SUPERFAMILY 1.75 HMM library and genome assignments server

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SRCR-like alignments in Otolemur garnettii 76_3

These alignments are sequences aligned to the 0042161 model.

Sophisticated options are available for refining alignments:


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Alignments

The numbers along the top are the segment numbers of the HMM states, and each sequence is seperately aligned to the model.
The first sequence is the seed the model was built from.
Upper case letters are aligned, lower case letters are insertions, '-' signifies a deletion and '.' is nothing.

                                   10               20                  30                  40      
                                    |                |                   |                   |      
d1p57a_               ....p-LYPVQVSSA.....D..ARLMVFDKT..E....G....TWRLLCSSRS........NARVAGL..SCEEMGF
ENSOGAP00000015580  .csen--RRLRLVDGgs...R..CAGRVEIYH..E....G....SWGTICDDGW........DLNDAHV..VCRQLDC
ENSOGAP00000018687  .cses--HRLRLVDGgs...R..CAGRVEIYY..K....D....SWGTICDDNW........DLSDAHV..VCRQLGC
ENSOGAP00000012967  cigsg---QLRLVNGgg...R..CAGRVEVYH..E....G....SWGTVCDDSW........DLSDAHV..VCKQLGC
ENSOGAP00000018154  ....l---ALRLVNGgd...H..CQGRVEILY..R....G....SWGTVCDDGW........DTNDANV..VCRQLGC
ENSOGAP00000018154  ....l---ALRLVNGgd...H..CQGRVEVLY..R....G....SWGTVCDDGW........DTNDANV..VCRQLGC
ENSOGAP00000013238  ...gs--LRVRLAAGpg...R..CAGRVEVFH..G....G....AWGTVCDDAW........DLQDAHV..VCRQLGC
ENSOGAP00000016756  ....q-YTSLRLVNGsh...R..CEGRVEVFY..N....G....TWGTVCDDSW........DLADARV..VCRQLGC
ENSOGAP00000018687  ...se---QIRLVDGgs...R..CAGRVEIYH..E....G....SWGTICDDDW........DLSDANV..VCRQLGC
ENSOGAP00000016756  ..gdv---ALRLTNGrh...R..CEGRVELRY..N....G....SWGTVCDDSW........DMQDAQV..VCRQLGC
ENSOGAP00000006741  ..geg---SVRLVGGan...P..CQGRVEILH..G....S....LWGTVCDDDW........GLPDAAV..VCRQLGC
ENSOGAP00000016756  ....d-WPELRLVGGsg...P..CSGRVEVLH..Q....G....TWGTVCDDLW........DLNEAEV..VCRQLRC
ENSOGAP00000015580  .cser--PYLRLVDGgs...P..CAGRVEIYH..E....D....SWGTICDNSW........DLSDAHV..VCRYLGC
ENSOGAP00000006741  ...fp---ELRLVGGps...R..CRGRLEVLH..G....G....SWGSVCDDDW........DVVDANV..VCRQLGC
ENSOGAP00000018154  ...as----LRLVNGnssydG..CSGRVEIYH..S....G....RWGTVCDDTW........TIQNAQV..VCRQLQC
ENSOGAP00000016756  ...rp---ELRLVGGpg...R..CSGRVEVLH..E....G....VWGTVCDDLW........DLNEAQV..VCRQLQC
ENSOGAP00000012967  ...nl---EMRLMNGgn...R..CSGRIEVKF..Q....G....KWGTVCDDNF........NIDHASV..VCKQLEC
ENSOGAP00000003272  ....r----LRLVSGph...G..CAGRLEVWH..G....G....RWGTVCDDGW........DLRDAAV..ACRELGC
ENSOGAP00000016756  ...dw--PQMQLVNGsg...R..CSGRVEVFY..H....G....RWGRVCDDQW........DMNEANV..VCRQLGC
ENSOGAP00000006741  ....g---HLRLANGah...R..CEGRVELFL..G....Q....RWGTVCDDAW........DLRAAGV..LCKQLGC
ENSOGAP00000012967  ....k----IRLQDGnt...G..CSGRVEIWH..G....G....SWGTVCDDSW........DLADAQV..VCQQLGC
ENSOGAP00000016756  ....w--PTLRLVNGtg...R..CSGRVEVSY..H....G....SWGTVCDDGW........GLSEAQV..VCRQLGC
ENSOGAP00000015140  ....p---AVRLAGG.....RsvHEGRVELYH..A....G....QWGTICDDQW........DDADAEV..ICRQLGL
ENSOGAP00000003272  ...gl--FRVRLADGpn...R..CAGRLEVWH..A....G....RWGTVCDDNW........DLRDATV..ACWELGC
ENSOGAP00000012967  ....l---SLRLVDGvn...E..CSGRLEVKF..Q....G....EWGTVCDDSW........DNYDAAV..VCKQLQC
ENSOGAP00000003272  ...er----LRLADGph...G..CAGRLEVWH..G....G....RWGTVCDDGW........DLRDAAV..ACRQLGC
ENSOGAP00000003272  ...pr----LRLADGph...G..CAGRLEVWH..S....G....RWGSVCDDAW........DLRDAAV..ACRELGC
ENSOGAP00000006741  ...gr----LRLVGGpg...P..CRGRVEVLH..A....G....GWGTVCDDDW........DFADARV..ACREAGC
ENSOGAP00000016756  ....w--APVRLVGSqg...S..CAGRVELFY..Q....G....VWGTVCDDLW........DLPAANI..VCRQLEC
ENSOGAP00000013238  cpeeg---ALRVRGGsd...N..CSGRVELWH..A....D....SWGSVCDDSW........DLADAEV..VCRQLGC
ENSOGAP00000015140  ....f---PIRLMDGet...K..KEGRVEVFI..N....G....QWGTICDDGW........TDKDAAV..ICRQLGY
ENSOGAP00000013556  ...sr---TIRLVGGsg...P..HEGRVEILH..N....G....QWGTICDDRW........EIREGQV..VCRSLGY
ENSOGAP00000016756  .....----VQLMEGsg...R..CSGRVEVYF..E....G....VWGTVCDDFW........DEKAAQV..VCWQLGC
ENSOGAP00000016756  ....w--IEVRLLNGtg...R..CSGRVEVLI..Q....D....TWGTVCDDLW........DLAEATV..VCRQLRC
ENSOGAP00000016756  ....m---EVKLLNGtg...R..CSGRVEVLI..Q....G....TWGTVCDDLW........DLAEATV..VCRQLQC
ENSOGAP00000019043  ....v----IRLVNGsg...P..HEGRVEVFH..D....R....RWGTVCDDGW........DKKDGDV..VCRMLGF
ENSOGAP00000016756  ....w--MEVRLLNGtg...R..CSGRVEVLI..Q....G....MWGTVCDDFW........DVAEATV..VCRQLQC
ENSOGAP00000016756  ...ls------LFGGps...R..CEGRVEVLH..G....G....VWGTVCDDNW........NIKNARV..VCRLLGC
ENSOGAP00000003272  ...sp---QLRLVAGps...R..CSGRLEVWH..D....G....RWGTVCDDSW........DMRDSAV..VCWELGC
ENSOGAP00000007953  ...dg---DMRLADGga...A..NQGRVEIFY..R....G....QWGTVCDNLW........DLTDASV..VCRALGF
ENSOGAP00000016756  ....w--MEVRLLNGtg...R..CSGRVEVLI..Q....G....TWGTVCDDFW........DVAEATV..VCRQLQC
ENSOGAP00000011798  ...kk----LRLVGPgnr..P..EEGRLEVLY..Q....G....QWGTVCDDDF........ALREATV..ACRQLGF
ENSOGAP00000015015  .caen--RALRVMDGgg...P..CAGRVEMLE..R....G....QWGSVCDDTW........DLEDAHV..VCRQLGC
ENSOGAP00000001154  ....v---QLRLTGQkrk..H..NEGRVEVYY..S....G....QWGTVCDDDF........SIHAAHV..VCRELGY
ENSOGAP00000012967  ....e----LRLAGGn....K..CSGRVEIKV..Q....E....EWGTVCNNDW........NMEEVSV..ICRQLGC
ENSOGAP00000019010  ....a---HVRLKGGah...H..GEGRVEVLK..A....G....TWGTVCDRKW........DLQAASV..VCRELGF
ENSOGAP00000015140  .....----IRLAGGkg...S..HEGRLEVYY..R....G....QWGTVCDDGW........TELNTYV..VCRQLGF
ENSOGAP00000001218  .....----VRLVRPagls.P..GRGRVEVFV..G....G....RWGTVCDDAW........DVKAAAV..VCRQLGF
ENSOGAP00000012967  ..rep-----RLVGGdi...P..CSGRVEVKH..G....D....TWGSVCDSDF........SLEAASV..LCRELQC
ENSOGAP00000018154  ....l---ALRLVNAs....D..HCGRVEVLY..R....G....SWGTVCDDGW........DTNDANV..VCRQLCC
ENSOGAP00000004732  ....a--FDLRLAGDk....P..CSGRLEVLH..K....G....VWGSVCDDGW........GAREDQV..VCKQLGC
ENSOGAP00000001154  ....l----VRLRGGa....Ni.GEGRVEVLK..N....G....EWGTVCDDKW........DLLSASV..VCRELGF
ENSOGAP00000019010  ....r----FRLAGFprk..P..YEGRVEIQR..A....G....EWGTICDDDF........TLQAAHV..LCRELGF
ENSOGAP00000011798  ...ep---RVRLRSGaq...V..GEGRVEVLV..N....H....QWGTVCDHRW........NLISASV..VCRQLGF
ENSOGAP00000015580  ...dv---ELRLENGgh...R..CEGRVELKH..Q....G....EWGTVDDYDW........ELQAAEV..VCRQLGC
ENSOGAP00000013238  ...ht---EARLVGGeh...P..CSGRLEVKR..G....L....TWGTVCDADL........DLATAHV..VCRELRC
ENSOGAP00000018687  .....EYTEVRLMKNgts..Q..CEGQVELNI..F....G....DWRPLCASHW........NMANANV..VCRQFGC
ENSOGAP00000012526  ....p--VSVRIVGG.....S..VRGRAEVYY..N....S....TWGTICDDGW........DNLDATV..FCRMLGY
ENSOGAP00000015580  .....EYTEVRLMKNgtf..Q..CEGQVEMNI..F....G....DWRPFCASHW........SMANANV..LCRQLGC
ENSOGAP00000013238  .....----FRLVNGss...S..CEGRVELQV..E....G....AWAPLCAAHW........DLGDATV..LCHQLKC
ENSOGAP00000004732  ...pp---RVRLVKGsh...S..CEGRVEVEQ..Q....G....HWGLVCDDGW........DMNDVAV..LCQELGC
ENSOGAP00000018030  ....p---KVRLMNGph...P..CEGRVEVEQ..E....G....RWGTVCDDGW........DIKDVAV..VCRELGC
ENSOGAP00000004732  ....e---DVRLADGpg...Q..CQGRVELKH..Q....D....EWNAVCLTGW........NLQAAKV..VCRQLGC
ENSOGAP00000018687  .....EYTEVRLMKNgis..Q..CEGQVEMNI..S....G....HWRPLCASHW........SMANANV..VCHQLGC
ENSOGAP00000015580  ....e-FLALRLVSRdq...Q..CAGWLEIFY..N....G....TWGSVCHSPM........EAMTVST..ICRQLGC
ENSOGAP00000018687  ....e-FMALRMVSGdq...Q..CAGWLEVFY..N....G....TWGSVCRSPM........EATTVST..ICRQLGC
ENSOGAP00000015580  .....EYTEVRLMKNgss..Q..CEGQVEMNI..S....G....HWRPLCASYW........SMANANV..LCRQLSC
ENSOGAP00000012967  ....m---ELRLKGGgs...R..CAGTVEVEI..Q....K....LIGKVCERGW........GLKEADV..VCRQLGC
ENSOGAP00000013238  ....a----LRLRDGqs...H..CDGRVEASL..N....G....TWGRVLDDAW........DVRGARV..VCRQLGC
ENSOGAP00000013238  .esls------LLGGgn...R..CEGLLQVQY..L....G....HQGPVCGDHW........GMGEASV..TCRQLGC
ENSOGAP00000015580  .....----VRLVGGdg...P..CSGQVEVNS..E....G....DWIPVSDGNF........TFPTAQV..ICAELGC
ENSOGAP00000018687  ....f----VRLVGGlg...P..CSGRVEVNS..G....G....GWTPVSNGNF........MFPTAQV..ICAELGC
ENSOGAP00000018687  .....----VRLAGGdg...P..CSGQVEVNS..E....G....DWIPVSDGNF........TFPTAQV..ICAELGC
ENSOGAP00000016756  ....q--------GS.....P..CQRRVDIVQ..G....G....FWGTMCNNLW........DLSEAEV..VSQHLGC
ENSOGAP00000011798  ....n---QVRLAGGrs...P..EEGVVEVQV..EvngvQ....RWGSVCSDHW........GLTEAMV..ACRQLGL
ENSOGAP00000015015  ...eh--QSWRLTGGtd...P..CEGQVEVYF..R....G....FWNTVCDSEW........YTQEAKV..LCQTLGC
ENSOGAP00000019010  ....k----IRLSGGrs...R..HEGRVEVQV..G....GpgslRWGLICGDDW........GTLEAMV..VCRQLGL
ENSOGAP00000001154  ....k----LRLNGGrn...P..YEGRVEVLV..E....RngslVWGTVCGENW........GIVEAMV..VCRQLGL
ENSOGAP00000015580  .....----VHLVGGvg...P..CSGRVEVNS..G....G....GWTPISGGNF........IFSTAQV..ICAELGC
ENSOGAP00000012967  ...fm---SLRLTSKtsee.T..CSGRLEVFY..N....G....AWGSVGRSNM........TAATVGV..VCRQLGC
ENSOGAP00000013238  ..cse-FTDVRLQNHsg...P..CAGRLEVFY..N....G....TWGGVCQT-L........NAASLGV..LCEHLGC
ENSOGAP00000012967  ....y--TEIRLVNGkt...P..CEGRVELKM..L....G....AWGSLCSSHW........ATSG---..-------
ENSOGAP00000019010  ....t----------.....-..-EGLVEVRL..P....D....GWSQVCDKGW........SAHNSHV..VCGMLGF
ENSOGAP00000011798  ..spv----------.....-..TEGAVEVKY..D....G....HWRQVCDQGW........TMNNSRV..VCGMLGF
ENSOGAP00000015140  ....g---SVRLHGGkn...E..FDGTVEVCA..S....G....VWGTVFSSCW........GDSNASV..TCHQLQL
ENSOGAP00000001154  ....t----------.....-..-EGYVEVKD..G....K....HWKQICDKHW........TAKNSRV..VCGMFGF
ENSOGAP00000005882  ....l--GCVRFDWD.....K..SLLKVYSGS..S....H....QWLPICSDSW........NESYSEK..TCQQLGF
ENSOGAP00000008522  ....n--RCVRLYGP.....N..FILQVYSSQ..R....K....SWHPVCEDDW........SESYGRV..ACKDLGY
ENSOGAP00000015018  ....f---QVQLTGSns...R..CQGLLEVHL..W....S....TWRTVCSQSWgqspdqheDPSQASR..VCQKLRC
ENSOGAP00000015015  ...eq--LGVRLVNGss...R..CSGTVEVRL..G....K....SWEPACGALW........NGRAAEA..VCQALGC
ENSOGAP00000013238  ....m--QQVRLGGGgs...P..CAGVPEVVN..P....A....--GSVLRCDL........HKEEASV..FCRQLGC
ENSOGAP00000013006  ....w---AVRVSGQ.....N..AVLQV--FT..A....A....SWKTMCSDDW........KGHYAKV..ACAQLGF
ENSOGAP00000019815  ....v---SFRVDRD.....D..FLLEVQVRA..Q....S....DWLLVCNEGW........SPALGVQ..ICQSLGH
ENSOGAP00000004192  ...fs----VSLHGNk....N..SEGVVEVKLvdQ....D....TKMFICHSSW........SMTEANV..ACLDLGF
ENSOGAP00000015018  .qpkv---QSRLVGG.....SgmCEGTVEVRQ..S....T....QWAPLCDSSP........LKGTARWeeVCQEQQC
ENSOGAP00000002895  ...yp----VQVSPV.....D..ARLTVFDKT..E....G....TWRLLCSSRS........NARVAGL..SCEEMGF
ENSOGAP00000002162  ....v---SVRLSKD.....Q..STLQVLDQD..T....K....KWYSACFDQF........TEAMAKT..ACRQMGY
ENSOGAP00000012815  ...ea--HCVFFINGtt...S..KAGLVQFRI..Q....S....IWHTACAENW........TAQISND..VCQLMGL
ENSOGAP00000005993  .dcvt------LSKNa....N..SSSFLTVHR..G....A....TEYHVCADGW........QETLSQL..ACKQMGL


                        50                     60         70         80                 90          
                         |                      |          |          |                  |          
d1p57a_               LRALTHSELDVR.............TAGAAGT.SGFFCVDEGRLP.HTQRLLEV.........ISVCD......CPRG
ENSOGAP00000015580  GEALGALG---F.............AHFGKGS.GPIWLDDVNCTG.KEAHVWRCpsrg.....WGQHN......CRHK
ENSOGAP00000018687  GEALGALG---S.............AQFGEGS.GPIWLDDVNCTG.KETHVWRCpsrg.....WGQHN......CRHK
ENSOGAP00000012967  GVAINATG---S.............AYFGEGK.GSIWLDELKCNG.KESHIWQChshg.....WGQHN......CRHK
ENSOGAP00000018154  GRARSALG---N.............AHFGQGS.GPIVLDNVACSG.HESYLWSChhng.....WLSHN......CGHS
ENSOGAP00000018154  GWASSAPG---N.............ARFGQGS.GPIVLDNVACSG.HESNLWSCrhng.....WLSHN......CGHS
ENSOGAP00000013238  GRALSAPG---A.............AHFGAGA.GLIWLDELGCQG.QESALWQCpsga.....WGQHD......CGHK
ENSOGAP00000016756  GKALSAPV---K.............NHFDGGT.GHVMLDDVQCTG.NEIKVWQCmhsg.....WFSHN......CGHH
ENSOGAP00000018687  GEALEALG---S.............AQYEVGS.GPIWLDKLQCTG.KESHVWKCpfqg.....WSIHS......CDHS
ENSOGAP00000016756  GAAVAAPG---Q.............AHFARGL.GAIVLDDVECAG.TEARLWQClhsg.....WLNHN......CGHH
ENSOGAP00000006741  GAALAATT---N.............AFFGFGT.GHILLDNVHCEG.SEPHLAAClslg.....WGVHN......CGHH
ENSOGAP00000016756  GQAVSALG---K.............ARFGPGS.GDILLDNLQCAG.VERHLGQCthsg.....WLEHN......CGHH
ENSOGAP00000015580  GEALDALG---S.............AAFGAGS.GPIWLDELQCTG.KESYIWKCpsqg.....WGNHD......CSDR
ENSOGAP00000006741  GLALPVPQ---P.............LAFGQGR.GPILLDNVECRG.QEAALSECgsrg.....WGVHN......CFHY
ENSOGAP00000018154  GYAVSALG---N.............AFFGSGS.GPITLDDVVCSG.TESTLWQCrnrg.....WFSHN......CGHH
ENSOGAP00000016756  GQAVSSPG---E.............AHFGPGS.GDILLDNLQCSG.VEHYLDQCghsg.....WSEHN......CGHH
ENSOGAP00000012967  GSAVSFSG---S.............ATFGEGS.GPIWFDDLVCDG.NESALWNCkhqg.....WGKHN......CDHA
ENSOGAP00000003272  GGALAAPG---G.............ARFGPGS.GPVWMDDVGCGG.GEQALRDCprsp.....WGRSN......CDHS
ENSOGAP00000016756  GRALAAPA---E.............AEFGEGK.GQFLLDDVDCSG.KESFLGQCphag.....WGVHN......CGPR
ENSOGAP00000006741  GRALAAPG---E.............AHFGPGQ.GPILLDNVKCRG.DESTLLLCshir.....WDAHN......CDHS
ENSOGAP00000012967  GSALKALK---E.............AEFGQGT.GPIWLNEVNCKG.NESALWNCpakr.....WGHSE......CGHK
ENSOGAP00000016756  GPAVSAPL---G.............AHFGPGF.GKIVLDNVRCSG.EEASLALCahds.....WFTHD......CSHE
ENSOGAP00000015140  SGIAKAWN---Q.............AYFGEGS.GPVMLDEVRCTG.NELSIEQCpkss.....WGEHN......CDHK
ENSOGAP00000003272  GKVRPRVG---K.............THYGPGT.GPIWLDDMGCKG.SETSLTNCpsrp.....WGKHN......CDHE
ENSOGAP00000012967  PTAITAIG---R.............VNASEGS.GPIWLDSVSCQG.HEPAVWQCkhre.....WGKHY......CNHN
ENSOGAP00000003272  GGALAAPG---G.............AFFGEGT.GLVWLSELACRG.SEGQLGFC.........PHRGWkahi..CSHE
ENSOGAP00000003272  GRALAAPG---G.............AFFGEGS.GPIILDDLRCRG.NETALRFCpsrt.....WGQHD......CHHR
ENSOGAP00000006741  GPALGATG---L.............GHFGYGR.GPVLLDNVGCAG.TEARLSDCfhlg.....WGQHN......CGHH
ENSOGAP00000016756  GWAISALG---E.............AHFGEGS.GKILLDNVHCRG.DEQHLEECshig.....WFSHN......CGHG
ENSOGAP00000013238  GRAENALW---G.............AAFGPGS.GPVWLDEVGCRG.SEVSLSECqaer.....WGHGD......CTHK
ENSOGAP00000015140  KGPARARS---M.............AYFGEGK.GPIHVDNVKCTG.NERSLADCikqd.....IGRHN......CRHS
ENSOGAP00000013556  PGVQSVHK---G.............AHFGQGT.GPIWLNEVLCFG.RESSIEEC.........KIRQWgvrv..CSHS
ENSOGAP00000016756  GTAISAPG---E.............AYFGQGS.GSILLDNVQCSG.SESNLGLCshag.....WFTHN......CEHG
ENSOGAP00000016756  GHAAAAPT---G.............AHFGAGS.GKILLDDVQCVG.SEGHLGQCvhng.....QARHN......CGHL
ENSOGAP00000016756  GHAVAAPT---G.............AHFGAGS.GKILLDNVQCLG.SEGHLGQCmhrd.....QAGHN......CGHL
ENSOGAP00000019043  RGVEEVYR---T.............ARFGQGT.GRIWMDDVACKG.TEDTIFRCsfsk.....WGVTN......CGHA
ENSOGAP00000016756  GHAVAAPT---G.............AHFGAGS.GKILLDDVQCVG.SEGHLGQCvhgg.....QARHN......CGHL
ENSOGAP00000016756  GPALGAPG---H.............GRFGPGA.GPILLDDVRCTG.FEDELGRCshsg.....WGHHN......CHHR
ENSOGAP00000003272  GGPRQPDPA--A.............GRFGWGA.GPIWLDDVGCVG.TESSLSDCpaal.....WGKHN......CAHN
ENSOGAP00000007953  ENATEALG---R.............AAFGKGT.GPVMLDEVECTG.TEPSLANCkslg.....WLKSN......CRHT
ENSOGAP00000016756  GHAVAAPT---G.............AHFGAGS.GKILLDDVQCVG.SEDHLGQCmnrg.....QARHN......CGHL
ENSOGAP00000011798  EAALTWAH---S.............AKYGQGE.GPIWLDNVHCAG.TESSLDQCgsng.....WGVSD......CSHS
ENSOGAP00000015015  GWAVQALP---G.............MHFTPGR.GPIHRDQVNCSG.AEAYLWDCpgl......PGYHY......CGHK
ENSOGAP00000001154  VEAKSWTA---S.............SSYGKGE.GPIWLDNVYCTG.KEATLAACssng.....WGVTD......CKHT
ENSOGAP00000012967  PTAIKATG---W.............ANSSAGS.GRIWMDHVSCGG.NESAIWDCkhdg.....WGKHN......CTHE
ENSOGAP00000019010  GSAREALS---G.............ARMGQGM.GAIHVSEVRCSG.QEPSLWKCphrn.....ITADD......CSHS
ENSOGAP00000015140  KYGKQASA----.............NHFQESP.GPIWLDDVSCSG.KETSVLQCsrrq.....WGRHD......CSHR
ENSOGAP00000001218  AHAVRASK---R.............AEFGEGRsLPILLDDVRCAG.SEHSLLECthag.....VGTHN......CGHQ
ENSOGAP00000012967  GTVVSILG---G.............AHFGQGS.GQIWAEEFRCEG.HESHLSLC.........PVAPRpegi..CSHS
ENSOGAP00000018154  GWARSAPG---N.............ACFGQGS.GLIVLDDVACSG.HESYLWSYrhng.....WLLHN......CGHS
ENSOGAP00000004732  GKPLSPSPKD-R.............KSYGPGV.GRIWLDDVRCSG.KEQSLEYCqhrf.....WGYHD......CTHK
ENSOGAP00000001154  GSAKEAVT---G.............SRLGQGI.GPIHLNEIECTG.NEKSLIDCkfn......A---Esqg...CNHE
ENSOGAP00000019010  TEATGWTH---S.............AKYGPGT.GRIWLDNLSCTG.AEKSVTECasrg.....WGNSD......CTHD
ENSOGAP00000011798  GSAREALF---G.............AQLGQGL.GPIHLSEVRCRG.HERTLSDClal......KGPQNg.....CQHE
ENSOGAP00000015580  GTAVEAPK---G.............PHFGSGV.GPIWLGYIVCQG.NESNVNHCrhspfed..LLNFG......YSRS
ENSOGAP00000013238  GAAVSTPG---G.............AHFGRGS.GLAWTEAFRCAG.NESLLFHC.........PRGPGsq....CGHS
ENSOGAP00000018687  GVAMSTPQ---G.............AYIVEEE.TRILKDQFHCLG.TEPFLWHCpvta.....LGAPD......CNHG
ENSOGAP00000012526  SRGRAITR----.............--QGAGT.GQIWLDDVACQG.TESTLWSCrkns.....WGSHN......CVHE
ENSOGAP00000015580  GVAMSTPQ---G.............AYIVEEE.TRIWKDRFHCSG.TEPFLWHCpvta.....LGSPD......CNHG
ENSOGAP00000013238  GHAVATLR---G.............GHFGDGD.APIWPDAFHCEG.TEPHLFNCtast.....LGAPA......CAPG
ENSOGAP00000004732  GVAKRAISGNLY.............KPLPKED.QKILLQNVDCSG.TEKTLAQC.........KKDEDvfg...CSLD
ENSOGAP00000018030  GAPRHTPAAMLY.............PPAAEEA.QPVLIQVALCNG.TEAALAECeq.......VEPFD......CGHV
ENSOGAP00000004732  GRAVLTKKH--C.............EESAQGQ.RPIWPSQMSCSG.QEVSLQDCpsrp.....QGKSN......CTFD
ENSOGAP00000018687  GVALSTPQ---G.............EFFVEGG.DEIWKDQFYCSG.AESSLGHCpvtt.....LVGSD......CNHG
ENSOGAP00000015580  GDSGTLNS---S.............VAIREGS.RPRWVDVIQCRK.TATSLWQC.........PSNPWkyrs..CSSS
ENSOGAP00000018687  GDSGTLNS---S.............VAVREGS.RPRWVDVIQCRK.TATSLWQC.........PSHPWnnrs..CSSS
ENSOGAP00000015580  GVAMSTPQ---G.............EFFVEGG.NGIWKDQFHCSG.AEPSLWHCpvtt.....LVGPD......CNCV
ENSOGAP00000012967  GSALKTSY---Q.............MYSKMKT.TNTWLFVNSCDG.NETSLWGCrnwq.....WGGLS......CDHY
ENSOGAP00000013238  GGAELAYD---A.............QAPGHRA.VPVGLSRVHCLG.NETRLGQC.........NLSVSlwet..AGTS
ENSOGAP00000013238  GPALSASK---Y.............VLRPQEI.GPPWLHSAHCQG.EEASLWECslgt.....WGPLSs.....CECQ
ENSOGAP00000015580  SKAESVLG---N.............VSFREAS.VRVWAEEFQCEG.KESGLWFC.........PRVPCpggt..CHHS
ENSOGAP00000018687  GKPASVLE---D.............VSFIKAS.GQLWAEEFQCQG.QESSLWLC.........PRAPCaegt..CLHS
ENSOGAP00000018687  GRAESVLG---N.............VSFREAS.RQVWAEEFQCDG.KESGLWFCp........RVSCPggt...CHHT
ENSOGAP00000016756  GWAIAVPG---K.............AHFGPGS.GDILRDDIQCSG.IEQHPGLCpssg.....WSDHN......CGHH
ENSOGAP00000011798  GFANHAIKETWY.............WQGTPGA.GEVVMSGVRCSG.TELALQQCqrhg.....PVHCS......HGTG
ENSOGAP00000015015  GNVVEQPKGRPH.............SLSGKMF.-------YSCKG.EEPTLSDC.........FWRFNnsnl..CRES
ENSOGAP00000019010  GYANHGLQETWY.............WDSGNIT.-EVVMSGVHCTG.NELSLDQC.........AHHGThitckrTGTR
ENSOGAP00000001154  GFASNAFQETWY.............WHGDIFA.NKVVMSGVKCSG.TELSLAHC.........RHDEEdva...CPQG
ENSOGAP00000015580  GKPASVLE---D.............VSFIKAS.GQLWTEEFQCQG.QESRLWLC.........PRAPCaggt..CLHS
ENSOGAP00000012967  ADKGKINP---A.............PLDKATS.MSMWVDNIQCPK.GPDTLWQC.........PSSPWkqrp..ASPS
ENSOGAP00000013238  GPQGQLLA---G.............AGSWPGP.EARWLASIQCRDrHDRSLWQC.........PSAPWdpds..CSSG
ENSOGAP00000012967  -----------G.............SHFGKGN.GQIWRHMFHCTG.TEQHMGDCpvta.....LGASL......CSAG
ENSOGAP00000019010  PSEKRVNAAFYR.............LLAQRQQ.HSFGLHGVACMG.TEAHLSLCsle......FYRANdttr..CPGG
ENSOGAP00000011798  PSEQPINSHYYRkvwnlkmkdpkyrLNSLANK.NSFWIHRVNCLG.TEPHMANCqvqvapargKLHPA......CPGG
ENSOGAP00000015140  GGKGIAKQ---T.............PFSGLGL.IPINCSNVRCQG.DEENIWLC.........EKDIWqgv...CPQT
ENSOGAP00000001154  PGEKAYNTKVYK.............IFASRKK.QRYWPYSMDCMG.TEAHISSCklgppvs..L---DpmknvtCENG
ENSOGAP00000005882  ESAYRTTKVAHK.............DFASSFS.---------VSE.YNSTIQES.........LQRSE......CPSQ
ENSOGAP00000008522  KNSFYSSQ---G.............ITDDTGA.SDFMKLNKS-AG.NIELYKKL.........YHSNT......CSSK
ENSOGAP00000015018  GEAFNLFP---S.............AHFNKPK.-----NQVICRG.SLGSFSNC.........SS--E......LKRC
ENSOGAP00000015015  GGAEAAAQLTPPtpefgpaagn...ASGVPNV.TLAGVPAVLCSG.VEWRLCDV.........VEHEC......SGDR
ENSOGAP00000013238  GSALQWSTA---.............-HGRGDP.GDKGQKFVTCQG.TESLIFNC.........KMNLNfiaq..CDLP
ENSOGAP00000013006  PSHVSSDSLRVS.............SLEGQFQ.EEFVSINHLLPD.DKVTALHHsvyv.....SFREE......CASG
ENSOGAP00000019815  LRMTYYKGVNLT.............DHKLNSS.QRFAQLSSSPGG.FLEEIRQP.........--RNN......CTSG
ENSOGAP00000004192  QQGALNTQRRFG.............ISEEPYI.NSTECLHVHCWG.FETSLAECtf.......TKRRT......KESQ
ENSOGAP00000015018  GSVNSYHM---L.............DAGEKTS.RGFS-------C.SQEKLSQCh........ELWEK......KAHC
ENSOGAP00000002895  LRALAHSELDVR.............TVGANGT.SGFFCVDEGRLP.HAQRLLDV.........ISVCD......CPRG
ENSOGAP00000002162  SSKPVFKD---V.............RMDP---.-DQELDVVLVTE.KTQQLRVL.........NTSRP......CLSG
ENSOGAP00000012815  GSGNSSMP----.............-ISSTQS.GPFVKLSTAADG.SLTL----.........TPSQQ......CLQN
ENSOGAP00000005993  GEPSETKL---L.............QLQENEQ.RWLTLHPLWQSL.PGTTLHRL.........LVNGQs.....CESG


                            100       110      
                              |         |      
d1p57a_               RF...LAAICQDCGRRK--lp....
ENSOGAP00000015580  ED...AGVTCSE-------f.....
ENSOGAP00000018687  ED...AGVTCSE-------fm....
ENSOGAP00000012967  ED...AGVICSE-------fmsl..
ENSOGAP00000018154  ED...AGVICSG-------np....
ENSOGAP00000018154  ED...AGVICA--------a.....
ENSOGAP00000013238  ED...AGVFCSE-------ft....
ENSOGAP00000016756  ED...ASAICSG-------v.....
ENSOGAP00000018687  ED...AGVTCS--------vh....
ENSOGAP00000016756  ED...ASAICSGC------......
ENSOGAP00000006741  ED...AGVLCA--------a.....
ENSOGAP00000016756  ED...AGVICSG-------k.....
ENSOGAP00000015580  MD...AGVICS--------......
ENSOGAP00000006741  ED...VAVLCD--------eflpt.
ENSOGAP00000018154  ED...ASVICSD-------l.....
ENSOGAP00000016756  ED...AGVICTG-------i.....
ENSOGAP00000012967  ED...VGVICLE-------g.....
ENSOGAP00000003272  ED...AGLVCTG-------pa....
ENSOGAP00000016756  ED...ASVVCTE-------......
ENSOGAP00000006741  ED...ASVLCRP-------......
ENSOGAP00000012967  ED...AAVNCSE-------i.....
ENSOGAP00000016756  KD...AGAICS--------......
ENSOGAP00000015140  ED...AGVSCTP-------l.....
ENSOGAP00000003272  ED...VGLTCTG-------y.....
ENSOGAP00000012967  ED...AGVTCSD-------gs....
ENSOGAP00000003272  ED...AGVVCAG-------qr....
ENSOGAP00000003272  ED...AGAVCD--------gmp...
ENSOGAP00000006741  ED...AGALCAG-------p.....
ENSOGAP00000016756  ED...ASVICS--------......
ENSOGAP00000013238  ED...AAVRCSG-------sp....
ENSOGAP00000015140  ED...AGVIC---------......
ENSOGAP00000013556  ED...AGVTCT--------......
ENSOGAP00000016756  ED...AGVICS--------......
ENSOGAP00000016756  ED...ASVICTG-------p.....
ENSOGAP00000016756  ED...AGVICAG-------......
ENSOGAP00000019043  ED...AGVTC---------n.....
ENSOGAP00000016756  ED...AGVICAG-------......
ENSOGAP00000016756  ED...AGVVCAG-------t.....
ENSOGAP00000003272  ED...VGVTCTG-------p.....
ENSOGAP00000007953  QD...ASVVCTN-------e.....
ENSOGAP00000016756  ED...AGVIC---------a.....
ENSOGAP00000011798  ED...VGVMCHP-------qr....
ENSOGAP00000015015  ED...AGVVCSE-------hq....
ENSOGAP00000001154  ED...VGVVCSE-------kr....
ENSOGAP00000012967  QD...AGVTCSN-------g.....
ENSOGAP00000019010  QD...AAVRC---------n.....
ENSOGAP00000015140  ED...VGISCYP-------g.....
ENSOGAP00000001218  ED...AGVVCSH-------e.....
ENSOGAP00000012967  RD...VGVVCSR-------y.....
ENSOGAP00000018154  ED...ASVICSG-------sr....
ENSOGAP00000004732  ED...VAVICSG-------......
ENSOGAP00000001154  ED...AAVRC---------......
ENSOGAP00000019010  ED...AGVICKD-------qrl...
ENSOGAP00000011798  ND...AAVRC---------n.....
ENSOGAP00000015580  WT...AGVVCSG-------f.....
ENSOGAP00000013238  RD...AGLTCSG-------e.....
ENSOGAP00000018687  NT...ASVICSG-------nqt...
ENSOGAP00000012526  ED...AGVECS--------......
ENSOGAP00000015580  NT...ASVICSG-------nqt...
ENSOGAP00000013238  NS...ASAVCS--------agl...
ENSOGAP00000004732  EA...AGAVCE--------nl....
ENSOGAP00000018030  ED...AGAVC---------e.....
ENSOGAP00000004732  DQ...VWVECED-------af....
ENSOGAP00000018687  NT...ASVICS--------......
ENSOGAP00000015580  EE...AYITC---------a.....
ENSOGAP00000018687  DE...AYIICAG-------......
ENSOGAP00000015580  NT...ASVICSG-------nk....
ENSOGAP00000012967  DE...ARITCS--------ah....
ENSOGAP00000013238  KD...VGVVCSG-------s.....
ENSOGAP00000013238  CV...AVITCSD-------gt....
ENSOGAP00000015580  GT...AQIICSE-------ytevr.
ENSOGAP00000018687  GA...VQIICSE-------ytevr.
ENSOGAP00000018687  GA...VQIVCSE-------ytevr.
ENSOGAP00000016756  ED...AEVICSS-------s.....
ENSOGAP00000011798  RS...AGVSCMD-------sapdlv
ENSOGAP00000015015  HA...ARVLCSG-------sr....
ENSOGAP00000019010  FT...AGVICSE-------tasd..
ENSOGAP00000001154  GVqygAGVACSE-------tapdl.
ENSOGAP00000015580  GA...VQIICSE-------ytevr.
ENSOGAP00000012967  EE...TWITC---------dn....
ENSOGAP00000013238  EE...AWVLCAE-------......
ENSOGAP00000012967  QV...ASVICSG-------nqsq..
ENSOGAP00000019010  AP...AVVSCVP-------......
ENSOGAP00000011798  MH...AVVSCV--------agprfr
ENSOGAP00000015140  MI...A-------------a.....
ENSOGAP00000001154  LP...AVVSCMP-------......
ENSOGAP00000005882  NY...VSLQCSHCGLR---......
ENSOGAP00000008522  KV...VSLRCIACGA----t.....
ENSOGAP00000015018  HP...LSLICLE-------pqtt..
ENSOGAP00000015015  KP...AWVTCA--------en....
ENSOGAP00000013238  VY...TQVVCSG-------r.....
ENSOGAP00000013006  HV...VTLKCTVCGLR---......
ENSOGAP00000019815  QI...VSLKCSECGAR---p.....
ENSOGAP00000004192  DL...AGVVCY--------tqd...
ENSOGAP00000015018  KR...VFVTCQD-------php...
ENSOGAP00000002895  HF...LATICQDCGRR---k.....
ENSOGAP00000002162  SL...VSLNCLACG-----es....
ENSOGAP00000012815  SL...ILLQCNP-------kscgk.
ENSOGAP00000005993  SK...ISLLCN--------k.....


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Model: 0042161 (list models)
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Alignment:



Display Options:
Output in FASTA-like format: NoYes
Output column indices: NoYes
Sequence index (number) on each line: NoYes

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Add alignments from genomes

Select below additional genomes you would like to see alignments for, then click on 'Re-Submit'. The genome assignments will be added to this page.


Select to display   Genome
NoYes   Canis familiaris 58 (pseudogenes) - Dog
NoYes   Danio rerio 58 (pseudogenes) - Zebrafish
NoYes   Gallus gallus 58 (pseudogene) - Chicken
NoYes   Homo sapiens 58 (pseudogenes) - Human
NoYes   Mus musculus 56 (pseudogenes) - House mouse
NoYes   Pan troglodytes 58 (pseudogenes) - Chimpanzee
NoYes   Rattus norvegicus 58 (pseudogenes) - Norway rat
NoYes   Homo sapiens 76_38 - Human
NoYes   Pan troglodytes 76_2.1.4 - Chimpanzee
NoYes   Gorilla gorilla 76_3.1 - Western gorilla
NoYes   Pongo abelii 76_2 - Sumatran orangutan
NoYes   Tarsius syrichta 76_1
NoYes   Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbon
NoYes   Papio anubis 76 - Olive baboon
NoYes   Macaca mulatta 76_1 - Rhesus monkey
NoYes   Callithrix jacchus 76_3.2.1 - White-tufted-ear marmoset
NoYes   Otolemur garnettii 76_3 - Small-eared galago
NoYes   Microcebus murinus 76_1 - Gray mouse lemur
NoYes   Rattus norvegicus 76_5.0 - Norway rat
NoYes   Mus musculus 76_38 - House mouse
NoYes   Dipodomys ordii 76_1 - Ord's kangaroo rat
NoYes   Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrel
NoYes   Heterocephalus glaber v1.7-2 - Naked mole-rat
NoYes   Cavia porcellus 76_3 - Domestic guinea pig
NoYes   Oryctolagus cuniculus 76_2 - Rabbit
NoYes   Ochotona princeps 76 - American pika
NoYes   Tupaia belangeri 76 - Northern tree shrew
NoYes   Sus scrofa 76_10.2 - Pig
NoYes   Bos taurus 76_3.1 - Cattle
NoYes   Ovis aries 76_3.1 - Sheep
NoYes   Vicugna pacos 76_1 - Alpaca
NoYes   Tursiops truncatus 76_1 - Bottlenose dolphin
NoYes   Mustela putorius furo 76_1.0 - Domestic ferret
NoYes   Ailuropoda melanoleuca 76_1 - Giant panda
NoYes   Canis familiaris 76_3.1 - Dog
NoYes   Felis catus 76_6.2 - Domestic cat
NoYes   Equus caballus 76_2 - Horse
NoYes   Myotis lucifugus 76_2.0 - Little brown bat
NoYes   Pteropus vampyrus 76_1 - Large flying fox
NoYes   Sorex araneus 76_1 - European shrew
NoYes   Erinaceus europaeus 76 - Western European hedgehog
NoYes   Procavia capensis 76_1 - Cape rock hyrax
NoYes   Loxodonta africana 76_3 - African savanna elephant
NoYes   Echinops telfairi 76 - Small Madagascar hedgehog
NoYes   Dasypus novemcinctus 76_2 - Nine-banded armadillo
NoYes   Choloepus hoffmanni 76_1 - Hoffmann's two-fingered sloth
NoYes   Macropus eugenii 76_1.0 - Tammar wallaby
NoYes   Sarcophilus harrisii 76_7.0 - Tasmanian devil
NoYes   Monodelphis domestica 76_5 - Gray short-tailed opossum
NoYes   Ornithorhynchus anatinus 76_5 - Platypus
NoYes   Saccoglossus kowalevskii v3.0
NoYes   Petromyzon marinus 76_7.0 - Sea lamprey
NoYes   Meleagris gallopavo 76_2 - Turkey
NoYes   Gallus gallus 76_4 - Chicken
NoYes   Anas platyrhynchos 76_1.0 - Mallard
NoYes   Taeniopygia guttata 76_3.2.4 - Zebra finch
NoYes   Ficedula albicollis 76_1.0 - Collared flycatcher
NoYes   Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtle
NoYes   Anolis carolinensis 76_2.0 - Green anole
NoYes   Xenopus laevis - African clawed frog
NoYes   Xenopus tropicalis 76_4.2 - Tropical clawed frog
NoYes   Latimeria chalumnae 76_1 - Coelacanth
NoYes   Lepisosteus oculatus 76 - Spotted gar
NoYes   Gadus morhua 76_1 - Atlantic cod
NoYes   Tetraodon nigroviridis 76_8 - Spotted green pufferfish
NoYes   Takifugu rubripes 76_4 - Torafugu
NoYes   Gasterosteus aculeatus 76_1 - Three-spined stickleback
NoYes   Oryzias latipes 76_1 - Japanese medaka
NoYes   Xiphophorus maculatus 76_4.4.2 - Southern platyfish
NoYes   Poecilia formosa 76 - Amazon molly
NoYes   Oreochromis niloticus 76_1.0 - Nile tilapia
NoYes   Astyanax mexicanus 76 - Mexican tetra
NoYes   Danio rerio 76_9 - Zebrafish
NoYes   Oikopleura dioica
NoYes   Ciona savignyi 76_2.0 - Pacific transparent sea squirt
NoYes   Ciona intestinalis 76 - Vase tunicate
NoYes   Strongylocentrotus purpuratus v3.1 - Purple sea urchin
NoYes   Adineta vaga
NoYes   Octopus bimaculoides 280
NoYes   Crassostrea gigas 22 - Pacific oyster
NoYes   Lottia gigantea - Owl limpet
NoYes   Helobdella robusta
NoYes   Capitella sp. I
NoYes   Danaus plexippus OGS1.0 - Monarch butterfly
NoYes   Heliconius melpomene - Postman butterfly
NoYes   Bombyx mori - Domestic silkworm
NoYes   Nasonia vitripennis - Jewel wasp
NoYes   Apis mellifera 38.2d - Honey bee
NoYes   Harpegnathos saltator v3.3 - Jerdon's jumping ant
NoYes   Linepithema humile v1.1 - Argentine ant
NoYes   Pogonomyrmex barbatus v1.2 - Red harvester ant
NoYes   Solenopsis invicta v.2.2.3 - Red fire ant
NoYes   Acromyrmex echinatior v3.8 - Panamanian leafcutter ant
NoYes   Atta cephalotes v1.1
NoYes   Camponotus floridanus v3.3 - Florida carpenter ant
NoYes   Lucilia cuprina - Australian sheep blowfly
NoYes   Drosophila grimshawi 1.3
NoYes   Drosophila willistoni 1.3
NoYes   Drosophila pseudoobscura 2.13
NoYes   Drosophila persimilis 1.3
NoYes   Drosophila suzukii
NoYes   Drosophila yakuba 1.3
NoYes   Drosophila simulans 1.3
NoYes   Drosophila sechellia 1.3
NoYes   Drosophila melanogaster 76_5 - Fruit fly
NoYes   Drosophila erecta 1.3
NoYes   Drosophila ananassae 1.3
NoYes   Drosophila virilis 1.2
NoYes   Drosophila mojavensis 1.3
NoYes   Megaselia scalaris 22
NoYes   Aedes aegypti 55 - Yellow fever mosquito
NoYes   Culex pipiens quinquefasciatus - Southern house mosquito
NoYes   Anopheles darlingi 22 - American malaria mosquito
NoYes   Anopheles gambiae 49_3j - African malaria mosquito
NoYes   Tribolium castaneum 3.0 - Red flour beetle
NoYes   Pediculus humanus corporis - Human body louse
NoYes   Acyrthosiphon pisum - Pea aphid
NoYes   Rhodnius prolixus 22
NoYes   Daphnia pulex - Common water flea
NoYes   Strigamia maritima 22
NoYes   Sarcoptes scabiei
NoYes   Tetranychus urticae - Two-spotted spider mite
NoYes   Ixodes scapularis - Black-legged tick
NoYes   Pristionchus pacificus
NoYes   Meloidogyne hapla
NoYes   Onchocerca volvulus 22
NoYes   Brugia malayi WS250 - Agent of lymphatic filariasis
NoYes   Caenorhabditis japonica
NoYes   Caenorhabditis brenneri
NoYes   Caenorhabditis remanei
NoYes   Caenorhabditis elegans 76_235 - Roundworm
NoYes   Caenorhabditis briggsae 2
NoYes   Trichinella spiralis 22
NoYes   Hymenolepis microstoma
NoYes   Echinococcus multilocularis
NoYes   Echinococcus granulosus
NoYes   Taenia solium - Pork tapeworm
NoYes   Schistosoma mansoni
NoYes   Mnemiopsis leidyi - Sea walnut
NoYes   Acropora digitifera v1.0
NoYes   Nematostella vectensis 1.0 - Starlet sea anemone
NoYes   Hydra vulgaris
NoYes   Amphimedon queenslandica
NoYes   Trichoplax adhaerens
NoYes   Chlorella variabilis sp. NC64A
NoYes   Volvox carteri f. nagariensis
NoYes   Volvox carteri v199
NoYes   Chlamydomonas reinhardtii 4.0
NoYes   Bigelowiella natans CCMP2755 22
NoYes   Cyanophora paradoxa
NoYes   Aureococcus anophagefferens
NoYes   Cryptosporidium hominis
NoYes   Cryptosporidium muris
NoYes   Cryptosporidium parvum Iowa II
NoYes   Neospora caninum
NoYes   Toxoplasma gondii VEG
NoYes   Toxoplasma gondii ME49
NoYes   Toxoplasma gondii GT1
NoYes   Babesia bovis T2Bo
NoYes   Theileria parva
NoYes   Theileria annulata
NoYes   Plasmodium falciparum 3D7
NoYes   Plasmodium vivax SaI-1 7.0
NoYes   Plasmodium knowlesi strain H
NoYes   Plasmodium yoelii ssp. yoelii 1
NoYes   Plasmodium chabaudi
NoYes   Plasmodium berghei ANKA
NoYes   Symbiodinium minutum clade B1 v1.2
NoYes   Guillardia theta CCMP2712 v1.0
NoYes   Emiliania huxleyi CCMP1516
NoYes   Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frog
NoYes   Drosophila melanogaster FlyBase 5.12 - Fruit fly
NoYes   Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquito
NoYes   Ascaris suum Victoria/Ghent - Pig roundworm
NoYes   Caenorhabditis elegans WormBase WS218 - Roundworm
NoYes   Neospora caninum Nc-Liverpool 6.2
NoYes   Plasmodium falciparum HB3
NoYes   Plasmodium falciparum Dd2
NoYes   Homo sapiens 69_37 - Human
NoYes   Pan troglodytes 69_2.1.4 - Chimpanzee
NoYes   Gorilla gorilla 69_3.1 - Western gorilla
NoYes   Pongo abelii 69_2 - Sumatran orangutan
NoYes   Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbon
NoYes   Macaca mulatta 69_1 - Rhesus monkey
NoYes   Callithrix jacchus 69_3.2.1 - White-tufted-ear marmoset
NoYes   Otolemur garnettii 69_3 - Small-eared galago
NoYes   Tarsius syrichta 69_1
NoYes   Microcebus murinus 69_1 - Gray mouse lemur
NoYes   Rattus norvegicus 69_3.4 - Norway rat
NoYes   Mus musculus 69_38 - House mouse
NoYes   Dipodomys ordii 69_1 - Ord's kangaroo rat
NoYes   Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrel
NoYes   Cavia porcellus 69_3 - Domestic guinea pig
NoYes   Oryctolagus cuniculus 69_2 - Rabbit
NoYes   Ochotona princeps 69 - American pika
NoYes   Tupaia belangeri 69 - Northern tree shrew
NoYes   Sus scrofa 69_10.2 - Pig
NoYes   Bos taurus 69_3.1 - Cattle
NoYes   Vicugna pacos 69_1 - Alpaca
NoYes   Tursiops truncatus 69_1 - Bottlenose dolphin
NoYes   Mustela putorius furo 69_1.0 - Domestic ferret
NoYes   Ailuropoda melanoleuca 69_1 - Giant panda
NoYes   Canis familiaris 69_3.1 - Dog
NoYes   Felis catus 69 - Domestic cat
NoYes   Equus caballus 69_2 - Horse
NoYes   Myotis lucifugus 69_2.0 - Little brown bat
NoYes   Pteropus vampyrus 69_1 - Large flying fox
NoYes   Sorex araneus 69_1 - European shrew
NoYes   Erinaceus europaeus 69 - Western European hedgehog
NoYes   Procavia capensis 69_1 - Cape rock hyrax
NoYes   Loxodonta africana 69_3 - African savanna elephant
NoYes   Echinops telfairi 69 - Small Madagascar hedgehog
NoYes   Dasypus novemcinctus 69_2 - Nine-banded armadillo
NoYes   Choloepus hoffmanni 69_1 - Hoffmann's two-fingered sloth
NoYes   Macropus eugenii 69_1.0 - Tammar wallaby
NoYes   Sarcophilus harrisii 69_7.0 - Tasmanian devil
NoYes   Monodelphis domestica 69_5 - Gray short-tailed opossum
NoYes   Ornithorhynchus anatinus 69_5 - Platypus
NoYes   Petromyzon marinus 69_7.0 - Sea lamprey
NoYes   Meleagris gallopavo 69_2 - Turkey
NoYes   Gallus gallus 69_2 - Chicken
NoYes   Taeniopygia guttata 69_3.2.4 - Zebra finch
NoYes   Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtle
NoYes   Anolis carolinensis 69_2.0 - Green anole
NoYes   Xenopus tropicalis 69_4.2 - Tropical clawed frog
NoYes   Latimeria chalumnae 69_1 - Coelacanth
NoYes   Gadus morhua 69_1 - Atlantic cod
NoYes   Tetraodon nigroviridis 69_8 - Spotted green pufferfish
NoYes   Takifugu rubripes 69_4 - Torafugu
NoYes   Gasterosteus aculeatus 69_1 - Three-spined stickleback
NoYes   Oryzias latipes 69_1 - Japanese medaka
NoYes   Xiphophorus maculatus 69_4.4.2 - Southern platyfish
NoYes   Oreochromis niloticus 69_1.0 - Nile tilapia
NoYes   Danio rerio 69_9 - Zebrafish
NoYes   Ciona savignyi 69_2.0 - Pacific transparent sea squirt
NoYes   Ciona intestinalis 69 - Vase tunicate
NoYes   Drosophila melanogaster 69_5 - Fruit fly
NoYes   Caenorhabditis elegans 69_215 - Roundworm
NoYes   Homo sapiens 75_37 - Human
NoYes   Homo sapiens - Human
NoYes   Mus musculus 63_37 (longest transcript per gene) - House mouse
NoYes   Loa loa v3.3 - Eye worm
NoYes   Wuchereria bancrofti v1.0 - Agent of lymphatic filariasis
NoYes   NCBI 2017_08 genome
NoYes   Protozoadb 2010_08 (Protozoadb)
NoYes   Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)
NoYes   Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)
NoYes   Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)
NoYes   STRING v9.0.5 (STRING)
NoYes   Uniprot 2018_03 genome
NoYes   Global Ocean Sampling Expedition (GOS)
NoYes   PDB chains (SCOP 1.75) (PDB)
NoYes   Protein Data Bank (all PDB sequenc)
NoYes   SCOP2 SCOPe CATH ECOD (all domain sequ)
NoYes   TargetDB (Targets)
NoYes   ALL (only advised for small superfamilies)


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