQYWVYD........GEKPVLG-PAPL.SKLGLQG--..SPVHAALVWG
ENSMUSP00000112940  QGLP...SPVDAAFEDA..-QGQIWFFQGAQYWVYD........GEKPVLG-PAPL.SKLGLQG--..SPVHAALVWG
ENSMUSP00000047261  PNLP...GKFDAAYEVS..GVDELRFFKGSKVWAVQ........EQNVLEGFPMDIqSFFGFPSNV..TNIDAAVCEE
ENSMUSP00000114129  PSIP...SGIQAAYEIE..SRNQLFLFKDEKYWLIN........NLVPEPHYPRSI.YSLGFSASV..KKVDAAVFDP
ENSMUSP00000005950  PSIP...SGIQAAYEIE..SRNQLFLFKDEKYWLIN........NLVPEPHYPRSI.YSLGFSASV..KKVDAAVFDP
ENSMUSP00000034487  PQLM...SNVDAAYEVA..ERGIAFFFKGPHYWVTR........GFHMQGP-PRTI.YDFGFPRHV..QRIDAAVYLK
ENSMUSP00000033185  KNPI...TSVDAAFRG-..-PDSVFLIKEDKVWVYP........PEKKENGYPKLF.QE-EFPGIP..YPPDAAVECH
ENSMUSP00000033185  PQGP...STVDAAFSW-..-DDKVYLIQGTQVYVFLtkg.....GNNLVSGYPKRLeKELGSPPGIslETIDAAFSCP
ENSMUSP00000026411  EGLP...GNLDAAVYSP..RTRRTHFFKGNKVWRYV........DFKMSPGFPMKF.NR-----VE..PNLDAALYWP
ENSMUSP00000017488  -GIE...GPIDAAFTRIn.CQGKTYLFKGSQYWRFE........DGVLDPGYPRNI.SE-GFSGIP..DNVDAAFALP
ENSMUSP00000024696  EGLPthvKVIQAAYARP..LDGRIILFSGPQFWVFQ........ERQLEGA-ARPL.VEFGLPP-G..EDVDAVFSWP
ENSMUSP00000017881  PALP...ATLDSAFEDP..QTKRVFFFSGRQMWVYT........GKTVLG--PRSL.DKLGLGPEV..THVSGLLP-R
ENSMUSP00000103772  PGLP...PGIEAAAVSL..EDGDFYFFKGNRCWRFQ........GTKSVWGFAQLC.RA---GGLP..RHPDAALFFP
ENSMUSP00000021020  PGLP...PGIEAAAVSL..EDGDFYFFKGNRCWRFQ........GTKSVWGFAQLC.RA---GGLP..RHPDAALFFP
ENSMUSP00000099498  PGLP...PGIEAAAVSL..EDGDFYFFKGNRCWRFQ........GTKSVWGFAQLC.RA---GGLP..RHPDAALFFP
ENSMUSP00000033278  RGIPt..QSIDAYVHVWswGKDERYFFKGSQYWRYDsendqahtEDEQGRSYPKLI.SE-GFPGIP..SPLDTAFYDR
ENSMUSP00000006171  -GIP...SPIDTVFTRCn.CEGKTFFFKDSQYWRFT........NDVVDPGYPKQI.VK-GFGGLT..GKIVAALSIA
ENSMUSP00000125551  -GIP...SPIDTVFTRCn.CEGKTFFFKDSQYWRFT........NDVVDPGYPKQI.VK-GFGGLT..GKIVAALSIA
ENSMUSP00000107532  -GIP...SPIDTVFTRCn.CEGKTFFFKDSQYWRFT........NDVVDPGYPKQI.VK-GFGGLT..GKIVAALSIA
ENSMUSP00000107533  -GIP...SPIDTVFTRCn.CEGKTFFFKDSQYWRFT........NDVVDPGYPKQI.VK-GFGGLT..GKIVAALSIA
ENSMUSP00000125677  -GIP...SPIDTVFTRCn.CEGKTFFFKDSQYWRFT........NDVVDPGYPKQI.VK-GFGGLT..GKIVAALSIA
ENSMUSP00000128943  -GIP...SPIDTVFTRCn.CEGKTFFFKDSQYWRFT........NDVVDPGYPKQI.VK-GFGGLT..GKIVAALSIA
ENSMUSP00000116279  ----...----------..---------GAQYWVYD........GEKPVLG-PAPL.SKLGLQG--..SPVHAALVWG
ENSMUSP00000139102  RGLP...PSIDAVYENS..-DGNFVFFKASWMTVF-........------------.---------..----------
ENSMUSP00000112566  PGLP...PGIEAAAVSL..EDGDFYFFKGT------........------------.---------..----------
ENSMUSP00000113853  RGIPt..QSIDAYVHVWswGKDERYFFKG-------........------------.---------..----------


                                 120        130       140                                           
                                   |          |         |                                           
d1gena_               .....KNKK....TYIFA.GDKFWRYNEVKKKMDPGFPKL......................................
ENSMUSP00000029881  .....DVGK....TYFFK.GDRYWRYSEEMKTMDPGYPKP......................................
ENSMUSP00000087119  .....PNGK....TYFFR.GNKYYRFNEEFRAVDSEYPKN......................................
ENSMUSP00000034187  .....KNKK....TYIFA.GDKFWRYNEVKKKMDPGFPKL......................................
ENSMUSP00000034497  .....EKRK....TYFFV.EDKYWRFDEKKQSMEPGFPRK......................................
ENSMUSP00000034243  .....PTGH....TFFFQ.ADRYWRFNEETQHGDPGYPKP......................................
ENSMUSP00000029141  .....PVGK....TYFFK.GERYWRYSEERRATDPGYPKP......................................
ENSMUSP00000015394  .....NTGK....TLFFS.ENHVWSYDDVNQTMDKDYPRL......................................
ENSMUSP00000034488  .....EKKK....TYFFV.GDKYWRFDETRHVMDKGFPRQ......................................
ENSMUSP00000018765  .....YNGK....TYFFI.NNQCWRYDNQRRSMDPGYPKS......................................
ENSMUSP00000031390  .....HNDR....TYFFK.DQLYWRYDDHTRRMDPGYPAQ......................................
ENSMUSP00000034492  .....ETGK....TYFFV.DHMYWRYDENTQSMDPGYPRL......................................
ENSMUSP00000116263  .....DTRK....TFFFV.GIWCWRYDEMAQAMDRGFPQR......................................
ENSMUSP00000113231  .....DTRK....TFFFV.GIWCWRYDEMAQAMDRGFPQR......................................
ENSMUSP00000091423  .....DTRK....TFFFV.GIWCWRYDEMAQAMDRGFPQR......................................
ENSMUSP00000117469  .....DTRK....TFFFV.GIWCWRYDEMAQAMDRGFPQR......................................
ENSMUSP00000000924  ....pEKNK....IYFFR.GGDYWRFHPRTQRVDNPVPRR......................................
ENSMUSP00000112940  ....pEKNK....IYFFR.GGDYWRFHPRTQRVDNPVPRR......................................
ENSMUSP00000047261  .....ETGK....TYFFV.DHMYWRYDENTRSMDPGYPRL......................................
ENSMUSP00000114129  .....LRQK....VYFFV.DKHYWRYDVRQELMDPAYPKL......................................
ENSMUSP00000005950  .....LRQK....VYFFV.DKHYWRYDVRQELMDPAYPKL......................................
ENSMUSP00000034487  .....EPQK....TLFFV.GEEYYSYDERKKKMEKDYPKN......................................
ENSMUSP00000033185  .....RGECqsegVLFFQ.GNRKWFWDFATRTQKER----......................................
ENSMUSP00000033185  .....GSSR....LYVSS.GRRLWWLDLKSGA--------......................................
ENSMUSP00000026411  .....VNQK....VFLFK.GSGYWQWDELARTDLSRYPKP......................................
ENSMUSP00000017488  ahrysGRER....VYFFK.GKQYWEYEFQQQPSQEECEGSslsavfehfallqrdswenifellfwgrssdgarepqf
ENSMUSP00000024696  .....HNGK....TYLIR.GQKYWRYDEVAARPDPGYPRA......................................
ENSMUSP00000017881  .....RLGK....ALLFS.KGRVWRFDLKSQKVDPQSVIR......................................
ENSMUSP00000103772  .....PLRR....LVLFK.GSRYYVLAQGGMQVEPYYPRS......................................
ENSMUSP00000021020  .....PLRR....LVLFK.GSRYYVLAQGGMQVEPYYPRS......................................
ENSMUSP00000099498  .....PLRR....LVLFK.GSRYYVLAQGGMQVEPYYPRS......................................
ENSMUSP00000033278  .....RQQL....IYFFK.ESLVFAFDVNRNQVLNSYPKK......................................
ENSMUSP00000006171  .kykdRPES....VYFFKrGGNIQQYTYKQEPMKKCTGRRpainysvygeaaqvrrrrferavgpfqthtfrihysvp
ENSMUSP00000125551  .kykdRPES....VYFFKrGGNIQQYTYKQEPMKKCTGRRpainysvygeaaqvrrrrferavgpfqthtfrihysvp
ENSMUSP00000107532  .kykdRPES....VYFFKrGGNIQQYTYKQEPMKKCTGRRpainysvygeaaqvrrrrferavgpfqthtfrihysvp
ENSMUSP00000107533  .kykdRPES....VYFFKrGGNIQQYTYKQEPMKKCTGRRpainysvygeaaqvrrrrferavgpfqthtfrihysvp
ENSMUSP00000125677  .kykdRPES....VYFFKrGGNIQQYTYKQEPMKKCTGRRpainysvygeaaqvrrrrferavgpfqthtfrihysvp
ENSMUSP00000128943  .kykdRPES....VYFFKrGGNIQQYTYKQEPMKKCTGRRpainysvygeaaqvrrrrferavgpfqthtfrihysvp
ENSMUSP00000116279  ....pEKNK....IYFFR.GGDYWRFHPRTQRVDNPVPRR......................................
ENSMUSP00000139102  .....----....-----.---------------------......................................
ENSMUSP00000112566  .....----....-----.---------------------......................................
ENSMUSP00000113853  .....----....-----.---------------------......................................


                                        150             160                                         
                                          |               |                                         
d1gena_               ................IADAWNAIP......DNLDAVV........................................
ENSMUSP00000029881  ................IT-IWKGIP......ESPQGAF........................................
ENSMUSP00000087119  ................IK-VWEGIP......ESPRGSF........................................
ENSMUSP00000034187  ................IADSWNAIP......DNLDAVV........................................
ENSMUSP00000034497  ................IAEDFPGVD......SRVDAVF........................................
ENSMUSP00000034243  ................IS-VWQGIP......TSPKGAF........................................
ENSMUSP00000029141  ................IT-VWKGIP......QAPQGAF........................................
ENSMUSP00000015394  ................IEEEFPGIG......NKVDAVY........................................
ENSMUSP00000034488  ................ITDDFPGIE......PQVDAVL........................................
ENSMUSP00000018765  ................IPSMFPGVN......CRVDAVF........................................
ENSMUSP00000031390  ................GP-LWRGVP......SMLDDAM........................................
ENSMUSP00000034492  ................TAEDFPGID......DKVDDVF........................................
ENSMUSP00000116263  ................IIKCFPGIR......LRVDAVF........................................
ENSMUSP00000113231  ................IIKCFPGIR......LRVDAVF........................................
ENSMUSP00000091423  ................IIKCFPGIR......LRVDAVF........................................
ENSMUSP00000117469  ................IIKCFPGIR......LRVDAVF........................................
ENSMUSP00000000924  ................ST-DWRGVP......SEIDAAF........................................
ENSMUSP00000112940  ................ST-DWRGVP......SEIDAAF........................................
ENSMUSP00000047261  ................IAEDFPGID......YKVDDVI........................................
ENSMUSP00000114129  ................ISTHFPGIK......PKIDAVL........................................
ENSMUSP00000005950  ................ISTHFPGIK......PKIDAVL........................................
ENSMUSP00000034487  ................TEEEFSGVS......GHIDAAV........................................
ENSMUSP00000033185  ................---SWSTV-......GNCTAAL........................................
ENSMUSP00000033185  ................-QATWTEVSwph...EKVDGAL........................................
ENSMUSP00000026411  ................IKELFTGVP......DRPSAAM........................................
ENSMUSP00000017488  ................ISRNWHGVP......GKVDAAMagriyvtgslshsaqakkqkskrrsrkryrsrrgrghrrs
ENSMUSP00000024696  ................LS-LWDGAP......FAPDDVT........................................
ENSMUSP00000017881  ................VDKEFSGVP......WNSHDIF........................................
ENSMUSP00000103772  ................LR-DWAGVP......EEVSGAL........................................
ENSMUSP00000021020  ................LR-DWAGVP......EEVSGAL........................................
ENSMUSP00000099498  ................LR-DWAGVP......EEVSGAL........................................
ENSMUSP00000033278  ................MSQVFPAIMpqnhpfRNLDSAY........................................
ENSMUSP00000006171  mrvsyqdkgflhnevkVSTMWRGFP......NVVTSAI........................................
ENSMUSP00000125551  mrvsyqdkgflhnevkVSTMWRGFP......NVVTSAI........................................
ENSMUSP00000107532  mrvsyqdkgflhnevkVSTMWRGFP......NVVTSAI........................................
ENSMUSP00000107533  mrvsyqdkgflhnevkVSTMWRGFP......NVVTSAI........................................
ENSMUSP00000125677  mrvsyqdkgflhnevkVSTMWRGFP......NVVTSAI........................................
ENSMUSP00000128943  mrvsyqdkgflhnevkVSTMWRGFP......NVVTSAI........................................
ENSMUSP00000116279  ................ST-DWRGVP......SEIDAAF........................................
ENSMUSP00000139102  ................---------......-------........................................
ENSMUSP00000112566  ................---------......-------........................................
ENSMUSP00000113853  ................---------......-------........................................


                                                                                170       180       
                                                                                  |         |       
d1gena_               .........................................DLQ..........GGGH.SYFFKGAYYLKL.......
ENSMUSP00000029881  .........................................VHK..........ENGF.TYFYKGKEYWKF.......
ENSMUSP00000087119  .........................................MGS..........DEVF.TYFYKGNKYWKF.......
ENSMUSP00000034187  .........................................DLQ..........GGGH.SYFFKGAYYLKL.......
ENSMUSP00000034497  .........................................EAF..........--GF.LYFFSGSSQLEF.......
ENSMUSP00000034243  .........................................LSN..........DAAY.TYFYKGTKYWKF.......
ENSMUSP00000029141  .........................................ISK..........EGYY.TYFYKGRDYWKF.......
ENSMUSP00000015394  .........................................EKN..........--GY.IYFFNGPIQFEY.......
ENSMUSP00000034488  .........................................HEF..........--GF.FYFFRGSSQFEF.......
ENSMUSP00000018765  .........................................LQD..........--SF.FLFFSGPQYFAF.......
ENSMUSP00000031390  .........................................RWS..........-DGA.SYFFRGQEYWKVl......
ENSMUSP00000034492  .........................................QKG..........--EN.FYFFHQSVQHRF.......
ENSMUSP00000116263  .........................................QHN..........--GF.LYFFHGSRQFEY.......
ENSMUSP00000113231  .........................................QHN..........--GF.LYFFHGSRQFEY.......
ENSMUSP00000091423  .........................................QHN..........--GF.LYFFHGSRQFEY.......
ENSMUSP00000117469  .........................................QHN..........--GF.LYFFHGSRQFEY.......
ENSMUSP00000000924  .........................................QDA..........-EGY.AYFLRGHLYWKF.......
ENSMUSP00000112940  .........................................QDA..........-EGY.AYFLRGHLYWKF.......
ENSMUSP00000047261  .........................................QKE..........--DN.FYFFHQSIQYRF.......
ENSMUSP00000114129  .........................................YFK..........--RH.YYIFQGAYQLEY.......
ENSMUSP00000005950  .........................................YFK..........--RH.YYIFQGAYQLEY.......
ENSMUSP00000034487  .........................................ELN..........--GY.IYFFSGRKTFKY.......
ENSMUSP00000033185  .........................................RWL..........--ER.YYCFQGNKFLRF.......
ENSMUSP00000033185  .........................................CLDkslgpntcssNGSS.LYFIHGPNLYCY.......
ENSMUSP00000026411  .........................................SWQ..........-DGQ.VYFFKGKEYWRL.......
ENSMUSP00000017488  qssnsrrssrsiwfslfsseesglgtynnydydmdwlvpatCEP..........-IQS.VYFFSGDKYYRV.......
ENSMUSP00000024696  .........................................ISN..........-TGD.TYFFKGTHFWRF.......
ENSMUSP00000017881  .........................................QYQ..........--DK.AYFCHGKFFWRVsfqnevn
ENSMUSP00000103772  .........................................PRP..........-DGS.IIFFRDDHYWHL.......
ENSMUSP00000021020  .........................................PRP..........-DGS.IIFFRDDHYWHL.......
ENSMUSP00000099498  .........................................PRP..........-DGS.IIFFRDDHYWHL.......
ENSMUSP00000033278  .........................................YSY..........AHNS.IFFFKGNSYWKV.......
ENSMUSP00000006171  .........................................TLPnirk......PDGYdYYAFSKDQYYNI.......
ENSMUSP00000125551  .........................................TLPnirk......PDGYdYYAFSKDQYYNI.......
ENSMUSP00000107532  .........................................TLPnirk......PDGYdYYAFSKDQYYNI.......
ENSMUSP00000107533  .........................................TLPnirk......PDGYdYYAFSKDQYYNI.......
ENSMUSP00000125677  .........................................TLPnirk......PDGYdYYAFSKDQYYNI.......
ENSMUSP00000128943  .........................................TLPnirk......PDGYdYYAFSKDQYYNI.......
ENSMUSP00000116279  .........................................QDA..........-EGY.AYFLRGHLYWKF.......
ENSMUSP00000139102  .........................................---..........----.------------.......
ENSMUSP00000112566  .........................................---..........----.------------.......
ENSMUSP00000113853  .........................................---..........----.------------.......


                                    190       200        
                                      |         |        
d1gena_               ..ENQSLKS.....VKFGSIKSDWLGC........
ENSMUSP00000029881  ..NNQILKVep...GYPRSILKDFMGC........
ENSMUSP00000087119  ..NNQKLKVep...GYPKSALRDWMGC........
ENSMUSP00000034187  ..ENQSLKS.....VKFGSIKSDWLGC........
ENSMUSP00000034497  ..DPNAKKV.....THILK-SNSWFNC........
ENSMUSP00000034243  ..NNERLRMep...GHPKSILRDFMGC........
ENSMUSP00000029141  ..DNQKLSVep...GYPRNILRDWMGC........
ENSMUSP00000015394  ..SIWSNRI.....VRVMPT-NSILWC........
ENSMUSP00000034488  ..DPNARTV.....THILK-SNSWLLC........
ENSMUSP00000018765  ..NFVSHRV.....TRVAR-SNLWL--n.......
ENSMUSP00000031390  ..D-GELEAap...GYPQSTARDWLVCg.......
ENSMUSP00000034492  ..NLQIRRV.....DDSRD-SSTWF--n.......
ENSMUSP00000116263  ..DMKAKNI.....TQVIK-TNSWFLC........
ENSMUSP00000113231  ..DMKAKNI.....TQVIK-TNSWFLC........
ENSMUSP00000091423  ..DMKAKNI.....TQVIK-TNSWFLC........
ENSMUSP00000117469  ..DMKAKNI.....TQVIK-TNSWFLC........
ENSMUSP00000000924  ..DPVKVKVle...GFPRPVGPDFFDCa.......
ENSMUSP00000112940  ..DPVKVKVle...GFPRPVGPDFFDCa.......
ENSMUSP00000047261  ..NLKTRRI.....DDSSD-INTWFNC........
ENSMUSP00000114129  ..DPLFRRV.....TKTLK-STSWFGC........
ENSMUSP00000005950  ..DPLFRRV.....TKTLK-STSWFGC........
ENSMUSP00000034487  ..DTEKEDV.....VSVVK-SSSWIGC........
ENSMUSP00000033185  ..NPVTGEVpp...RYPLDARDYFVSCpgrg....
ENSMUSP00000033185  ..SSIDKLNaakslPQPQKV-------nsil....
ENSMUSP00000026411  ..NQQLRVAk....GYPRN-TTHWMHC........
ENSMUSP00000017488  ..NLRTRRVdsvnpPYPRSIAQYWLGC........
ENSMUSP00000024696  ..AEGSVKAes...DSPQPIGPKWLDCp.......
ENSMUSP00000017881  kvDHEVNQV.....DDVGYVTYDLLQC........
ENSMUSP00000103772  ..DQAKLRVts...SGRWATELSWMGCwn......
ENSMUSP00000021020  ..DQAKLRVts...SGRWATELSWMGCwn......
ENSMUSP00000099498  ..DQAKLRVts...SGRWATELSWMGCwn......
ENSMUSP00000033278  ..-------.....-------------vsdkdkqq
ENSMUSP00000006171  ..DVPTRTAraittRSGQTLSKIWYNC........
ENSMUSP00000125551  ..DVPTRTAraittRSGQTLSKIWYNC........
ENSMUSP00000107532  ..DVPTRTAraittRSGQTLSKIWYNC........
ENSMUSP00000107533  ..DVPTRTAraittRSGQTLSKIWYNC........
ENSMUSP00000125677  ..DVPTRTAraittRSGQTLSKIWYNC........
ENSMUSP00000128943  ..DVPTRTAraittRSGQTLSKIWYNC........
ENSMUSP00000116279  ..DPVKV--.....-------------iqt.....
ENSMUSP00000139102  ..-------.....-------------........
ENSMUSP00000112566  ..-------.....-------------........
ENSMUSP00000113853  ..-------.....-------------........


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Model: 0046971 (list models)
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Output in FASTA-like format: NoYes
Output column indices: NoYes
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Add alignments from genomes

Select below additional genomes you would like to see alignments for, then click on 'Re-Submit'. The genome assignments will be added to this page.


Select to display   Genome
NoYes   Canis familiaris 58 (pseudogenes) - Dog
NoYes   Danio rerio 58 (pseudogenes) - Zebrafish
NoYes   Gallus gallus 58 (pseudogene) - Chicken
NoYes   Homo sapiens 58 (pseudogenes) - Human
NoYes   Pan troglodytes 58 (pseudogenes) - Chimpanzee
NoYes   Homo sapiens 76_38 - Human
NoYes   Pan troglodytes 76_2.1.4 - Chimpanzee
NoYes   Gorilla gorilla 76_3.1 - Western gorilla
NoYes   Pongo abelii 76_2 - Sumatran orangutan
NoYes   Tarsius syrichta 76_1
NoYes   Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbon
NoYes   Papio anubis 76 - Olive baboon
NoYes   Macaca mulatta 76_1 - Rhesus monkey
NoYes   Callithrix jacchus 76_3.2.1 - White-tufted-ear marmoset
NoYes   Otolemur garnettii 76_3 - Small-eared galago
NoYes   Microcebus murinus 76_1 - Gray mouse lemur
NoYes   Rattus norvegicus 76_5.0 - Norway rat
NoYes   Mus musculus 76_38 - House mouse
NoYes   Dipodomys ordii 76_1 - Ord's kangaroo rat
NoYes   Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrel
NoYes   Heterocephalus glaber v1.7-2 - Naked mole-rat
NoYes   Cavia porcellus 76_3 - Domestic guinea pig
NoYes   Oryctolagus cuniculus 76_2 - Rabbit
NoYes   Ochotona princeps 76 - American pika
NoYes   Tupaia belangeri 76 - Northern tree shrew
NoYes   Sus scrofa 76_10.2 - Pig
NoYes   Bos taurus 76_3.1 - Cattle
NoYes   Ovis aries 76_3.1 - Sheep
NoYes   Vicugna pacos 76_1 - Alpaca
NoYes   Tursiops truncatus 76_1 - Bottlenose dolphin
NoYes   Mustela putorius furo 76_1.0 - Domestic ferret
NoYes   Ailuropoda melanoleuca 76_1 - Giant panda
NoYes   Canis familiaris 76_3.1 - Dog
NoYes   Felis catus 76_6.2 - Domestic cat
NoYes   Equus caballus 76_2 - Horse
NoYes   Myotis lucifugus 76_2.0 - Little brown bat
NoYes   Pteropus vampyrus 76_1 - Large flying fox
NoYes   Sorex araneus 76_1 - European shrew
NoYes   Erinaceus europaeus 76 - Western European hedgehog
NoYes   Procavia capensis 76_1 - Cape rock hyrax
NoYes   Loxodonta africana 76_3 - African savanna elephant
NoYes   Echinops telfairi 76 - Small Madagascar hedgehog
NoYes   Dasypus novemcinctus 76_2 - Nine-banded armadillo
NoYes   Choloepus hoffmanni 76_1 - Hoffmann's two-fingered sloth
NoYes   Macropus eugenii 76_1.0 - Tammar wallaby
NoYes   Sarcophilus harrisii 76_7.0 - Tasmanian devil
NoYes   Monodelphis domestica 76_5 - Gray short-tailed opossum
NoYes   Ornithorhynchus anatinus 76_5 - Platypus
NoYes   Saccoglossus kowalevskii v3.0
NoYes   Petromyzon marinus 76_7.0 - Sea lamprey
NoYes   Meleagris gallopavo 76_2 - Turkey
NoYes   Gallus gallus 76_4 - Chicken
NoYes   Anas platyrhynchos 76_1.0 - Mallard
NoYes   Taeniopygia guttata 76_3.2.4 - Zebra finch
NoYes   Ficedula albicollis 76_1.0 - Collared flycatcher
NoYes   Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtle
NoYes   Anolis carolinensis 76_2.0 - Green anole
NoYes   Xenopus laevis - African clawed frog
NoYes   Xenopus tropicalis 76_4.2 - Tropical clawed frog
NoYes   Latimeria chalumnae 76_1 - Coelacanth
NoYes   Lepisosteus oculatus 76 - Spotted gar
NoYes   Gadus morhua 76_1 - Atlantic cod
NoYes   Tetraodon nigroviridis 76_8 - Spotted green pufferfish
NoYes   Takifugu rubripes 76_4 - Torafugu
NoYes   Gasterosteus aculeatus 76_1 - Three-spined stickleback
NoYes   Oryzias latipes 76_1 - Japanese medaka
NoYes   Xiphophorus maculatus 76_4.4.2 - Southern platyfish
NoYes   Poecilia formosa 76 - Amazon molly
NoYes   Oreochromis niloticus 76_1.0 - Nile tilapia
NoYes   Astyanax mexicanus 76 - Mexican tetra
NoYes   Danio rerio 76_9 - Zebrafish
NoYes   Oikopleura dioica
NoYes   Ciona savignyi 76_2.0 - Pacific transparent sea squirt
NoYes   Ciona intestinalis 76 - Vase tunicate
NoYes   Strongylocentrotus purpuratus v3.1 - Purple sea urchin
NoYes   Adineta vaga
NoYes   Octopus bimaculoides 280
NoYes   Crassostrea gigas 22 - Pacific oyster
NoYes   Lottia gigantea - Owl limpet
NoYes   Helobdella robusta
NoYes   Capitella sp. I
NoYes   Danaus plexippus OGS1.0 - Monarch butterfly
NoYes   Heliconius melpomene - Postman butterfly
NoYes   Bombyx mori - Domestic silkworm
NoYes   Nasonia vitripennis - Jewel wasp
NoYes   Apis mellifera 38.2d - Honey bee
NoYes   Harpegnathos saltator v3.3 - Jerdon's jumping ant
NoYes   Linepithema humile v1.1 - Argentine ant
NoYes   Pogonomyrmex barbatus v1.2 - Red harvester ant
NoYes   Solenopsis invicta v.2.2.3 - Red fire ant
NoYes   Acromyrmex echinatior v3.8 - Panamanian leafcutter ant
NoYes   Atta cephalotes v1.1
NoYes   Camponotus floridanus v3.3 - Florida carpenter ant
NoYes   Lucilia cuprina - Australian sheep blowfly
NoYes   Drosophila grimshawi 1.3
NoYes   Drosophila willistoni 1.3
NoYes   Drosophila pseudoobscura 2.13
NoYes   Drosophila persimilis 1.3
NoYes   Drosophila suzukii
NoYes   Drosophila yakuba 1.3
NoYes   Drosophila simulans 1.3
NoYes   Drosophila sechellia 1.3
NoYes   Drosophila melanogaster 76_5 - Fruit fly
NoYes   Drosophila erecta 1.3
NoYes   Drosophila ananassae 1.3
NoYes   Drosophila virilis 1.2
NoYes   Drosophila mojavensis 1.3
NoYes   Megaselia scalaris 22
NoYes   Aedes aegypti 55 - Yellow fever mosquito
NoYes   Culex pipiens quinquefasciatus - Southern house mosquito
NoYes   Anopheles darlingi 22 - American malaria mosquito
NoYes   Anopheles gambiae 49_3j - African malaria mosquito
NoYes   Tribolium castaneum 3.0 - Red flour beetle
NoYes   Pediculus humanus corporis - Human body louse
NoYes   Acyrthosiphon pisum - Pea aphid
NoYes   Rhodnius prolixus 22
NoYes   Daphnia pulex - Common water flea
NoYes   Strigamia maritima 22
NoYes   Sarcoptes scabiei
NoYes   Tetranychus urticae - Two-spotted spider mite
NoYes   Ixodes scapularis - Black-legged tick
NoYes   Pristionchus pacificus
NoYes   Onchocerca volvulus 22
NoYes   Brugia malayi WS250 - Agent of lymphatic filariasis
NoYes   Caenorhabditis japonica
NoYes   Caenorhabditis brenneri
NoYes   Caenorhabditis remanei
NoYes   Caenorhabditis elegans 76_235 - Roundworm
NoYes   Caenorhabditis briggsae 2
NoYes   Trichinella spiralis 22
NoYes   Hymenolepis microstoma
NoYes   Echinococcus multilocularis
NoYes   Echinococcus granulosus
NoYes   Taenia solium - Pork tapeworm
NoYes   Schistosoma mansoni
NoYes   Mnemiopsis leidyi - Sea walnut
NoYes   Acropora digitifera v1.0
NoYes   Nematostella vectensis 1.0 - Starlet sea anemone
NoYes   Hydra vulgaris
NoYes   Amphimedon queenslandica
NoYes   Capsaspora owczarzaki ATCC 30864
NoYes   Sphaerobolus stellatus v1.0
NoYes   Pleurotus ostreatus - Oyster mushroom
NoYes   Hebeloma cylindrosporum h7 v2.0
NoYes   Gloeophyllum trabeumv1.0
NoYes   Postia placenta
NoYes   Coccidioides posadasii RMSCC 3488
NoYes   Coccidioides immitis RS
NoYes   Uncinocarpus reesii 1704
NoYes   Penicillium chrysogenum v1.0
NoYes   Aspergillus nidulans FGSC A4
NoYes   Aspergillus sydowii v1.0
NoYes   Aspergillus glaucus
NoYes   Aspergillus terreus NIH2624
NoYes   Aspergillus wentii v1.0
NoYes   Aspergillus flavus NRRL3357
NoYes   Pinus taeda - Loblolly pine
NoYes   Picea abies - Norway spruce
NoYes   Medicago truncatula - Barrel medic
NoYes   Phaseolus vulgaris v186 - String bean
NoYes   Actinidia chinensis Hongyang
NoYes   Triticum urartu 22
NoYes   Aegilops tauschii 22
NoYes   Oryza barthii 22 - African wild rice
NoYes   Oryza meridionalis 22
NoYes   Oryza glaberrima - African rice
NoYes   Oryza nivara 22
NoYes   Oryza sativa ssp. japonica 5.0 - Japanese rice
NoYes   Oryza sativa v193 - Rice
NoYes   Phyllostachys heterocyclavar. pubescens - Mosochiku
NoYes   Thecamonas trahens ATCC 50062
NoYes   Leishmania mexicana 2.4
NoYes   Leishmania major strain Friedlin
NoYes   Leishmania infantum JPCM5 2.4
NoYes   Leishmania braziliensis MHOM/BR/75/M2904 2.4
NoYes   Trypanosoma cruzi strain CL Brener
NoYes   Frankia alni ACN14a
NoYes   Nocardia cyriacigeorgica GUH-2
NoYes   Maricaulis maris MCS10
NoYes   Shewanella denitrificans OS217
NoYes   Hahella chejuensis KCTC 2396
NoYes   Photorhabdus asymbiotica
NoYes   Photorhabdus luminescens subsp. laumondii TTO1
NoYes   Xenorhabdus bovienii SS-2004
NoYes   Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frog
NoYes   Drosophila melanogaster FlyBase 5.12 - Fruit fly
NoYes   Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquito
NoYes   Ascaris suum Victoria/Ghent - Pig roundworm
NoYes   Caenorhabditis elegans WormBase WS218 - Roundworm
NoYes   Coccidioides posadasii str. Silveira
NoYes   Coccidioides immitis RMSCC 3703
NoYes   Coccidioides immitis RMSCC 2394
NoYes   Coccidioides immitis H538.4
NoYes   Oryza sativa ssp. Indica - Long-grained rice
NoYes   Homo sapiens 69_37 - Human
NoYes   Pan troglodytes 69_2.1.4 - Chimpanzee
NoYes   Gorilla gorilla 69_3.1 - Western gorilla
NoYes   Pongo abelii 69_2 - Sumatran orangutan
NoYes   Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbon
NoYes   Macaca mulatta 69_1 - Rhesus monkey
NoYes   Callithrix jacchus 69_3.2.1 - White-tufted-ear marmoset
NoYes   Otolemur garnettii 69_3 - Small-eared galago
NoYes   Tarsius syrichta 69_1
NoYes   Microcebus murinus 69_1 - Gray mouse lemur
NoYes   Rattus norvegicus 69_3.4 - Norway rat
NoYes   Mus musculus 69_38 - House mouse
NoYes   Dipodomys ordii 69_1 - Ord's kangaroo rat
NoYes   Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrel
NoYes   Cavia porcellus 69_3 - Domestic guinea pig
NoYes   Oryctolagus cuniculus 69_2 - Rabbit
NoYes   Ochotona princeps 69 - American pika
NoYes   Tupaia belangeri 69 - Northern tree shrew
NoYes   Sus scrofa 69_10.2 - Pig
NoYes   Bos taurus 69_3.1 - Cattle
NoYes   Vicugna pacos 69_1 - Alpaca
NoYes   Tursiops truncatus 69_1 - Bottlenose dolphin
NoYes   Mustela putorius furo 69_1.0 - Domestic ferret
NoYes   Ailuropoda melanoleuca 69_1 - Giant panda
NoYes   Canis familiaris 69_3.1 - Dog
NoYes   Felis catus 69 - Domestic cat
NoYes   Equus caballus 69_2 - Horse
NoYes   Myotis lucifugus 69_2.0 - Little brown bat
NoYes   Pteropus vampyrus 69_1 - Large flying fox
NoYes   Sorex araneus 69_1 - European shrew
NoYes   Erinaceus europaeus 69 - Western European hedgehog
NoYes   Procavia capensis 69_1 - Cape rock hyrax
NoYes   Loxodonta africana 69_3 - African savanna elephant
NoYes   Echinops telfairi 69 - Small Madagascar hedgehog
NoYes   Dasypus novemcinctus 69_2 - Nine-banded armadillo
NoYes   Choloepus hoffmanni 69_1 - Hoffmann's two-fingered sloth
NoYes   Macropus eugenii 69_1.0 - Tammar wallaby
NoYes   Sarcophilus harrisii 69_7.0 - Tasmanian devil
NoYes   Monodelphis domestica 69_5 - Gray short-tailed opossum
NoYes   Ornithorhynchus anatinus 69_5 - Platypus
NoYes   Petromyzon marinus 69_7.0 - Sea lamprey
NoYes   Meleagris gallopavo 69_2 - Turkey
NoYes   Gallus gallus 69_2 - Chicken
NoYes   Taeniopygia guttata 69_3.2.4 - Zebra finch
NoYes   Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtle
NoYes   Anolis carolinensis 69_2.0 - Green anole
NoYes   Xenopus tropicalis 69_4.2 - Tropical clawed frog
NoYes   Latimeria chalumnae 69_1 - Coelacanth
NoYes   Gadus morhua 69_1 - Atlantic cod
NoYes   Tetraodon nigroviridis 69_8 - Spotted green pufferfish
NoYes   Takifugu rubripes 69_4 - Torafugu
NoYes   Gasterosteus aculeatus 69_1 - Three-spined stickleback
NoYes   Oryzias latipes 69_1 - Japanese medaka
NoYes   Xiphophorus maculatus 69_4.4.2 - Southern platyfish
NoYes   Oreochromis niloticus 69_1.0 - Nile tilapia
NoYes   Danio rerio 69_9 - Zebrafish
NoYes   Ciona savignyi 69_2.0 - Pacific transparent sea squirt
NoYes   Ciona intestinalis 69 - Vase tunicate
NoYes   Drosophila melanogaster 69_5 - Fruit fly
NoYes   Caenorhabditis elegans 69_215 - Roundworm
NoYes   Homo sapiens 75_37 - Human
NoYes   Homo sapiens - Human
NoYes   Mus musculus 63_37 (longest transcript per gene) - House mouse
NoYes   Loa loa v3.3 - Eye worm
NoYes   Wuchereria bancrofti v1.0 - Agent of lymphatic filariasis
NoYes   Brugia malayi v1.0 - Agent of lymphatic filariasis
NoYes   Lotus japonicus
NoYes   Phoenix dactylifera - Date palm
NoYes   Dump bottom (Dump bottom) (meta-genome)
NoYes   Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)
NoYes   Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)
NoYes   Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)
NoYes   Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)
NoYes   NCBI 2017_08 genome
NoYes   Protozoadb 2010_08 (Protozoadb)
NoYes   Sludge/US, Phrap Assembly (meta-genome)
NoYes   Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)
NoYes   Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)
NoYes   Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)
NoYes   Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)
NoYes   STRING v9.0.5 (STRING)
NoYes   Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)
NoYes   Uniprot 2018_03 genome
NoYes   Global Ocean Sampling Expedition (GOS)
NoYes   NCBI viral sequences (Viral)
NoYes   PDB chains (SCOP 1.75) (PDB)
NoYes   Protein Data Bank (all PDB sequenc)
NoYes   SCOP2 SCOPe CATH ECOD (all domain sequ)
NoYes   TargetDB (Targets)
NoYes   UniProt viral sequences (Viral)
NoYes   ALL (only advised for small superfamilies)


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