Select to display Genome
No Yes  
Anopheles gambiae 55 (pseudogenes) - African malaria mosquito
No Yes  
Canis familiaris 58 (pseudogenes) - Dog
No Yes  
Danio rerio 58 (pseudogenes) - Zebrafish
No Yes  
Gallus gallus 58 (pseudogene) - Chicken
No Yes  
Homo sapiens 58 (pseudogenes) - Human
No Yes  
Mus musculus 56 (pseudogenes) - House mouse
No Yes  
Pan troglodytes 58 (pseudogenes) - Chimpanzee
No Yes  
Rattus norvegicus 58 (pseudogenes) - Norway rat
No Yes  
Homo sapiens 76_38 - Human
No Yes  
Pan troglodytes 76_2.1.4 - Chimpanzee
No Yes  
Gorilla gorilla 76_3.1 - Western gorilla
No Yes  
Pongo abelii 76_2 - Sumatran orangutan
No Yes  
Tarsius syrichta 76_1
No Yes  
Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbon
No Yes  
Papio anubis 76 - Olive baboon
No Yes  
Macaca mulatta 76_1 - Rhesus monkey
No Yes  
Callithrix jacchus 76_3.2.1 - White-tufted-ear marmoset
No Yes  
Otolemur garnettii 76_3 - Small-eared galago
No Yes  
Microcebus murinus 76_1 - Gray mouse lemur
No Yes  
Physcomitrella patens subsp. patens 22
No Yes  
Rattus norvegicus 76_5.0 - Norway rat
No Yes  
Mus musculus 76_38 - House mouse
No Yes  
Dipodomys ordii 76_1 - Ord's kangaroo rat
No Yes  
Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrel
No Yes  
Heterocephalus glaber v1.7-2 - Naked mole-rat
No Yes  
Cavia porcellus 76_3 - Domestic guinea pig
No Yes  
Oryctolagus cuniculus 76_2 - Rabbit
No Yes  
Ochotona princeps 76 - American pika
No Yes  
Tupaia belangeri 76 - Northern tree shrew
No Yes  
Sus scrofa 76_10.2 - Pig
No Yes  
Bos taurus 76_3.1 - Cattle
No Yes  
Ovis aries 76_3.1 - Sheep
No Yes  
Vicugna pacos 76_1 - Alpaca
No Yes  
Tursiops truncatus 76_1 - Bottlenose dolphin
No Yes  
Mustela putorius furo 76_1.0 - Domestic ferret
No Yes  
Ailuropoda melanoleuca 76_1 - Giant panda
No Yes  
Canis familiaris 76_3.1 - Dog
No Yes  
Felis catus 76_6.2 - Domestic cat
No Yes  
Equus caballus 76_2 - Horse
No Yes  
Myotis lucifugus 76_2.0 - Little brown bat
No Yes  
Pteropus vampyrus 76_1 - Large flying fox
No Yes  
Sorex araneus 76_1 - European shrew
No Yes  
Erinaceus europaeus 76 - Western European hedgehog
No Yes  
Procavia capensis 76_1 - Cape rock hyrax
No Yes  
Loxodonta africana 76_3 - African savanna elephant
No Yes  
Echinops telfairi 76 - Small Madagascar hedgehog
No Yes  
Dasypus novemcinctus 76_2 - Nine-banded armadillo
No Yes  
Choloepus hoffmanni 76_1 - Hoffmann's two-fingered sloth
No Yes  
Macropus eugenii 76_1.0 - Tammar wallaby
No Yes  
Sarcophilus harrisii 76_7.0 - Tasmanian devil
No Yes  
Monodelphis domestica 76_5 - Gray short-tailed opossum
No Yes  
Ornithorhynchus anatinus 76_5 - Platypus
No Yes  
Saccoglossus kowalevskii v3.0
No Yes  
Petromyzon marinus 76_7.0 - Sea lamprey
No Yes  
Meleagris gallopavo 76_2 - Turkey
No Yes  
Gallus gallus 76_4 - Chicken
No Yes  
Anas platyrhynchos 76_1.0 - Mallard
No Yes  
Taeniopygia guttata 76_3.2.4 - Zebra finch
No Yes  
Ficedula albicollis 76_1.0 - Collared flycatcher
No Yes  
Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtle
No Yes  
Anolis carolinensis 76_2.0 - Green anole
No Yes  
Xenopus laevis - African clawed frog
No Yes  
Xenopus tropicalis 76_4.2 - Tropical clawed frog
No Yes  
Latimeria chalumnae 76_1 - Coelacanth
No Yes  
Lepisosteus oculatus 76 - Spotted gar
No Yes  
Gadus morhua 76_1 - Atlantic cod
No Yes  
Tetraodon nigroviridis 76_8 - Spotted green pufferfish
No Yes  
Takifugu rubripes 76_4 - Torafugu
No Yes  
Gasterosteus aculeatus 76_1 - Three-spined stickleback
No Yes  
Oryzias latipes 76_1 - Japanese medaka
No Yes  
Xiphophorus maculatus 76_4.4.2 - Southern platyfish
No Yes  
Poecilia formosa 76 - Amazon molly
No Yes  
Oreochromis niloticus 76_1.0 - Nile tilapia
No Yes  
Astyanax mexicanus 76 - Mexican tetra
No Yes  
Danio rerio 76_9 - Zebrafish
No Yes  
Oikopleura dioica
No Yes  
Ciona savignyi 76_2.0 - Pacific transparent sea squirt
No Yes  
Ciona intestinalis 76 - Vase tunicate
No Yes  
Strongylocentrotus purpuratus v3.1 - Purple sea urchin
No Yes  
Adineta vaga
No Yes  
Octopus bimaculoides 280
No Yes  
Crassostrea gigas 22 - Pacific oyster
No Yes  
Lottia gigantea - Owl limpet
No Yes  
Helobdella robusta
No Yes  
Capitella sp. I
No Yes  
Danaus plexippus OGS1.0 - Monarch butterfly
No Yes  
Heliconius melpomene - Postman butterfly
No Yes  
Bombyx mori - Domestic silkworm
No Yes  
Nasonia vitripennis - Jewel wasp
No Yes  
Apis mellifera 38.2d - Honey bee
No Yes  
Harpegnathos saltator v3.3 - Jerdon's jumping ant
No Yes  
Linepithema humile v1.1 - Argentine ant
No Yes  
Pogonomyrmex barbatus v1.2 - Red harvester ant
No Yes  
Solenopsis invicta v.2.2.3 - Red fire ant
No Yes  
Acromyrmex echinatior v3.8 - Panamanian leafcutter ant
No Yes  
Atta cephalotes v1.1
No Yes  
Camponotus floridanus v3.3 - Florida carpenter ant
No Yes  
Lucilia cuprina - Australian sheep blowfly
No Yes  
Drosophila grimshawi 1.3
No Yes  
Drosophila willistoni 1.3
No Yes  
Drosophila pseudoobscura 2.13
No Yes  
Drosophila persimilis 1.3
No Yes  
Drosophila suzukii
No Yes  
Drosophila yakuba 1.3
No Yes  
Drosophila simulans 1.3
No Yes  
Drosophila sechellia 1.3
No Yes  
Drosophila melanogaster 76_5 - Fruit fly
No Yes  
Drosophila erecta 1.3
No Yes  
Drosophila ananassae 1.3
No Yes  
Drosophila virilis 1.2
No Yes  
Drosophila mojavensis 1.3
No Yes  
Megaselia scalaris 22
No Yes  
Aedes aegypti 55 - Yellow fever mosquito
No Yes  
Culex pipiens quinquefasciatus - Southern house mosquito
No Yes  
Anopheles darlingi 22 - American malaria mosquito
No Yes  
Anopheles gambiae 49_3j - African malaria mosquito
No Yes  
Tribolium castaneum 3.0 - Red flour beetle
No Yes  
Pediculus humanus corporis - Human body louse
No Yes  
Acyrthosiphon pisum - Pea aphid
No Yes  
Rhodnius prolixus 22
No Yes  
Daphnia pulex - Common water flea
No Yes  
Strigamia maritima 22
No Yes  
Sarcoptes scabiei
No Yes  
Tetranychus urticae - Two-spotted spider mite
No Yes  
Ixodes scapularis - Black-legged tick
No Yes  
Pristionchus pacificus
No Yes  
Meloidogyne incognita - Southern root-knot nematode
No Yes  
Onchocerca volvulus 22
No Yes  
Brugia malayi WS250 - Agent of lymphatic filariasis
No Yes  
Caenorhabditis japonica
No Yes  
Caenorhabditis brenneri
No Yes  
Caenorhabditis remanei
No Yes  
Caenorhabditis elegans 76_235 - Roundworm
No Yes  
Caenorhabditis briggsae 2
No Yes  
Trichinella spiralis 22
No Yes  
Hymenolepis microstoma
No Yes  
Echinococcus multilocularis
No Yes  
Echinococcus granulosus
No Yes  
Taenia solium - Pork tapeworm
No Yes  
Schistosoma mansoni
No Yes  
Mnemiopsis leidyi - Sea walnut
No Yes  
Thelohanellus kitauei
No Yes  
Acropora digitifera v1.0
No Yes  
Nematostella vectensis 1.0 - Starlet sea anemone
No Yes  
Hydra vulgaris
No Yes  
Trichoplax adhaerens
No Yes  
Conidiobolus coronatus NRRL28638 v1.0
No Yes  
Fusarium verticillioides 7600
No Yes  
Microsporum gypseum
No Yes  
Microsporum canis CBS 113480
No Yes  
Trichophyton equinum CBS 127.97
No Yes  
Trichophyton verrucosum HKI 0517
No Yes  
Arthroderma benhamiae CBS 112371
No Yes  
Trichophyton tonsurans CBS 112818
No Yes  
Trichophyton rubrum CBS 118892
No Yes  
Tuber melanosporum Mel28 22
No Yes  
Tuber melanosporum Vittad - Perigord truffle
No Yes  
Entamoeba dispar 1.2
No Yes  
Entamoeba invadens 1.2
No Yes  
Entamoeba histolytica 1
No Yes  
Selaginella moellendorffii
No Yes  
Pinus taeda - Loblolly pine
No Yes  
Picea abies - Norway spruce
No Yes  
Eucalyptus grandis v201 - Rose gum
No Yes  
Theobroma cacao B97-61/B2 v1 - Cacao
No Yes  
Gossypium raimondii v221
No Yes  
Citrus clementina v165
No Yes  
Citrus sinensis v154 - Sweet orange
No Yes  
Thellungiella halophila v173
No Yes  
Brassica rapa Chiifu-401 1.2 - Field mustard
No Yes  
Capsella rubella v183
No Yes  
Arabidopsis lyrata - Lyrate rockcress
No Yes  
Arabidopsis thaliana 10 - Thale cress
No Yes  
Carica papaya - Papaya
No Yes  
Medicago truncatula - Barrel medic
No Yes  
Phaseolus vulgaris v186 - String bean
No Yes  
Glycine max v109 - Soybean
No Yes  
Cucumis sativus v122 - Cucumber
No Yes  
Fragaria vesca - Wild strawberry
No Yes  
Malus domestica v196 - Apple
No Yes  
Prunus persica v139 - Peach
No Yes  
Linum usitatissimum v200 - Flax
No Yes  
Manihot esculenta v147 - Cassava
No Yes  
Populus trichocarpa v156 - Black cottonwood
No Yes  
Vitis vinifera - Wine grape
No Yes  
Mimulus guttatus v140 - Spotted monkey flower
No Yes  
Solanum lycopersicum v.2.3 - Tomato
No Yes  
Solanum tuberosum - Potato
No Yes  
Actinidia chinensis Hongyang
No Yes  
Aquilegia coerulea v195
No Yes  
Triticum urartu 22
No Yes  
Triticum aestivum 22 - Bread wheat
No Yes  
Aegilops tauschii 22
No Yes  
Brachypodium distachyon - Stiff brome
No Yes  
Oryza barthii 22 - African wild rice
No Yes  
Oryza meridionalis 22
No Yes  
Oryza glumaepatula 22
No Yes  
Oryza glaberrima - African rice
No Yes  
Oryza punctata 22
No Yes  
Oryza nivara 22
No Yes  
Oryza brachyantha 22 - Malo sina
No Yes  
Oryza sativa ssp. japonica 5.0 - Japanese rice
No Yes  
Oryza sativa v193 - Rice
No Yes  
Phyllostachys heterocycla var. pubescens - Mosochiku
No Yes  
Panicum virgatum v202 - Switchgrass
No Yes  
Setaria italica v164 - Foxtail millet
No Yes  
Zea mays subsp. mays - Maize
No Yes  
Zea mays v181 - Maize
No Yes  
Sorghum bicolor - Sorghum
No Yes  
Musa balbisiana - Balbis banana
No Yes  
Musa acuminata 22 - Wild Malaysian banana
No Yes  
Amborella trichopoda 22
No Yes  
Physcomitrella patens
No Yes  
Chlorella variabilis sp. NC64A
No Yes  
Volvox carteri f. nagariensis
No Yes  
Volvox carteri v199
No Yes  
Chlamydomonas reinhardtii 4.0
No Yes  
Porphyridium purpureum 02_2012
No Yes  
Giardia lamblia 2.3
No Yes  
Thalassiosira pseudonana CCMP1335
No Yes  
Perkinsus marinus ATCC 50983
No Yes  
Tetrahymena thermophila SB210 1
No Yes  
Ichthyophthirius multifiliis strain G5
No Yes  
Neospora caninum
No Yes  
Toxoplasma gondii VEG
No Yes  
Toxoplasma gondii ME49
No Yes  
Toxoplasma gondii GT1
No Yes  
Naegleria gruberi
No Yes  
Guillardia theta CCMP2712 v1.0
No Yes  
Emiliania huxleyi CCMP1516
No Yes  
Microcoleus sp. PCC 7113
No Yes  
Gloeocapsa sp. PCC 7428
No Yes  
Gloeobacter violaceus PCC 7421
No Yes  
Rivularia sp. PCC 7116
No Yes  
Calothrix sp. PCC 7507
No Yes  
Anabaena variabilis ATCC 29413
No Yes  
Nostoc sp. PCC 7107
No Yes  
Nostoc punctiforme PCC 73102
No Yes  
Nostoc sp. PCC 7120
No Yes  
Nostoc sp. PCC 7524
No Yes  
Eggerthella sp. YY7918
No Yes  
Eggerthella lenta DSM 2243
No Yes  
Olsenella uli DSM 7084
No Yes  
Catenulispora acidiphila DSM 44928
No Yes  
Thermobifida fusca YX
No Yes  
Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
No Yes  
Streptosporangium roseum DSM 43021
No Yes  
Streptomyces sp. PAMC26508
No Yes  
Streptomyces flavogriseus ATCC 33331
No Yes  
Streptomyces sp. SirexAA-E
No Yes  
Streptomyces griseus subsp. griseus NBRC 13350
No Yes  
Actinosynnema mirum DSM 43827
No Yes  
Saccharomonospora viridis DSM 43017
No Yes  
Saccharopolyspora erythraea NRRL 2338
No Yes  
Amycolatopsis mediterranei U32
No Yes  
Verrucosispora maris AB-18-032
No Yes  
Amycolicicoccus subflavus DQS3-9A1
No Yes  
Beutenbergia cavernae DSM 12333
No Yes  
Brachybacterium faecium DSM 4810
No Yes  
Xylanimonas cellulosilytica DSM 15894
No Yes  
[Cellvibrio] gilvus ATCC 13127
No Yes  
Arthrobacter phenanthrenivorans Sphe3
No Yes  
Arthrobacter aurescens TC1
No Yes  
Arthrobacter sp. Rue61a
No Yes  
Arthrobacter sp. FB24
No Yes  
Renibacterium salmoninarum ATCC 33209
No Yes  
Bifidobacterium longum subsp. longum JDM301
No Yes  
Bifidobacterium dentium Bd1
No Yes  
Bifidobacterium breve ACS-071-V-Sch8b
No Yes  
Actinomyces sp. F0330
No Yes  
Dehalococcoides ethenogenes 195
No Yes  
Dehalococcoides sp. BAV1
No Yes  
Dehalogenimonas lykanthroporepellens BL-DC-9
No Yes  
Natranaerobius thermophilus JW/NM-WN-LF
No Yes  
Symbiobacterium thermophilum IAM 14863
No Yes  
Clostridium clariflavum DSM 19732
No Yes  
Eubacterium siraeum
No Yes  
Clostridium thermocellum ATCC 27405
No Yes  
Ruminococcus albus 7
No Yes  
Desulfosporosinus orientis DSM 765
No Yes  
Syntrophobotulus glycolicus DSM 8271
No Yes  
Desulfitobacterium hafniense Y51
No Yes  
Desulfitobacterium dehalogenans ATCC 51507
No Yes  
Desulfotomaculum acetoxidans DSM 771
No Yes  
Acetobacterium woodii DSM 1030
No Yes  
Eubacterium limosum KIST612
No Yes  
Clostridium phytofermentans ISDg
No Yes  
Coprococcus sp. ART55/1
No Yes  
Roseburia hominis A2-183
No Yes  
Roseburia intestinalis
No Yes  
Butyrivibrio fibrisolvens
No Yes  
Alkaliphilus metalliredigens QYMF
No Yes  
Clostridium ljungdahlii DSM 13528
No Yes  
Clostridium kluyveri DSM 555
No Yes  
Thermodesulfobium narugense DSM 14796
No Yes  
Thermoanaerobacter tengcongensis MB4
No Yes  
Paenibacillus mucilaginosus 3016
No Yes  
Oceanobacillus iheyensis HTE831
No Yes  
Bacillus atrophaeus 1942
No Yes  
Bacillus licheniformis DSM 13 = ATCC 14580
No Yes  
Bacillus cellulosilyticus DSM 2522
No Yes  
Gemmatimonas aurantiaca T-27
No Yes  
Chlorobium limicola DSM 245
No Yes  
Haliscomenobacter hydrossis DSM 1100
No Yes  
Salinibacter ruber M8
No Yes  
Cyclobacterium marinum DSM 745
No Yes  
Leadbetterella byssophila DSM 17132
No Yes  
Dyadobacter fermentans DSM 18053
No Yes  
Spirosoma linguale DSM 74
No Yes  
Runella slithyformis DSM 19594
No Yes  
Tannerella forsythia ATCC 43037
No Yes  
Paludibacter propionicigenes WB4
No Yes  
Prevotella melaninogenica ATCC 25845
No Yes  
Prevotella ruminicola 23
No Yes  
Porphyromonas asaccharolytica DSM 20707
No Yes  
Pedobacter heparinus DSM 2366
No Yes  
Candidatus Protochlamydia amoebophila UWE25
No Yes  
Simkania negevensis Z
No Yes  
Planctomyces brasiliensis DSM 5305
No Yes  
Fretibacterium fastidiosum
No Yes  
Sphaerochaeta pleomorpha str. Grapes
No Yes  
Sphaerochaeta globus str. Buddy
No Yes  
Thermodesulfobacterium sp. OPB45
No Yes  
Calditerrivibrio nitroreducens DSM 19672
No Yes  
Thermotoga lettingae TMO
No Yes  
Thermotoga thermarum DSM 5069
No Yes  
Sulfurihydrogenibium sp. YO3AOP1
No Yes  
Dictyoglomus turgidum DSM 6724
No Yes  
Dictyoglomus thermophilum H-6-12
No Yes  
Candidatus Chloracidobacterium thermophilum B
No Yes  
Desulfomonile tiedjei DSM 6799
No Yes  
Hippea maritima DSM 10411
No Yes  
Sorangium cellulosum 'So ce 56'
No Yes  
Anaeromyxobacter sp. Fw109-5
No Yes  
Stigmatella aurantiaca DW4/3-1
No Yes  
Myxococcus xanthus DK 1622
No Yes  
Rhizobium leguminosarum bv. viciae 3841
No Yes  
Rhodomicrobium vannielii ATCC 17100
No Yes  
Cenarchaeum symbiosum A
No Yes  
Candidatus Korarchaeum cryptofilum OPF8
No Yes  
Thermofilum sp. 1910b
No Yes  
Pyrobaculum sp. 1860
No Yes  
Pyrobaculum calidifontis JCM 11548
No Yes  
Pyrobaculum arsenaticum DSM 13514
No Yes  
Thermoproteus neutrophilus V24Sta
No Yes  
Pyrobaculum aerophilum str. IM2
No Yes  
Pyrobaculum islandicum DSM 4184
No Yes  
Methanococcoides burtonii DSM 6242
No Yes  
Methanosarcina acetivorans C2A
No Yes  
Methanosarcina mazei Go1
No Yes  
Methanosphaerula palustris E1-9c
No Yes  
Methanoplanus petrolearius DSM 11571
No Yes  
Methanoculleus bourgensis MS2
No Yes  
Methanoculleus marisnigri JR1
No Yes  
Thermococcus sp. 4557
No Yes  
Thermococcus kodakarensis KOD1
No Yes  
Thermococcus gammatolerans EJ3
No Yes  
Halopiger xanaduensis SH-6
No Yes  
Haloterrigena turkmenica DSM 5511
No Yes  
Natrialba magadii ATCC 43099
No Yes  
Haloferax mediterranei ATCC 33500
No Yes  
Haloferax volcanii DS2
No Yes  
Aciduliprofundum sp. MAR08-339
No Yes  
Aciduliprofundum boonei T469
No Yes  
Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frog
No Yes  
Drosophila melanogaster FlyBase 5.12 - Fruit fly
No Yes  
Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquito
No Yes  
Ascaris suum Victoria/Ghent - Pig roundworm
No Yes  
Caenorhabditis elegans WormBase WS218 - Roundworm
No Yes  
Theobroma cacao Matina 1-6 v0.9 - Cacao
No Yes  
Hordeum vulgare 22 - Domesticated barley
No Yes  
Oryza sativa ssp. Indica - Long-grained rice
No Yes  
Neospora caninum Nc-Liverpool 6.2
No Yes  
Synechococcus sp. JA-2-3B'a(2-13)
No Yes  
Synechococcus sp. JA-3-3Ab
No Yes  
Oscillatoria nigro-viridis PCC 7112
No Yes  
Oscillatoria acuminata PCC 6304
No Yes  
Arthrospira platensis NIES-39
No Yes  
Cyanothece sp. PCC 7822
No Yes  
Cyanothece sp. PCC 7425
No Yes  
Cyanothece sp. PCC 7424
No Yes  
Cyanothece sp. ATCC 51142
No Yes  
Cyanobacterium stanieri PCC 7202
No Yes  
Gloeobacter kilaueensis Gloeobacter sp. JS
No Yes  
Pleurocapsa minor Pleurocapsa sp. PCC 7327
No Yes  
Calothrix parietina Calothrix sp. PCC 6303
No Yes  
Gordonibacter pamelaeae 7-10-1-b
No Yes  
Frankia sp. EuI1c
No Yes  
Nocardiopsis alba ATCC BAA-2165
No Yes  
Streptomyces albus J1074
No Yes  
Streptomyces fulvissimus DSM 40593
No Yes  
Saccharothrix espanaensis DSM 44229
No Yes  
Amycolatopsis mediterranei RB
No Yes  
Amycolatopsis mediterranei S699
No Yes  
Amycolatopsis mediterranei S699
No Yes  
Amycolatopsis orientalis HCCB10007
No Yes  
Mycobacterium kansasii ATCC 12478
No Yes  
Bifidobacterium longum NCC2705
No Yes  
Bifidobacterium longum DJO10A
No Yes  
Bifidobacterium longum subsp. infantis 157F
No Yes  
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222
No Yes  
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222
No Yes  
Bifidobacterium longum subsp. longum KACC 91563
No Yes  
Bifidobacterium longum subsp. longum BBMN68
No Yes  
Bifidobacterium longum subsp. longum F8
No Yes  
Bifidobacterium longum subsp. longum JCM 1217
No Yes  
Bifidobacterium breve UCC2003
No Yes  
Actinomyces viscosus C505
No Yes  
Dehalococcoides mccartyi GY50
No Yes  
Dehalococcoides mccartyi DCMB5
No Yes  
Dehalococcoides mccartyi BTF08
No Yes  
Dehalococcoides sp. GT
No Yes  
Dehalococcoides sp. VS
No Yes  
Dehalococcoides sp. CBDB1
No Yes  
Clostridium thermocellum DSM 1313
No Yes  
[Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532
No Yes  
Desulfitobacterium dichloroeliminans LMG P-21439
No Yes  
Desulfitobacterium hafniense DCB-2
No Yes  
Desulfotomaculum gibsoniae DSM 7213
No Yes  
Clostridium autoethanogenum DSM 10061
No Yes  
Clostridium kluyveri NBRC 12016
No Yes  
Paenibacillus sp. Y412MC10
No Yes  
Paenibacillus mucilaginosus KNP414
No Yes  
Paenibacillus mucilaginosus K02
No Yes  
Bacillus licheniformis 9945A
No Yes  
Bacillus subtilis subsp. spizizenii TU-B-10
No Yes  
Bacillus subtilis subsp. spizizenii str. W23
No Yes  
Bacillus licheniformis DSM 13 = ATCC 14580
No Yes  
Chlorobium phaeobacteroides BS1
No Yes  
Salinibacter ruber DSM 13855
No Yes  
Emticicia oligotrophica DSM 17448
No Yes  
Sorangium cellulosum So0157-2
No Yes  
Myxococcus stipitatus DSM 14675
No Yes  
Rhizobium etli CFN 42
No Yes  
Rhizobium etli bv. mimosae str. Mim1
No Yes  
Rhizobium leguminosarum bv. trifolii WSM2304
No Yes  
Rhizobium leguminosarum bv. trifolii WSM1325
No Yes  
Methanosarcina mazei Tuc01
No Yes  
Methanoregula formicica Methanoregula formicicum SMSP
No Yes  
Thermococcus sp. AM4
No Yes  
Thermococcus litoralis DSM 5473
No Yes  
Halorhabdus tiamatea SARL4B
No Yes  
Homo sapiens 69_37 - Human
No Yes  
Pan troglodytes 69_2.1.4 - Chimpanzee
No Yes  
Gorilla gorilla 69_3.1 - Western gorilla
No Yes  
Pongo abelii 69_2 - Sumatran orangutan
No Yes  
Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbon
No Yes  
Macaca mulatta 69_1 - Rhesus monkey
No Yes  
Callithrix jacchus 69_3.2.1 - White-tufted-ear marmoset
No Yes  
Otolemur garnettii 69_3 - Small-eared galago
No Yes  
Tarsius syrichta 69_1
No Yes  
Microcebus murinus 69_1 - Gray mouse lemur
No Yes  
Rattus norvegicus 69_3.4 - Norway rat
No Yes  
Mus musculus 69_38 - House mouse
No Yes  
Dipodomys ordii 69_1 - Ord's kangaroo rat
No Yes  
Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrel
No Yes  
Cavia porcellus 69_3 - Domestic guinea pig
No Yes  
Oryctolagus cuniculus 69_2 - Rabbit
No Yes  
Ochotona princeps 69 - American pika
No Yes  
Tupaia belangeri 69 - Northern tree shrew
No Yes  
Sus scrofa 69_10.2 - Pig
No Yes  
Bos taurus 69_3.1 - Cattle
No Yes  
Vicugna pacos 69_1 - Alpaca
No Yes  
Tursiops truncatus 69_1 - Bottlenose dolphin
No Yes  
Mustela putorius furo 69_1.0 - Domestic ferret
No Yes  
Ailuropoda melanoleuca 69_1 - Giant panda
No Yes  
Canis familiaris 69_3.1 - Dog
No Yes  
Felis catus 69 - Domestic cat
No Yes  
Equus caballus 69_2 - Horse
No Yes  
Myotis lucifugus 69_2.0 - Little brown bat
No Yes  
Pteropus vampyrus 69_1 - Large flying fox
No Yes  
Sorex araneus 69_1 - European shrew
No Yes  
Erinaceus europaeus 69 - Western European hedgehog
No Yes  
Procavia capensis 69_1 - Cape rock hyrax
No Yes  
Loxodonta africana 69_3 - African savanna elephant
No Yes  
Echinops telfairi 69 - Small Madagascar hedgehog
No Yes  
Dasypus novemcinctus 69_2 - Nine-banded armadillo
No Yes  
Choloepus hoffmanni 69_1 - Hoffmann's two-fingered sloth
No Yes  
Macropus eugenii 69_1.0 - Tammar wallaby
No Yes  
Sarcophilus harrisii 69_7.0 - Tasmanian devil
No Yes  
Monodelphis domestica 69_5 - Gray short-tailed opossum
No Yes  
Ornithorhynchus anatinus 69_5 - Platypus
No Yes  
Petromyzon marinus 69_7.0 - Sea lamprey
No Yes  
Meleagris gallopavo 69_2 - Turkey
No Yes  
Gallus gallus 69_2 - Chicken
No Yes  
Taeniopygia guttata 69_3.2.4 - Zebra finch
No Yes  
Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtle
No Yes  
Anolis carolinensis 69_2.0 - Green anole
No Yes  
Xenopus tropicalis 69_4.2 - Tropical clawed frog
No Yes  
Latimeria chalumnae 69_1 - Coelacanth
No Yes  
Gadus morhua 69_1 - Atlantic cod
No Yes  
Tetraodon nigroviridis 69_8 - Spotted green pufferfish
No Yes  
Takifugu rubripes 69_4 - Torafugu
No Yes  
Gasterosteus aculeatus 69_1 - Three-spined stickleback
No Yes  
Oryzias latipes 69_1 - Japanese medaka
No Yes  
Xiphophorus maculatus 69_4.4.2 - Southern platyfish
No Yes  
Oreochromis niloticus 69_1.0 - Nile tilapia
No Yes  
Danio rerio 69_9 - Zebrafish
No Yes  
Ciona savignyi 69_2.0 - Pacific transparent sea squirt
No Yes  
Ciona intestinalis 69 - Vase tunicate
No Yes  
Drosophila melanogaster 69_5 - Fruit fly
No Yes  
Caenorhabditis elegans 69_215 - Roundworm
No Yes  
Arabidopsis thaliana 10 - Thale cress
No Yes  
Homo sapiens 75_37 - Human
No Yes  
Homo sapiens - Human
No Yes  
Mus musculus 63_37 (longest transcript per gene) - House mouse
No Yes  
Heliconius numata
No Yes  
Loa loa v3.3 - Eye worm
No Yes  
Wuchereria bancrofti v1.0 - Agent of lymphatic filariasis
No Yes  
Brugia malayi v1.0 - Agent of lymphatic filariasis
No Yes  
Lotus japonicus
No Yes  
Malus x domestica - Apple
No Yes  
Ricinus communis - Castor bean
No Yes  
Nicotiana benthamiana 0.4.4
No Yes  
Solanum pimpinellifolium A-1.0 - Currant tomato
No Yes  
Solanum lycopersicum v2.3 - Tomato
No Yes  
2_050719S (meta-genome)
No Yes  
3_050719R (meta-genome)
No Yes  
4_050719Q (meta-genome)
No Yes  
5_050719P (meta-genome)
No Yes  
7_Oxygen_minimum_layer (meta-genome)
No Yes  
Air microbial communities Singapore indoor air filters 2 (meta-genome)
No Yes  
Bath Hot Springs, filamentous community (meta-genome)
No Yes  
Bath Hot Springs, planktonic community (meta-genome)
No Yes  
Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes
No Yes  
Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)
No Yes  
Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)
No Yes  
Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)
No Yes  
Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)
No Yes  
Human Gut Community Subject 7 (meta-genome)
No Yes  
Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)
No Yes  
Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)
No Yes  
Mouse Gut Community ob1 (meta-genome)
No Yes  
NCBI 2017_08 genome
No Yes  
Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)
No Yes  
Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)
No Yes  
Protozoadb 2010_08 (Protozoadb)
No Yes  
simLC - Simulated Low Complexity Metagenome (meta-genome)
No Yes  
simMC - Simulated Medium Complexity Metagenome (meta-genome)
No Yes  
Soil microbial communities from Minnesota Farm (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)
No Yes  
Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)
No Yes  
STRING v9.0.5 (STRING)
No Yes  
Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)
No Yes  
Uniprot 2018_03 genome
No Yes  
Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)
No Yes  
Global Ocean Sampling Expedition (GOS)
No Yes  
NCBI plasmid sequences (Plasmids)
No Yes  
NCBI viral sequences (Viral)
No Yes  
PDB chains (SCOP 1.75 ) (PDB)
No Yes  
Protein Data Bank (all PDB sequenc)
No Yes  
SCOP2 SCOPe CATH ECOD (all domain sequ)
No Yes  
TargetDB (Targets)
No Yes  
UniProt viral sequences (Viral)
No Yes
ALL (only advised for small superfamilies)