SUPERFAMILY 1.75 HMM library and genome assignments server

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SRCR-like alignments in Gorilla gorilla 76_3.1

These alignments are sequences aligned to the 0035772 model.

Sophisticated options are available for refining alignments:


Jump to [ Top of page · Refine alignments · Add alignments from genomes ]

Alignments

The numbers along the top are the segment numbers of the HMM states, and each sequence is seperately aligned to the model.
The first sequence is the seed the model was built from.
Upper case letters are aligned, lower case letters are insertions, '-' signifies a deletion and '.' is nothing.

                                           10          20              30                  40       
                                            |           |               |                   |       
d1by2a_               ..........avn---DGDMRLAD..GGATNQGRVEIFY..R....GQWGTVCDNL..W........DLTDASVVCRA
ENSGGOP00000025344  .............CSEDKRLRLVD..GDSRCAGRVEIYH..D....GFWGTICDDG..W........DLSDAHVVCRK
ENSGGOP00000022120  .............CIESGQLRLVN..GGGRCAGRVEIYH..E....GSWGTICDDN..W........DLSDAHVVCRQ
ENSGGOP00000003108  ............l-----ALRLVN..GDGRCQGRVEILY..R....GSWGTVCDDS..W........DTNDANVVCRQ
ENSGGOP00000017262  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDS..W........DTNDANVVCRQ
ENSGGOP00000017262  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDS..W........DTNDANVVCRQ
ENSGGOP00000003108  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDS..W........DTNDANVVCRQ
ENSGGOP00000017262  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDS..W........DTNDANVVCRQ
ENSGGOP00000003108  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDS..W........DTNDANVVCRQ
ENSGGOP00000017262  ............s----LALRLVN..GSDRCQGRVEVLY..R....GSWGTVCDDS..W........DTSDANVVCRQ
ENSGGOP00000003108  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDY..W........DTNDANVVCRQ
ENSGGOP00000003108  ............s----LALRLVN..GSDRCQGRVEVLY..R....GSWGTVCDDS..W........DTSDANVVCRQ
ENSGGOP00000017262  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDY..W........DTNDANVVCRQ
ENSGGOP00000017262  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDS..W........DTSDANVVCRQ
ENSGGOP00000003108  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDY..W........DTNDANVVCRQ
ENSGGOP00000003108  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDS..W........DTSDANVVCRQ
ENSGGOP00000003108  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDS..W........DTNDANVVCRQ
ENSGGOP00000003108  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDY..W........DTNDANVVCRQ
ENSGGOP00000017262  ............s----LALRLVN..GGDRCQGRVEVLY..R....GSWGTVCDDY..W........DTNDANVVCRQ
ENSGGOP00000003384  ...........gl-----GLRLVN..GSSRCEGRVEVYH..A....NAWGTVCDDS..W........SIEDAHVVCRQ
ENSGGOP00000004640  ............g---SLGVRLAA..GPGRCAGRVEVLH..G....GAWGTVCDDA..W........DLRDAHVVCRQ
ENSGGOP00000003108  ..........lrl------VNLNS..SYGLCAGRVEIYH..G....GTWGTVCDDS..W........TIQEAEVVCRQ
ENSGGOP00000017262  ..........lrl------VNLNS..SYGLCAGRVEIYH..G....GTWGTVCDDS..W........TIQEAEVVCRQ
ENSGGOP00000004637  .............CPEEGALRVRG..GEDRCSGRVELWH..A....GSWGTVCDDG..W........DLADAEVVCRQ
ENSGGOP00000003572  ............r------LRLVS..GPHRCTGRLEVWH..G....GRWGTVCDDG..W........DLRDAAVACRE
ENSGGOP00000025344  ............r------IRVRG..GDTECSGRVEIWH..A....GSWGTVCDDS..W........DLAEAEVVCQQ
ENSGGOP00000003384  ...........gp-----ELRLVG..GSGQCSGHVEVLH..K....GSWGTVCDDL..W........DLNEAEVVCQQ
ENSGGOP00000005334  ...........fq-----ELRLVG..GPSRCQGRLEVMH..G....GSWGSVCDDD..W........DVVDANVVCRQ
ENSGGOP00000003108  ............d-----------..---RCQGRVEVLY..R....GSWGTVCDDS..W........DTNDANVVCRQ
ENSGGOP00000022120  ............n----LEMRLMN..GGNMCSGRIEIKF..Q....GRWGTVCDDN..F........NIDHASVICRQ
ENSGGOP00000005334  ............g-----HLRLVN..GAHRCEGRVELYL..G....QRWGTVCDDA..W........DLRAAGVLCRQ
ENSGGOP00000022120  ............k------IRLQE..GPTSCSGRVEIWH..G....GSWGTVCDDS..W........DLDDAQVVCQQ
ENSGGOP00000003384  ............g---WPELRLMG..GSGRCSGRVEIHH..Q....GAWGTVCDDL..W........DLNEAKVVCRQ
ENSGGOP00000005334  ............g-----SVRLVG..GANLCQGRVEIMH..S....GLWGTVCDDD..W........GLPDAAVVCRQ
ENSGGOP00000003384  ............d---WPELRLVG..GSGRCSGRVEILH..Q....GAWGTVCDGL..W........DLNEAEVVCRQ
ENSGGOP00000003572  ...........er------LRLAD..GPHGCAGRLEVWH..G....GRWGTVCDDG..W........DLRDAAVACRQ
ENSGGOP00000002772  .............------IRLAG..GSSVHEGRVELYH..A....GQWGTVCDDQ..W........DDADAEVICRQ
ENSGGOP00000003572  ............p-----RLRLAD..GPHGCAGRLEVWH..G....GRWGSVCDDA..W........DLRDAAVACRE
ENSGGOP00000003572  ............g---LFRVRLAD..GPNRCAGRLEVWH..A....GRWGTVCDDN..W........DLRDATVACWE
ENSGGOP00000008133  ...........dg-----DMRLAD..GGATNQGRVEIFY..R....GQWGTVCDNL..W........DLTDASVVCRA
ENSGGOP00000002772  ............f-----PVRLMD..GENKKEGRVEVFI..N....GQWGTICDDG..W........TDKDAAVICRQ
ENSGGOP00000004640  .............CPEEGALRVRG..GEDRCSGRVELWH..A....GSWGTVCDDG..W........DLADAEVVCRQ
ENSGGOP00000005334  ............g-----RLRLVG..GPGPCRGRVEVLH..A....GGWGTVCDDD..W........DFADARVACRE
ENSGGOP00000025344  ............l-----DLRLVG..AHSPCYGRLEVKY..Q....GEWGTVCHDR..W........STRNAAVVCKQ
ENSGGOP00000003572  ............s----PQLRLVA..GPSKCSGRLEVWH..D....QRWGTVCDDS..W........DMRDSAVVCRE
ENSGGOP00000003384  ............w----MEVRLLN..GTGRCSGRVEVLV..Q....GTWGTVCDDL..W........DLAEATVVCRQ
ENSGGOP00000008487  .............CAENRALRLVD..GGSSCAGRVEMLE..H....GEWGSVCDDT..W........DLEDAHVVCRQ
ENSGGOP00000022120  ............l-----SLRLVD..GVTECSGRLEVRF..Q....GEWGTICDDG..W........DSYDAAVACKQ
ENSGGOP00000001829  ...........mm------IRLVN..GSGPHEGRVEVYH..D....RRWGTVCDDG..W........DKKDGDVVCRM
ENSGGOP00000025626  ............t--PFTKVRLVG..GSGPHEGRVEILH..S....GQWGTICDDR..W........EVRVGQVVCRS
ENSGGOP00000018457  ............t--PFTKVRLVG..GSGPHEGRVEILH..S....GQWGTICDDR..W........EVRVGQVVCRS
ENSGGOP00000025344  ............l-----ELRLVN..GDGPCSGTVEVKF..Q....GQWGTVCDDG..W........NTTASTVVCKQ
ENSGGOP00000004703  ............t-----KLRLVGp.ESKPEEGRLEVLH..Q....GQWGTVCDDN..F........AIQEATVACRQ
ENSGGOP00000013492  ............i-----QLRLAGq.KRKHSEGRVEVYY..D....GQWGTVCDDD..F........SIHAAHVVCRE
ENSGGOP00000025344  ............l-----GLRLVD..GNNSCSGRVEVKF..Q....ERWGTICDDG..W........NLNTAAVVCRQ
ENSGGOP00000022120  ............e------LRLVD..GENKCSGRVEVKV..Q....EEWGTVCNNG..W........SMEAVSVICNQ
ENSGGOP00000025344  ............w-----GLRLVG..GSNRCSGRLEVYF..Q....GRWGTVCDDG..W........NSKAAAVVCSQ
ENSGGOP00000003384  .............-----EVRLLN..GTGRCSGRMEVLV..Q....GTWRTVCDDL..W........NLAKATVVCRQ
ENSGGOP00000027702  ............a-----RVRLKG..GAHPGEGRVEVLK..A....STWGTVCDRK..W........DLHAASVVCRE
ENSGGOP00000006200  ............a-----RVRLKG..GAHPGEGRVEVLK..A....STWGTVCDRK..W........DLHAASVVCRE
ENSGGOP00000008535  .............CEDPFDLRLVG..GDNLCCGRLEVLH..K....GVWGSVCDDD..W........GEKEDQVVCKQ
ENSGGOP00000003384  ............p-----PLRLAG..GRSRCEGRVELRH..Q....GVWGTVCDDH..W........NIRNARVVCRL
ENSGGOP00000007976  ............g-----EVRLVRpaGLSSGSGRVEVFV..G....GRWGTVCDDS..W........NISGAAVVCRQ
ENSGGOP00000026333  ............g-----EVRLVRpaGLSSGSGRVEVFV..G....GRWGTVCDDS..W........NISGAAVVCRQ
ENSGGOP00000025344  ............d----LELRLVG..GTNRCMGRVELKI..Q....GRWGTVCHHK..W........NNAAADVVCKQ
ENSGGOP00000002772  .............------IRLAG..GKGSHEGRLEVYY..R....GQWGTVCDDG..W........TELNTYVVCRQ
ENSGGOP00000022120  ...........re------PRLVG..GDIPCSGRVEVKH..G....DMWGSVCDSD..F........SLEAASVLCRE
ENSGGOP00000013492  ............l------VRLRG..GAYIGEGRVEVLK..N....GEWGTVCDDK..W........DLVSASVVCRE
ENSGGOP00000027702  ...........rf-------RLAGf.PRKPYEGRVEIQR..A....GEWGTICDDD..F........TLQAAHVLCRE
ENSGGOP00000006200  ...........rf-------RLAGf.PRKPYEGRVEIQR..A....GEWGTICDDD..F........TLQAAHVLCRE
ENSGGOP00000008535  ............g------VRLAD..GPGHCKGRVEVKH..Q....NQWYTVCQTG..W........SLRAAKVVCRQ
ENSGGOP00000003384  ............c----VEVRLLN..GTGRCLGRVEVLI..Q....GTWGMVCDDF..W........DLAEAAVVCRQ
ENSGGOP00000004703  ............p-----RVRLRS..GAQVGQGRVEVLV..N....RQWGTVCDHR..W........NLISASVVCRQ
ENSGGOP00000004637  .............-----------..------------H..G....GAWGTVCDDA..W........DLRDAHVVCRQ
ENSGGOP00000022120  ............y----TEIRLVN..GKTPCEGRVELKT..L....GAWGSLCNSH..W........DIEDAHVLCQQ
ENSGGOP00000004640  ............e------FRMVN..GSSSCEGRVELQV..Q....GSWAPLCATH..W........DIADATVLCHQ
ENSGGOP00000004637  ............e------FRMVN..GSSSCEGRVELQV..Q....GSWAPLCATH..W........DIADATVLCHQ
ENSGGOP00000008535  ...........ps-----GVRLVG..GLHRCEGRVEVEQ..K....GQWGTVCDDG..W........DIKDVAVVCRE
ENSGGOP00000004637  ...........gh----TEARLVG..GEHPCAGRLEVKR..G....LTWGTVCDAD..L........DLATAHVVCRE
ENSGGOP00000004640  ...........gh----TEARLVG..GEHPCAGRLEVKR..G....LTWGTVCDAD..L........DLATAHVVCRE
ENSGGOP00000015205  ............n---SVSVRIVG..SSNR--GRAEVYY..S....GIWGTICDDE..W........HNSDATVFCRM
ENSGGOP00000025344  ...........hr-----QPRLVG..ADMPCSGRVEVKH..A....DTWRSVCDSD..F........SLHAANVLCRE
ENSGGOP00000025344  ............l-----ELRLAD..GSNNCSGRVEVRI..H....EQWWTICDQN..W........KNEQALVVCKQ
ENSGGOP00000004640  ...........pg-----ALRLAY..RHSTCDGVVLVRH..H....GAWGYVCNQE..W........TLAEASVVCRQ
ENSGGOP00000004637  ...........pg-----ALRLAY..RHSTCDGVVLVRH..H....GAWGYVCNQE..W........TLAEASVVCRQ
ENSGGOP00000025344  ............m-----ELRLVG..GSSRCAGKVEVKV..Q....GAVGILCANG..W........GMNIAEVVCRQ
ENSGGOP00000004640  ............a------LRLRE..GQSRCDGRVEVSL..D....GVWGRVLDDA..W........DLRGAGVVCRQ
ENSGGOP00000004637  ............a------LRLRE..GQSRCDGRVEVSL..D....GVWGRVLDDA..W........DLRGAGVVCRQ
ENSGGOP00000025344  ............y----TDVRLVN..GKSQCDGQVEINV..L....GHWGSLCDTH..W........DPEDARVLCRQ
ENSGGOP00000022120  ............l-----ELRLRG..GGSRCAGTVEVEI..Q....RLLGKVCDRG..W........GLKEADVVCRQ
ENSGGOP00000002772  ............h----GSVRLRG..GKNEFEGTVEVYA..S....GVWGTVCSSH..W........DDSDASVICHQ
ENSGGOP00000003108  ............g-----------..-------------..-....----------..-........DTNDANVVCRQ
ENSGGOP00000004640  ............e---SVALRLRG..GTCCCAGWLDVFY..N....GTWGAVCSNA..L........KDLSLSIICKQ
ENSGGOP00000022120  ............e---FMSLRLTSeaSREACAGRLEVFY..N....GAWGSVGKSS..M........SETTVGVVCRQ
ENSGGOP00000008487  ............e---HQSWRLTG..GADRCEGQVEVHF..R....GVWNTVCDSE..W........YPSEAKVLCQS
ENSGGOP00000025344  ...........ef----TALRLYSetETESCAGRLEVFY..N....GTWGSVGRRN..I........TTAIAGIVCRQ
ENSGGOP00000004703  ............n-----QVRLAG..GRIPEEGLLEVQV..EvngvPRWGSVCSEN..W........GLTEAMVACRQ
ENSGGOP00000027702  ............t-----RIRLSG..GRSQHEGRVEVQI..GgpgpLRWGLICGDD..W........GTLEAMVACRQ
ENSGGOP00000006200  ............t-----RIRLSG..GRSQHEGRVEVQI..GgpgpLRWGLICGDD..W........GTLEAMVACRQ
ENSGGOP00000013492  ............k------LRLNG..GRNPYEGRVEVLV..ErngsLVWGMVCGQN..W........GIVEAMVVCRQ
ENSGGOP00000027702  ............t-----------..-----EGLVEVRL..P....DGWSQVCDKG..W........SAHNSHVVCGM
ENSGGOP00000006200  ............t-----------..-----EGLVEVRL..P....DGWSQVCDKG..W........SAHNSHVVCGM
ENSGGOP00000004703  ...........sp-----------..---VTEGAVEVKY..E....GHWRQVCDQG..W........TMNNSRVVCGM
ENSGGOP00000013492  ............t-----------..-----EGYVEVKE..G....KTWKQICDKH..W........TAKNSRVVCGM
ENSGGOP00000026911  ............n----RCVRLYG..PNFI----LQVYS..Sqr..KSWHPVCQDD..W........NENYGRAACRD
ENSGGOP00000004741  ............n----RCVRLYG..PNFI----LQVYS..Sqr..KSWHPVCQDD..W........NENYGRAACRD
ENSGGOP00000007309  ............r-----PVRVSG..QNAV----LQVFT..A....ASWKTMCSDD..W........KGHYANVACAQ
ENSGGOP00000028487  ............l----GCVRFDW..DKSL----LKIYS..Gss..HQWLPICSSN..W........NDSYSEKTCQQ
ENSGGOP00000002708  ............l----GCVRFDW..DKSL----LKIYS..Gss..HQWLPICSSN..W........NDSYSEKTCQQ
ENSGGOP00000017262  ............s-----------..-------------..-....----------..-........-----------
ENSGGOP00000003316  ............g---KFSVSLKH..GITDSEGIVEVKLvdQ....DKTMFICKSS..W........SMREANVACLD
ENSGGOP00000018220  vsfrinsedflle-----------..--------VQVRD..R....PRWLLVCHEG..W........SPALGLQICWS
ENSGGOP00000008487  ............e---RLPVRLTN..GSSSCSGTVEVRL..E....ASWEPACGAL..W........DSRAAEAVCRA
ENSGGOP00000004640  ............f----RELRLVK..GRSPCAGLPEIRN..V....NGVDRLCG--..L........HVEEAMVFCRE
ENSGGOP00000004637  ............f----RELRLVK..GRSPCAGLPEIRN..V....NGVDRLCG--..L........HVEEAMVFCRE
ENSGGOP00000003384  ...........ns-----------..-------------..-....----------..-........DLAEATIVCHQ
ENSGGOP00000003384  .............------VKLAD..ERSQCKGHIEVYH..N....GTWGTVCDNL..W........GVNAAHMVCQQ
ENSGGOP00000006497  ............d--PDFQARLTR..SNSKCQGQLEVYI..K....DGWHMVCSQS..WgrsskqweDPSQASKVCQR
ENSGGOP00000026751  ............f----LPVRLSK..DRST----LQVLD..Sat..GNWFSACFDN..F........TEALAETACRQ
ENSGGOP00000002057  ...........vl------IRLSK..DRST----LQVLD..Sat..GNWFSACFDN..F........TEALAETACRQ
ENSGGOP00000006497  ............q--PKVQSRLVG..GSSICEGTVEVRQ..G....AQWAALCDSSsaR........SSLRWEEVCRE
ENSGGOP00000000602  ..........kkd-----------..----NNGLVQFRI..Q....SIWHTACAEN..W........TTQISNDVCQL
ENSGGOP00000004637  .............CSESVALRLRG..GTCCCAGWLDVFY..N....GTWGAVCSNA..L........KDLSLSIICKQ
ENSGGOP00000017866  ............h-----------..-------------..-....----HVCADG..W........QEMLSQLACKQ
ENSGGOP00000010871  ............h-----------..-------------..-....----HVCADG..W........QEMLSQLACKQ


                       50          60                                   70         80              9
                        |           |                                    |          |               
d1by2a_               LGFENATQAL..GRAAFGQGSG..........P.................IMLDEVQCTG.TEASLADCKS......L
ENSGGOP00000025344  LGCGVALNAT..VSAPFGEGSG..........P.................IWLDDLNCTG.TESHLWQCPS......R
ENSGGOP00000022120  LGCGEAINAT..GSAHFGEGTG..........P.................IWLDEMKCNG.KESRIWQCHS......H
ENSGGOP00000003108  LGCGWAMSAP..GNAWFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000017262  LGCGWAMSAP..GNARFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000017262  LGCGWAMSAP..GNARFGQGSG..........P.................IVLDDVRCSG.NESYLWSCPH......N
ENSGGOP00000003108  LGCGWAMSAP..GNARFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000017262  LGCGWAMSAP..GNARFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000003108  LGCGWAMSAP..GNARFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000017262  LGCGRATSAP..GNAWFGQGSG..........P.................IVLDDVRCSG.QESYLWSCPH......N
ENSGGOP00000003108  LGCGWATSAP..GNARFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000003108  LGCGRATSAP..GNAWFGQGSG..........P.................IVLDDVRCSG.QESYLWSCPH......N
ENSGGOP00000017262  LGCGWATSAP..GNARFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000017262  LGCGWATSAP..GNARFGQGSG..........P.................IVLDDVRCSG.YESYLWSCPH......N
ENSGGOP00000003108  LGCGWAMSAP..GNAQFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000003108  LGCGWATSAP..GNARFGQGSG..........P.................IVLDDVRCSG.YESYLWSCPH......N
ENSGGOP00000003108  LGCGWATSAP..GNARFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPN......N
ENSGGOP00000003108  LGCGWATSAP..GNARFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000017262  LGCGWAMSAP..GNAQFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000003384  LGCGLAVSAL..PGASFSPGSG..........S.................ILLDDVNCTG.RESSLGQCPH......S
ENSGGOP00000004640  LGCGRALSAL..GAAHFGAGAG..........R.................IWLDELGCQG.HESALWQCPS......A
ENSGGOP00000003108  LGCGRAVSAL..GNAYFGSGSG..........P.................ITLDDVECSG.TESTLWQCRN......R
ENSGGOP00000017262  LGCGRAVSAL..GNAYFGSGSG..........P.................ITLDDVECSG.TESTLWQCRN......R
ENSGGOP00000004637  LGCGRAVAAL..GAAAFGPGSG..........P.................VWLDEVGCRG.SEASLWGCPA......E
ENSGGOP00000003572  LGCGGALAAP..GGARFGPGAG..........P.................VWMDDVGCGG.GEQTLRDCPR......S
ENSGGOP00000025344  LGCGSALAAL..RDASFGQGTG..........T.................IWLDDMRCKG.NESFLWDCHA......K
ENSGGOP00000003384  LGCGQAIAAP..GKAHFGPGSG..........D.................ILLDNIQCSG.SENHLGQCPS......S
ENSGGOP00000005334  LGCGLALPVP..RPLAFGQGRG..........P.................ILLDNVECRG.QEAALSECGS......R
ENSGGOP00000003108  LGCGWAMSAP..GNARFGQGSG..........P.................IVLDDVRCSG.NESYLWSCPH......N
ENSGGOP00000022120  LECGSAVSFS..GSSNFGEGSG..........P.................IWFDDLICNG.NESALWNCKH......Q
ENSGGOP00000005334  LGCGQALAAP..GEAHFGPGRG..........P.................ILLDNVKCRG.EESALLLCSH......I
ENSGGOP00000022120  LGCGPALKAF..KEAEFGQGTG..........P.................IWLNEVKCKG.NESSLWDCPA......R
ENSGGOP00000003384  LGCGQAVSGP..GEAHFGPGSG..........D.................IFLDNLQCAG.VEHYLGQCTH......L
ENSGGOP00000005334  LGCGAAMAAT..TNAFFGYGTG..........H.................ILLDNVHCEG.GEPRLAACQS......L
ENSGGOP00000003384  LGCGRAMSAL..GKAHFGPGSG..........D.................IFLDNLQCAG.VERYLGQCTH......S
ENSGGOP00000003572  LGCGGALAAP..GGAFFGEGAG..........P.................VWLSELACRG.NEGQLGLCHH......R
ENSGGOP00000002772  LGLSGIAKAW..RQAYFGEGSG..........P.................VMLDEVRCTG.NELSIEQCPK......S
ENSGGOP00000003572  LGCGGALAAP..VGAFFGEGSG..........P.................IILDDLRCRG.NETALRFCPA......R
ENSGGOP00000003572  LGCGKVRPRV..GKTHYGPGTG..........P.................IWLDDMGCKG.SEASLSDCPS......G
ENSGGOP00000008133  LGFENATQAL..GRAAFGQGSG..........P.................IMLDEVQCMG.TEASLADCKS......L
ENSGGOP00000002772  LGYKGPARAR..TMAYFGEGKG..........P.................IHVDNVKCTG.NERSLADCIK......Q
ENSGGOP00000004640  LGCGRAVAAL..GAAAFGPGSG..........P.................VWLDEVGCRG.SEASLWGCPA......E
ENSGGOP00000005334  AGCGPALGAT..GLGHFGYGRG..........P.................VLLDNVGCAG.TEARLSDCFH......L
ENSGGOP00000025344  LGCGKPVHVF..GMTYFKEASG..........P.................IWLDDVSCIG.NESNIWDCEH......S
ENSGGOP00000003572  LGCGGPRQPDp.AAGRFGWGAG..........P.................IWLDDVGCVG.TEASLSDCPA......A
ENSGGOP00000003384  LQCGQAVAAP..TGAHFGAGSG..........K.................ILLDDMQCVG.SESHLGQCMH......G
ENSGGOP00000008487  LGCGWAVQAL..PGLHFTPGRG..........P.................IHRDQVNCSG.AEAYLWDCPG......L
ENSGGOP00000022120  LGCPTAITAI..GRVNASEGFG..........H.................IWLDSVSCQG.HEPAVWQCKH......H
ENSGGOP00000001829  LGFRGVEEVY..RTARFGQGTG..........R.................IWMDDVACKG.TEETIFRCSF......S
ENSGGOP00000025626  LGYPGVQAVH..KAAHFGQGTG..........P.................IWLNEVFCFG.RESSIEECKF......R
ENSGGOP00000018457  LGYPGVQAVH..KAAHFGQGTG..........P.................IWLNEVFCFG.RESSIEECKF......R
ENSGGOP00000025344  LGCPFSFAMF..RFGQAVTRHG..........K.................IWLDDVSCYG.NESALWECQH......R
ENSGGOP00000004703  LGFEAALTWA..HSAKYGQGEG..........P.................IWLDNVRCAG.TESSLDQCGS......N
ENSGGOP00000013492  LGYVEAKSWT..ASSSYGKGEG..........P.................IWLDNLHCTG.NEATLAACTS......N
ENSGGOP00000025344  LGCPSSFISS..GVVNSPAVLR..........P.................IWLDDILCQG.NELALWNCRH......R
ENSGGOP00000022120  LGCPTAIKAT..GWANSSAGSG..........R.................IWMDHVSCRG.NESALWDCKH......D
ENSGGOP00000025344  LDCPSSIIGM..GLGNASTGYG..........K.................IWLDDVSCDG.DESDLWSCRN......S
ENSGGOP00000003384  LQCGQAVAAP..TGAHFGAGSG..........K.................ILLDDVQCVG.SKSHLGQCVH......G
ENSGGOP00000027702  LGFGSAREAL..SGARMGQGMG..........A.................IHLSEVRCSG.QELSLWKCPH......K
ENSGGOP00000006200  LGFGSAREAL..SGARMGQGMG..........A.................IHLSEVRCSG.QELSLWKCPH......K
ENSGGOP00000008535  LGCGKSLSPSfrNRKSYGPGVG..........R.................IWLDNVRCSG.EEQSLEQCKH......R
ENSGGOP00000003384  LGCGR-----..---AFGQGSG..........P.................ILLDDVRCTG.HEDELERCTH......S
ENSGGOP00000007976  LGFAYAVRAV..KRAEFGQGGSl.........P.................ILLDDVRCTG.WERNLLECQH......N
ENSGGOP00000026333  LGFAYAVRAV..KRAEFGQGGSl.........P.................ILLDDVRCTG.WERNLLECQH......N
ENSGGOP00000025344  LGCGTALHFA..GLPHLQSGSD..........V.................VWLDGVSCSG.NESFLWDCRH......S
ENSGGOP00000002772  LGFKYGKQAS..AN-HFEESTG..........P.................IWLDDVSCSG.KETRFLQCSR......R
ENSGGOP00000022120  LQCGTVVSIL..GGAHFGEGNG..........Q.................IWAEEFQCEG.HESHLSLCPV......A
ENSGGOP00000013492  LGFGSAKEAV..TGSRLGQGIG..........P.................IHLNEIQCTG.NEKSIIDCKF......N
ENSGGOP00000027702  LGFTEATGWT..HSAKYGPGTG..........R.................IWLDNLSCSG.TEQRVTECAS......R
ENSGGOP00000006200  LGFTEATGWT..HSAKYGPGTG..........R.................IWLDNLSCSG.TEQRVTECAS......R
ENSGGOP00000008535  LGCGRAVLTQk.RCNKHAYGRK..........P.................IWLSQMSCSG.REATLQDCPS......G
ENSGGOP00000003384  LQCGQAVAAP..VGAHFGASSG..........K.................VLLDDMQCVG.SKSHLGRCVR......R
ENSGGOP00000004703  LGFGSAREAL..FGARLGQGLG..........P.................IHLSEVRCRG.YERTLSDCPA......L
ENSGGOP00000004637  LGCGRALSAL..GAAHFGAGAG..........R.................IWLDELGCQG.HESALWQCPS......A
ENSGGOP00000022120  LKCGVALSTP..GGAHFGKGNG..........Q.................VWRHMFHCTG.TEQHMGDCPV......T
ENSGGOP00000004640  LNCGNAVAAP..GGGHFGDGDA..........A.................IWPDAFHCEG.TEPYLWNCPV......S
ENSGGOP00000004637  LNCGNAVAAP..GGGHFGDGDA..........A.................IWPDAFHCEG.TEPYLWNCPV......S
ENSGGOP00000008535  LGCGAASGTP..SGILYEPPAEkeq.......K.................VLIQSVSCTG.TEDTLAQCEQ......E
ENSGGOP00000004637  LQCGAVVSTP..KGARFGRGLG..........P.................VWTEAFRCAG.NESLLFHCPR......G
ENSGGOP00000004640  LQCGAVVSTP..KGARFGRGLG..........P.................VWTEAFRCAG.NESLLFHCPR......G
ENSGGOP00000015205  LGYSKGRALY..K---VGAGTG..........Q.................IWLDNVQCRG.TESTLWSCIK......N
ENSGGOP00000025344  LNCGDAISLS..VGDHFGKGNG..........L.................TWAEKFQCEG.SETHLALCPI......V
ENSGGOP00000025344  LGCPFSVFGS..RRAKPSNEAR..........D.................IWINSISCTG.NESALWDCTY......D
ENSGGOP00000004640  LGCGPAVGAP..KYVPLPGEMA..........Q.................PWLHNVSCRG.NESSLWECSL......G
ENSGGOP00000004637  LGCGPAVGAP..KYVPLPGEMA..........Q.................PWLHNVSCRG.NESSLWECSL......G
ENSGGOP00000025344  LECGSAIRVS..REPHFTERTL..........H.................ILMSNSGCTG.GEASLWDCIR......W
ENSGGOP00000004640  LGCGGAEQAY..DAPAPSRGSV..........Q.................VALSRVRCLG.TETRLTQCNV......S
ENSGGOP00000004637  LGCGGAEQAY..DAPAPSRGSV..........Q.................VALSRVRCLG.TETRLTQCNV......S
ENSGGOP00000025344  LSCGTALSTT..GGKYIGERSV..........R.................VWGHRFHCLG.NESLLDNCQM......T
ENSGGOP00000022120  LGCGSALKTS..YQVYSKIQAT..........N.................TWLFLSSCNG.NETSLWDCKN......W
ENSGGOP00000002772  LQLGGKGIAK..QTPFSGLGLI..........P.................VYWSNVRCRG.DEENILLCEK......D
ENSGGOP00000003108  LGCGWATSAP..GNARFGQGSG..........P.................IVLDDVRCSG.QESYLWSCPH......N
ENSGGOP00000004640  LGCGEWGWLE..NRPFPSAGTG..........T.................AWVDNIECRRlPNSTLWQCPS......H
ENSGGOP00000022120  LGCADKGKIN..PASLDKAMSI..........P.................MWVDNVQCPK.GPDTLWQCPS......S
ENSGGOP00000008487  LGCGTAVERP..KGLPHSLSGR..........-.................---MYYSCNG.EELTLSNCSW......R
ENSGGOP00000025344  LGCGENGVVS..LAPLSKTGSG..........F.................MWVDDIQCPK.THISIWQCLS......A
ENSGGOP00000004703  LGLGFAIHAY..KETWFWSGTPraq.......Q.................VVMSGVRCSG.TELALQQCQR......H
ENSGGOP00000027702  LGLGYANHGL..QETWYWDSGNit........E.................VVMSGVRCTG.TELSLDQCAH......H
ENSGGOP00000006200  LGLGYANHGL..QETWYWDSGNit........E.................VVMSGVRCTG.TELSLDQCAH......H
ENSGGOP00000013492  LGLGFASNAF..QETWYWHGDVnsn.......K.................VVMSGVKCSG.TELSLAHCRH......D
ENSGGOP00000027702  LGFPSEKRVN..AAFYRLLAQRqqh.......S.................FGLHGVACVG.TEAHLSLCSL......E
ENSGGOP00000006200  LGFPSEKRVN..AAFYRLLAQRqqh.......S.................FGLHGVACVG.TEAHLSLCSL......E
ENSGGOP00000004703  LGFPSEVPVD..SHYYRKVWDL..........Kmrdpksrlksltnkns.FWIHQVTCLG.TEPHMANCQVqvapa.R
ENSGGOP00000013492  FGFPGERTYN..TKVYKMFASRrkq.......R.................YWPFSMDCTG.TEAHISSCKLgpqvslD
ENSGGOP00000026911  MGYKNNFYSS..QGIVDDSGST..........S.................FMKLNTSAGN.VDIY-----K......K
ENSGGOP00000004741  MGYKNNFYSS..QGIVDDSGST..........S.................FMKLNTSAGN.VDIY-----K......K
ENSGGOP00000007309  LGFPSYVSSD..N---------..........-.................----------.----------......-
ENSGGOP00000028487  LGFESAYRTT..EVAHRDFANS..........F.................SILRYNSTIQ.ESLHRSECPS......Q
ENSGGOP00000002708  LGFESAYRTT..EVAHRDFANS..........F.................SILRYNSTIQ.ESLHRSECPS......Q
ENSGGOP00000017262  --------AP..GNAWFGQGSG..........P.................IVLDDVRCSG.HESYLWSCPH......N
ENSGGOP00000003316  LGFQQGADTQ..RRFKLSDLSIn.........S.................TECLHVHCRG.LETSLAECTF......T
ENSGGOP00000018220  LGHLRLTHHK..GVNLTDIKLN..........SsqefaqlsprlggfleeAWQPRNNC--.----------......-
ENSGGOP00000008487  LGCGGAEAAS..QLALPTPELP..........Pppaagntsaaanatl..AGAPALLCSG.AEWRLCE---......-
ENSGGOP00000004640  LGCGPVLQAP..RRDV------..........G.................VVRKYLACRG.TEPTIRSCRL......D
ENSGGOP00000004637  LGCGPVLQAP..RRDV------..........G.................VVRKYLACRG.TEPTIRSCRL......D
ENSGGOP00000003384  LQCGQAMAAR..IRDHFWPGSR..........K.................ILLDDLQHVG.SESHLGQCVH......R
ENSGGOP00000003384  LGCGEGVGHP..REWP------..........-.................----------.----------......-
ENSGGOP00000006497  LNCGVPLSLG..PFLATHTPQS..........-.................----SIICYG.HLGSFSNCSH......S
ENSGGOP00000026751  MGYSSKPT--..----------..........-.................----------.----------......-
ENSGGOP00000002057  MGYSSKPT--..----------..........-.................----------.----------......-
ENSGGOP00000006497  QQCGSVNSYR..VPDAGDPTSR..........-.................----GLFCPH.--QKLSQCHE......L
ENSGGOP00000000602  LGLGSGNSSM..PIFSTDGGPFvklntapdghL.................ILTPSQQCLQ.DSLIRLQCNL......K
ENSGGOP00000004637  ----------..----------..........-.................----------.----------......-
ENSGGOP00000017866  MGLGEPSVTK..LIQ-------..........-.................----------.----------......-
ENSGGOP00000010871  MGLGEPSVTK..LIQ-------..........-.................----------.----------......-


                      0          100          110                                                   
                      |            |            |                                                   
d1by2a_               GWLKSN...CRHERD...AGVVCTNETR-----sthtl........................................
ENSGGOP00000025344  GWGQHD...CRHKED...AGVICSEFT------alr..........................................
ENSGGOP00000022120  GWGQQN...CRHKED...AGVICSEFM------sl...........................................
ENSGGOP00000003108  GWLSHN...CGHGED...AGVICSA--------aq...........................................
ENSGGOP00000017262  GWLSHN...CGHGED...AGVICS---------as...........................................
ENSGGOP00000017262  GWLSHN...CGHGED...AGVICS---------.............................................
ENSGGOP00000003108  GWLSHN...CGHGED...AGVICS---------as...........................................
ENSGGOP00000017262  GWLTHN...CGHSED...AGVICSG--------sw...........................................
ENSGGOP00000003108  GWLTHN...CGHSED...AGVICS---------at...........................................
ENSGGOP00000017262  GWLSHN...CGHHED...AGVICS---------.............................................
ENSGGOP00000003108  GWLSHN...CGHGED...AGVICS---------as...........................................
ENSGGOP00000003108  GWLSHN...CGHHED...AGVICS---------.............................................
ENSGGOP00000017262  GWLSHN...CGHHED...AGVICSG--------s............................................
ENSGGOP00000017262  GWLSHN...CQHSED...AGVICS---------a............................................
ENSGGOP00000003108  GWLTHN...CGHSED...AGVICS---------aa...........................................
ENSGGOP00000003108  GWLSHN...CQHSED...AGVICS---------a............................................
ENSGGOP00000003108  GWLSHN...CGHHED...AGVVCSP--------aq...........................................
ENSGGOP00000003108  GWLSHN...CGHHED...AGVICSA--------sq...........................................
ENSGGOP00000017262  GWLTHN...CGHSED...AGVICS---------.............................................
ENSGGOP00000003384  GWYTHN...CGHHED...AGVICL---------a............................................
ENSGGOP00000004640  GWGRHD...CRHKED...AGVFCSE--------s............................................
ENSGGOP00000003108  GWFSHN...CNHRED...AGVICSGN-------ql...........................................
ENSGGOP00000017262  GWFSHN...CNHRED...AGVICSGM-------a............................................
ENSGGOP00000004637  RWGRGD...CAHKED...AGVRCWE--------p............................................
ENSGGOP00000003572  PWGRSN...CDHSED...AGLVCTGP-------a............................................
ENSGGOP00000025344  PWGQSD...CGHKED...AGVRCSG--------q............................................
ENSGGOP00000003384  GWSDHN...RGHHED...ANVVCSG--------kk...........................................
ENSGGOP00000005334  GWGVHN...CFHYED...VAVLCDE--------flp..........................................
ENSGGOP00000003108  GWLSHN...CGHGED...AGVICSG--------p............................................
ENSGGOP00000022120  GWGKHN...CDHAED...AGVICSK--------g............................................
ENSGGOP00000005334  RWDAHN...CDHSED...ASVLCQ---------p............................................
ENSGGOP00000022120  RWGHNE...CGHKED...AAVNCTH--------i............................................
ENSGGOP00000003384  GWSEHN...CGHHED...ASVICSEL-------tq...........................................
ENSGGOP00000005334  GWGVHN...CGHHED...AGALCAG--------lg...........................................
ENSGGOP00000003384  GWSEHN...CGHHED...ASVICS---------a............................................
ENSGGOP00000003572  GWKAHI...CSHEED...AGVVCAG--------qr...........................................
ENSGGOP00000002772  SWGEHN...CGHKED...AGVSCTP--------l............................................
ENSGGOP00000003572  PWGQHD...CHHRED...AGAVCDG--------mp...........................................
ENSGGOP00000003572  AWGKHN...CDHEED...VGLTCTGY-------td...........................................
ENSGGOP00000008133  GWLKSN...CRHERD...AGVVCTNE-------tr...........................................
ENSGGOP00000002772  DIGRHN...CRHSED...AGVIC----------.............................................
ENSGGOP00000004640  RWGRGD...CAHKED...AGVRCW---------.............................................
ENSGGOP00000005334  GWGQHN...CGHHED...AGALCAG--------p............................................
ENSGGOP00000025344  GWGKHN...CVHRED...VIVTCSG--------na...........................................
ENSGGOP00000003572  PWGKHN...CAHNED...VGVTCTG--------p............................................
ENSGGOP00000003384  DQARHN...CGHLED...ASVICT---------.............................................
ENSGGOP00000008487  P-GQHY...CGHKED...AGVVCSEH-------q............................................
ENSGGOP00000022120  EWGKHY...CNHNED...AGVTCSD--------g............................................
ENSGGOP00000001829  KWGVTN...CGHAED...ASVTC----------n............................................
ENSGGOP00000025626  QWGTRA...CSHSED...AGVTCT---------.............................................
ENSGGOP00000018457  QWGTRA...CSHSED...AGVTCT---------.............................................
ENSGGOP00000025344  EWGSHN...CYHGED...VGVNCYGK-------sl...........................................
ENSGGOP00000004703  GWGVSD...CSHSED...VGVICHP--------rr...........................................
ENSGGOP00000013492  GWGVTD...CKHTED...VGVVCSD--------kr...........................................
ENSGGOP00000025344  GWGNHD...CSHNED...VTLACYD--------s............................................
ENSGGOP00000022120  GWGKHSn..CTHQQD...AGVTCSD--------g............................................
ENSGGOP00000025344  GWGNND...CSHSED...VGVICSD--------as...........................................
ENSGGOP00000003384  GRARHN...CGHLED...ASVICS---------ar...........................................
ENSGGOP00000027702  NITAED...CSHSQD...AGVRC----------n............................................
ENSGGOP00000006200  NITAED...CSHSQD...AGVRC----------n............................................
ENSGGOP00000008535  FWGFHD...CTHQED...VAVFCSG--------.............................................
ENSGGOP00000003384  GWARHN...CQHRED...AGVVC----------a............................................
ENSGGOP00000007976  GVGTHN...CEHDED...AGVVCSH--------qn...........................................
ENSGGOP00000026333  GVGTHN...CEHDED...AGVVCSH--------qn...........................................
ENSGGOP00000025344  GTVNFD...CLHQND...VSVICSD--------ga...........................................
ENSGGOP00000002772  QWGRHD...CSHRED...VSIACYP--------.............................................
ENSGGOP00000022120  PRPEGT...CSHSRD...VGVVCSR--------y............................................
ENSGGOP00000013492  A-ESQG...CNHEED...AGVRCN---------tp...........................................
ENSGGOP00000027702  GWGNSD...CTHDED...AGVICKD--------qr...........................................
ENSGGOP00000006200  GWGNSD...CTHDED...AGVICKD--------qr...........................................
ENSGGOP00000008535  PWGKNT...CNHDED...TWVECED--------p............................................
ENSGGOP00000003384  GWARHN...CGHLED...ASVI-----------.............................................
ENSGGOP00000004703  EGSQNG...CQHEND...AAVRC----------n............................................
ENSGGOP00000004637  GWGRHD...CRHKED...AGVFCSE--------s............................................
ENSGGOP00000022120  ALGASL...CPSEQV...ASVICSGN-------qs...........................................
ENSGGOP00000004640  TLGAPA...CAPGNT...ASAVCSGL-------ph...........................................
ENSGGOP00000004637  TLGAPA...CAPGNT...ASAVCSGL-------ph...........................................
ENSGGOP00000008535  --EVYD...CSHDED...AGASCEN--------p............................................
ENSGGOP00000004637  --RGSQ...CGHGHD...AGLRCSE--------f............................................
ENSGGOP00000004640  --RGSQ...CGHGHD...AGLRCSE--------.............................................
ENSGGOP00000015205  SWGYHD...CSHEED...AGVECS---------.............................................
ENSGGOP00000025344  QHPEDT...CIHSRE...VGVVCSR--------y............................................
ENSGGOP00000025344  GKAKRT...CFRRSD...AGVICSD--------k............................................
ENSGGOP00000004640  SWCQSP...CPHAWV...VVALCSH--------g............................................
ENSGGOP00000004637  SWCQSP...CPHAWV...VVALCSH--------g............................................
ENSGGOP00000025344  EWKQTA...CHLNME...ASLICSA--------hr...........................................
ENSGGOP00000004640  ATLQEP...AGTSRD...AGVVCSG--------.............................................
ENSGGOP00000004637  ATLQEP...AGTSRD...AGVVCSG--------.............................................
ENSGGOP00000025344  VLGAPP...CIHGNT...VSVICTG--------s............................................
ENSGGOP00000022120  QWGGLT...CDHYEE...AKITCSA--------h............................................
ENSGGOP00000002772  IWQGGV...CPQKMA...AAVTCS---------.............................................
ENSGGOP00000003108  GWLSHN...CGHHED...AGVICS---------a............................................
ENSGGOP00000004640  PWHPHS...CDLREQ...VWITCAG--------ls...........................................
ENSGGOP00000022120  PWEKRL...ASPSEE...TWITC----------dn...........................................
ENSGGOP00000008487  FNNSNL...CSQSLA...ARVLCSA--------sr...........................................
ENSGGOP00000025344  PWERRI...SSPAEE...TWITCE---------d............................................
ENSGGOP00000004703  --GPVH...CSHGGGrflAGVSCMDSAP-----dlv..........................................
ENSGGOP00000027702  GTHITCkr.TGTRFT...AGVICSET-------asd..........................................
ENSGGOP00000006200  GTHITCkr.TGTRFT...AGVICSET-------asd..........................................
ENSGGOP00000013492  GEDVACpq.GGVQYG...AGVACSETAP-----dl...........................................
ENSGGOP00000027702  FYRANDtarCPGGAP...AVVSCVP--------.............................................
ENSGGOP00000006200  FYRANDtarCPGGAP...AVVSCVP--------.............................................
ENSGGOP00000004703  GKLRPA...CPGGMH...AVVSCVAGPH-----fr...........................................
ENSGGOP00000013492  PMKNVT...CENGLP...AVVSCVP--------.............................................
ENSGGOP00000026911  LYHSDA...CSSKAV...VSLRCI---------acgvn........................................
ENSGGOP00000004741  LYHSDA...CSSKAV...VSLRCI---------acgvn........................................
ENSGGOP00000007309  ------...------...---------------lrvsllegqfreefvsinhllpddkvtalhhsvyvregcasghvv
ENSGGOP00000028487  RYISLQ...CSHC--...---------------glr..........................................
ENSGGOP00000002708  RYISLQ...CSHC--...---------------glr..........................................
ENSGGOP00000017262  GWLSHN...CGHGED...AGVICSA--------aq...........................................
ENSGGOP00000003316  --KRRT...MGYQDL...ADVVCYT--------qka..........................................
ENSGGOP00000018220  ------...-TSGRV...VSLRCS---------ecgarp.......................................
ENSGGOP00000008487  VVEHAC...RSDGRR...ARVTCAE--------n............................................
ENSGGOP00000004640  NNFRSG...CDLRLD...AEVICSGH-------t............................................
ENSGGOP00000004637  NNFRSG...CDLRLD...AEVICSGH-------t............................................
ENSGGOP00000003384  SWTRHN...CGHLEN...ASIICT---------t............................................
ENSGGOP00000003384  ------...------...---------------lgcrg........................................
ENSGGOP00000006497  RND---...--MCHS...LGLTCLEPQ------ktt..........................................
ENSGGOP00000026751  ------...------...---------------fraveigpdqdldvveitensqelhmrnssgpclsgslvslhcla
ENSGGOP00000002057  ------...------...---------------fraveigpdqdldvveitensqelhmrnssgpclsgslvslhcla
ENSGGOP00000006497  WERNSY...CK---K...VFVTCQDPN------pa...........................................
ENSGGOP00000000602  SC----...------...---------------gk...........................................
ENSGGOP00000004637  ------...------...---------------g............................................
ENSGGOP00000017866  ------...------...---------------eqekeprwltlhsnweslngttlheflvngqscesrskisllctk
ENSGGOP00000010871  ------...------...---------------eqekeprwltlhsnweslngttlheflvngqscesrskisllctk


                                
                                
d1by2a_               ..........
ENSGGOP00000025344  ..........
ENSGGOP00000022120  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000017262  ..........
ENSGGOP00000017262  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000017262  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000017262  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000017262  ..........
ENSGGOP00000017262  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000017262  ..........
ENSGGOP00000003384  ..........
ENSGGOP00000004640  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000017262  ..........
ENSGGOP00000004637  ..........
ENSGGOP00000003572  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000003384  ..........
ENSGGOP00000005334  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000022120  ..........
ENSGGOP00000005334  ..........
ENSGGOP00000022120  ..........
ENSGGOP00000003384  ..........
ENSGGOP00000005334  ..........
ENSGGOP00000003384  ..........
ENSGGOP00000003572  ..........
ENSGGOP00000002772  ..........
ENSGGOP00000003572  ..........
ENSGGOP00000003572  ..........
ENSGGOP00000008133  ..........
ENSGGOP00000002772  ..........
ENSGGOP00000004640  ..........
ENSGGOP00000005334  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000003572  ..........
ENSGGOP00000003384  ..........
ENSGGOP00000008487  ..........
ENSGGOP00000022120  ..........
ENSGGOP00000001829  ..........
ENSGGOP00000025626  ..........
ENSGGOP00000018457  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000004703  ..........
ENSGGOP00000013492  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000022120  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000003384  ..........
ENSGGOP00000027702  ..........
ENSGGOP00000006200  ..........
ENSGGOP00000008535  ..........
ENSGGOP00000003384  ..........
ENSGGOP00000007976  ..........
ENSGGOP00000026333  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000002772  ..........
ENSGGOP00000022120  ..........
ENSGGOP00000013492  ..........
ENSGGOP00000027702  ..........
ENSGGOP00000006200  ..........
ENSGGOP00000008535  ..........
ENSGGOP00000003384  ..........
ENSGGOP00000004703  ..........
ENSGGOP00000004637  ..........
ENSGGOP00000022120  ..........
ENSGGOP00000004640  ..........
ENSGGOP00000004637  ..........
ENSGGOP00000008535  ..........
ENSGGOP00000004637  ..........
ENSGGOP00000004640  ..........
ENSGGOP00000015205  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000004640  ..........
ENSGGOP00000004637  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000004640  ..........
ENSGGOP00000004637  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000022120  ..........
ENSGGOP00000002772  ..........
ENSGGOP00000003108  ..........
ENSGGOP00000004640  ..........
ENSGGOP00000022120  ..........
ENSGGOP00000008487  ..........
ENSGGOP00000025344  ..........
ENSGGOP00000004703  ..........
ENSGGOP00000027702  ..........
ENSGGOP00000006200  ..........
ENSGGOP00000013492  ..........
ENSGGOP00000027702  ..........
ENSGGOP00000006200  ..........
ENSGGOP00000004703  ..........
ENSGGOP00000013492  ..........
ENSGGOP00000026911  ..........
ENSGGOP00000004741  ..........
ENSGGOP00000007309  tlqctacghr
ENSGGOP00000028487  ..........
ENSGGOP00000002708  ..........
ENSGGOP00000017262  ..........
ENSGGOP00000003316  ..........
ENSGGOP00000018220  ..........
ENSGGOP00000008487  ..........
ENSGGOP00000004640  ..........
ENSGGOP00000004637  ..........
ENSGGOP00000003384  ..........
ENSGGOP00000003384  ..........
ENSGGOP00000006497  ..........
ENSGGOP00000026751  cges......
ENSGGOP00000002057  cges......
ENSGGOP00000006497  ..........
ENSGGOP00000000602  ..........
ENSGGOP00000004637  ..........
ENSGGOP00000017866  qdc.......
ENSGGOP00000010871  qdc.......


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Refine alignments

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Members of the same: including
Include all superfamily members: , or just those assigned by the selected model:
Initial T99 seed sequence: NoYes

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Upload a multiple sequence FASTA file:




Model: 0035772 (list models)
Initial SAMT99 seed:
Alignment:



Display Options:
Output in FASTA-like format: NoYes
Output column indices: NoYes
Sequence index (number) on each line: NoYes

Max number of insertions shown: (0 does not show insertions)
Characters per line:
Character to show inserts:
Maximum number of sequences:
Exclude sequences shorter than: residues



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Add alignments from genomes

Select below additional genomes you would like to see alignments for, then click on 'Re-Submit'. The genome assignments will be added to this page.


Select to display   Genome
NoYes   Canis familiaris 58 (pseudogenes) - Dog
NoYes   Danio rerio 58 (pseudogenes) - Zebrafish
NoYes   Gallus gallus 58 (pseudogene) - Chicken
NoYes   Homo sapiens 58 (pseudogenes) - Human
NoYes   Mus musculus 56 (pseudogenes) - House mouse
NoYes   Pan troglodytes 58 (pseudogenes) - Chimpanzee
NoYes   Rattus norvegicus 58 (pseudogenes) - Norway rat
NoYes   Homo sapiens 76_38 - Human
NoYes   Pan troglodytes 76_2.1.4 - Chimpanzee
NoYes   Gorilla gorilla 76_3.1 - Western gorilla
NoYes   Pongo abelii 76_2 - Sumatran orangutan
NoYes   Tarsius syrichta 76_1
NoYes   Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbon
NoYes   Papio anubis 76 - Olive baboon
NoYes   Macaca mulatta 76_1 - Rhesus monkey
NoYes   Callithrix jacchus 76_3.2.1 - White-tufted-ear marmoset
NoYes   Otolemur garnettii 76_3 - Small-eared galago
NoYes   Microcebus murinus 76_1 - Gray mouse lemur
NoYes   Rattus norvegicus 76_5.0 - Norway rat
NoYes   Mus musculus 76_38 - House mouse
NoYes   Dipodomys ordii 76_1 - Ord's kangaroo rat
NoYes   Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrel
NoYes   Heterocephalus glaber v1.7-2 - Naked mole-rat
NoYes   Cavia porcellus 76_3 - Domestic guinea pig
NoYes   Oryctolagus cuniculus 76_2 - Rabbit
NoYes   Ochotona princeps 76 - American pika
NoYes   Tupaia belangeri 76 - Northern tree shrew
NoYes   Sus scrofa 76_10.2 - Pig
NoYes   Bos taurus 76_3.1 - Cattle
NoYes   Ovis aries 76_3.1 - Sheep
NoYes   Vicugna pacos 76_1 - Alpaca
NoYes   Tursiops truncatus 76_1 - Bottlenose dolphin
NoYes   Mustela putorius furo 76_1.0 - Domestic ferret
NoYes   Ailuropoda melanoleuca 76_1 - Giant panda
NoYes   Canis familiaris 76_3.1 - Dog
NoYes   Felis catus 76_6.2 - Domestic cat
NoYes   Equus caballus 76_2 - Horse
NoYes   Myotis lucifugus 76_2.0 - Little brown bat
NoYes   Pteropus vampyrus 76_1 - Large flying fox
NoYes   Sorex araneus 76_1 - European shrew
NoYes   Erinaceus europaeus 76 - Western European hedgehog
NoYes   Procavia capensis 76_1 - Cape rock hyrax
NoYes   Loxodonta africana 76_3 - African savanna elephant
NoYes   Echinops telfairi 76 - Small Madagascar hedgehog
NoYes   Dasypus novemcinctus 76_2 - Nine-banded armadillo
NoYes   Choloepus hoffmanni 76_1 - Hoffmann's two-fingered sloth
NoYes   Macropus eugenii 76_1.0 - Tammar wallaby
NoYes   Sarcophilus harrisii 76_7.0 - Tasmanian devil
NoYes   Monodelphis domestica 76_5 - Gray short-tailed opossum
NoYes   Ornithorhynchus anatinus 76_5 - Platypus
NoYes   Saccoglossus kowalevskii v3.0
NoYes   Petromyzon marinus 76_7.0 - Sea lamprey
NoYes   Meleagris gallopavo 76_2 - Turkey
NoYes   Gallus gallus 76_4 - Chicken
NoYes   Anas platyrhynchos 76_1.0 - Mallard
NoYes   Taeniopygia guttata 76_3.2.4 - Zebra finch
NoYes   Ficedula albicollis 76_1.0 - Collared flycatcher
NoYes   Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtle
NoYes   Anolis carolinensis 76_2.0 - Green anole
NoYes   Xenopus laevis - African clawed frog
NoYes   Xenopus tropicalis 76_4.2 - Tropical clawed frog
NoYes   Latimeria chalumnae 76_1 - Coelacanth
NoYes   Lepisosteus oculatus 76 - Spotted gar
NoYes   Gadus morhua 76_1 - Atlantic cod
NoYes   Tetraodon nigroviridis 76_8 - Spotted green pufferfish
NoYes   Takifugu rubripes 76_4 - Torafugu
NoYes   Gasterosteus aculeatus 76_1 - Three-spined stickleback
NoYes   Oryzias latipes 76_1 - Japanese medaka
NoYes   Xiphophorus maculatus 76_4.4.2 - Southern platyfish
NoYes   Poecilia formosa 76 - Amazon molly
NoYes   Oreochromis niloticus 76_1.0 - Nile tilapia
NoYes   Astyanax mexicanus 76 - Mexican tetra
NoYes   Danio rerio 76_9 - Zebrafish
NoYes   Oikopleura dioica
NoYes   Ciona savignyi 76_2.0 - Pacific transparent sea squirt
NoYes   Ciona intestinalis 76 - Vase tunicate
NoYes   Strongylocentrotus purpuratus v3.1 - Purple sea urchin
NoYes   Adineta vaga
NoYes   Octopus bimaculoides 280
NoYes   Crassostrea gigas 22 - Pacific oyster
NoYes   Lottia gigantea - Owl limpet
NoYes   Helobdella robusta
NoYes   Capitella sp. I
NoYes   Danaus plexippus OGS1.0 - Monarch butterfly
NoYes   Heliconius melpomene - Postman butterfly
NoYes   Bombyx mori - Domestic silkworm
NoYes   Nasonia vitripennis - Jewel wasp
NoYes   Apis mellifera 38.2d - Honey bee
NoYes   Harpegnathos saltator v3.3 - Jerdon's jumping ant
NoYes   Linepithema humile v1.1 - Argentine ant
NoYes   Pogonomyrmex barbatus v1.2 - Red harvester ant
NoYes   Solenopsis invicta v.2.2.3 - Red fire ant
NoYes   Acromyrmex echinatior v3.8 - Panamanian leafcutter ant
NoYes   Atta cephalotes v1.1
NoYes   Camponotus floridanus v3.3 - Florida carpenter ant
NoYes   Lucilia cuprina - Australian sheep blowfly
NoYes   Drosophila grimshawi 1.3
NoYes   Drosophila willistoni 1.3
NoYes   Drosophila pseudoobscura 2.13
NoYes   Drosophila persimilis 1.3
NoYes   Drosophila suzukii
NoYes   Drosophila yakuba 1.3
NoYes   Drosophila simulans 1.3
NoYes   Drosophila sechellia 1.3
NoYes   Drosophila melanogaster 76_5 - Fruit fly
NoYes   Drosophila erecta 1.3
NoYes   Drosophila ananassae 1.3
NoYes   Drosophila virilis 1.2
NoYes   Drosophila mojavensis 1.3
NoYes   Megaselia scalaris 22
NoYes   Aedes aegypti 55 - Yellow fever mosquito
NoYes   Culex pipiens quinquefasciatus - Southern house mosquito
NoYes   Anopheles darlingi 22 - American malaria mosquito
NoYes   Anopheles gambiae 49_3j - African malaria mosquito
NoYes   Tribolium castaneum 3.0 - Red flour beetle
NoYes   Pediculus humanus corporis - Human body louse
NoYes   Acyrthosiphon pisum - Pea aphid
NoYes   Rhodnius prolixus 22
NoYes   Daphnia pulex - Common water flea
NoYes   Strigamia maritima 22
NoYes   Sarcoptes scabiei
NoYes   Tetranychus urticae - Two-spotted spider mite
NoYes   Ixodes scapularis - Black-legged tick
NoYes   Pristionchus pacificus
NoYes   Meloidogyne hapla
NoYes   Onchocerca volvulus 22
NoYes   Brugia malayi WS250 - Agent of lymphatic filariasis
NoYes   Caenorhabditis japonica
NoYes   Caenorhabditis brenneri
NoYes   Caenorhabditis remanei
NoYes   Caenorhabditis elegans 76_235 - Roundworm
NoYes   Caenorhabditis briggsae 2
NoYes   Trichinella spiralis 22
NoYes   Hymenolepis microstoma
NoYes   Echinococcus multilocularis
NoYes   Echinococcus granulosus
NoYes   Taenia solium - Pork tapeworm
NoYes   Schistosoma mansoni
NoYes   Mnemiopsis leidyi - Sea walnut
NoYes   Acropora digitifera v1.0
NoYes   Nematostella vectensis 1.0 - Starlet sea anemone
NoYes   Hydra vulgaris
NoYes   Amphimedon queenslandica
NoYes   Trichoplax adhaerens
NoYes   Chlorella variabilis sp. NC64A
NoYes   Volvox carteri f. nagariensis
NoYes   Volvox carteri v199
NoYes   Chlamydomonas reinhardtii 4.0
NoYes   Bigelowiella natans CCMP2755 22
NoYes   Cyanophora paradoxa
NoYes   Aureococcus anophagefferens
NoYes   Cryptosporidium hominis
NoYes   Cryptosporidium muris
NoYes   Cryptosporidium parvum Iowa II
NoYes   Neospora caninum
NoYes   Toxoplasma gondii VEG
NoYes   Toxoplasma gondii ME49
NoYes   Toxoplasma gondii GT1
NoYes   Babesia bovis T2Bo
NoYes   Theileria parva
NoYes   Theileria annulata
NoYes   Plasmodium falciparum 3D7
NoYes   Plasmodium vivax SaI-1 7.0
NoYes   Plasmodium knowlesi strain H
NoYes   Plasmodium yoelii ssp. yoelii 1
NoYes   Plasmodium chabaudi
NoYes   Plasmodium berghei ANKA
NoYes   Symbiodinium minutum clade B1 v1.2
NoYes   Guillardia theta CCMP2712 v1.0
NoYes   Emiliania huxleyi CCMP1516
NoYes   Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frog
NoYes   Drosophila melanogaster FlyBase 5.12 - Fruit fly
NoYes   Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquito
NoYes   Ascaris suum Victoria/Ghent - Pig roundworm
NoYes   Caenorhabditis elegans WormBase WS218 - Roundworm
NoYes   Neospora caninum Nc-Liverpool 6.2
NoYes   Plasmodium falciparum HB3
NoYes   Plasmodium falciparum Dd2
NoYes   Homo sapiens 69_37 - Human
NoYes   Pan troglodytes 69_2.1.4 - Chimpanzee
NoYes   Gorilla gorilla 69_3.1 - Western gorilla
NoYes   Pongo abelii 69_2 - Sumatran orangutan
NoYes   Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbon
NoYes   Macaca mulatta 69_1 - Rhesus monkey
NoYes   Callithrix jacchus 69_3.2.1 - White-tufted-ear marmoset
NoYes   Otolemur garnettii 69_3 - Small-eared galago
NoYes   Tarsius syrichta 69_1
NoYes   Microcebus murinus 69_1 - Gray mouse lemur
NoYes   Rattus norvegicus 69_3.4 - Norway rat
NoYes   Mus musculus 69_38 - House mouse
NoYes   Dipodomys ordii 69_1 - Ord's kangaroo rat
NoYes   Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrel
NoYes   Cavia porcellus 69_3 - Domestic guinea pig
NoYes   Oryctolagus cuniculus 69_2 - Rabbit
NoYes   Ochotona princeps 69 - American pika
NoYes   Tupaia belangeri 69 - Northern tree shrew
NoYes   Sus scrofa 69_10.2 - Pig
NoYes   Bos taurus 69_3.1 - Cattle
NoYes   Vicugna pacos 69_1 - Alpaca
NoYes   Tursiops truncatus 69_1 - Bottlenose dolphin
NoYes   Mustela putorius furo 69_1.0 - Domestic ferret
NoYes   Ailuropoda melanoleuca 69_1 - Giant panda
NoYes   Canis familiaris 69_3.1 - Dog
NoYes   Felis catus 69 - Domestic cat
NoYes   Equus caballus 69_2 - Horse
NoYes   Myotis lucifugus 69_2.0 - Little brown bat
NoYes   Pteropus vampyrus 69_1 - Large flying fox
NoYes   Sorex araneus 69_1 - European shrew
NoYes   Erinaceus europaeus 69 - Western European hedgehog
NoYes   Procavia capensis 69_1 - Cape rock hyrax
NoYes   Loxodonta africana 69_3 - African savanna elephant
NoYes   Echinops telfairi 69 - Small Madagascar hedgehog
NoYes   Dasypus novemcinctus 69_2 - Nine-banded armadillo
NoYes   Choloepus hoffmanni 69_1 - Hoffmann's two-fingered sloth
NoYes   Macropus eugenii 69_1.0 - Tammar wallaby
NoYes   Sarcophilus harrisii 69_7.0 - Tasmanian devil
NoYes   Monodelphis domestica 69_5 - Gray short-tailed opossum
NoYes   Ornithorhynchus anatinus 69_5 - Platypus
NoYes   Petromyzon marinus 69_7.0 - Sea lamprey
NoYes   Meleagris gallopavo 69_2 - Turkey
NoYes   Gallus gallus 69_2 - Chicken
NoYes   Taeniopygia guttata 69_3.2.4 - Zebra finch
NoYes   Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtle
NoYes   Anolis carolinensis 69_2.0 - Green anole
NoYes   Xenopus tropicalis 69_4.2 - Tropical clawed frog
NoYes   Latimeria chalumnae 69_1 - Coelacanth
NoYes   Gadus morhua 69_1 - Atlantic cod
NoYes   Tetraodon nigroviridis 69_8 - Spotted green pufferfish
NoYes   Takifugu rubripes 69_4 - Torafugu
NoYes   Gasterosteus aculeatus 69_1 - Three-spined stickleback
NoYes   Oryzias latipes 69_1 - Japanese medaka
NoYes   Xiphophorus maculatus 69_4.4.2 - Southern platyfish
NoYes   Oreochromis niloticus 69_1.0 - Nile tilapia
NoYes   Danio rerio 69_9 - Zebrafish
NoYes   Ciona savignyi 69_2.0 - Pacific transparent sea squirt
NoYes   Ciona intestinalis 69 - Vase tunicate
NoYes   Drosophila melanogaster 69_5 - Fruit fly
NoYes   Caenorhabditis elegans 69_215 - Roundworm
NoYes   Homo sapiens 75_37 - Human
NoYes   Homo sapiens - Human
NoYes   Mus musculus 63_37 (longest transcript per gene) - House mouse
NoYes   Loa loa v3.3 - Eye worm
NoYes   Wuchereria bancrofti v1.0 - Agent of lymphatic filariasis
NoYes   NCBI 2017_08 genome
NoYes   Protozoadb 2010_08 (Protozoadb)
NoYes   Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)
NoYes   Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)
NoYes   Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)
NoYes   STRING v9.0.5 (STRING)
NoYes   Uniprot 2018_03 genome
NoYes   Global Ocean Sampling Expedition (GOS)
NoYes   PDB chains (SCOP 1.75) (PDB)
NoYes   Protein Data Bank (all PDB sequenc)
NoYes   SCOP2 SCOPe CATH ECOD (all domain sequ)
NoYes   TargetDB (Targets)
NoYes   ALL (only advised for small superfamilies)


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