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Home > SCOP hierarchy > MTH1598-like > Alignments

MTH1598-like alignments

These alignments are sequences aligned to the 0039380 model.

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The numbers along the top are the segment numbers of the HMM states, and each sequence is seperately aligned to the model.
The first sequence is the seed the model was built from.
Upper case letters are aligned, lower case letters are insertions, '-' signifies a deletion and '.' is nothing.

                 10        20        30        40           50        60        70                  
                  |         |         |         |            |         |         |                  
d1j5ua_ h-HHMRKPIEHTADIAYEISGNSYEELLEEARNILLEEEGIVLDTE...EKEKMYPLEETEDAFFDTVNDWILEISKGWAPW..........
d1jw3a_ m--KGFEFFDVTADAGFWAYGHDLEEVFENAALAMFEVMTDTSLVEaaeERRVEITSEDRVSLLYDWLDELLFIHDTEFILFskfkvkidek


          80        90       100       110       120        
           |         |         |         |         |        
d1j5ua_ ..RIKREGNELKVTFRKIRKKEGTEIKALTYHLLKFERDGDVLKTKVVFD-t
d1jw3a_ ddGLHLTGTAMGEEI-KEGHERRDEVKAVTFHMMEILDEDGLIKARVILDL.


Statistics on alignment.	Save alignment.

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Refine alignments

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Members of the same:	including
Include all superfamily members:	, or just those assigned by the selected model:
Initial T99 seed sequence:	NoYes

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Model: 0039380 (list models)

Initial SAMT99 seed:
Alignment:

Display Options:

Output in FASTA-like format:	NoYes
Output column indices:	NoYes
Sequence index (number) on each line:	NoYes

Max number of insertions shown:	(0 does not show insertions)
Characters per line:
Character to show inserts:
Maximum number of sequences:
Exclude sequences shorter than:	residues

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Add alignments from genomes

Select below additional genomes you would like to see alignments for, then click on 'Re-Submit'. The genome assignments will be added to this page.

Select to display	Genome
NoYes	Canis familiaris 58 (pseudogenes) - Dog
NoYes	Homo sapiens 58 (pseudogenes) - Human
NoYes	Pan troglodytes 58 (pseudogenes) - Chimpanzee
NoYes	Homo sapiens 76_38 - Human
NoYes	Gorilla gorilla 76_3.1 - Western gorilla
NoYes	Pongo abelii 76_2 - Sumatran orangutan
NoYes	Tarsius syrichta 76_1
NoYes	Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbon
NoYes	Macaca mulatta 76_1 - Rhesus monkey
NoYes	Otolemur garnettii 76_3 - Small-eared galago
NoYes	Microcebus murinus 76_1 - Gray mouse lemur
NoYes	Rattus norvegicus 76_5.0 - Norway rat
NoYes	Mus musculus 76_38 - House mouse
NoYes	Dipodomys ordii 76_1 - Ord's kangaroo rat
NoYes	Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrel
NoYes	Heterocephalus glaber v1.7-2 - Naked mole-rat
NoYes	Cavia porcellus 76_3 - Domestic guinea pig
NoYes	Oryctolagus cuniculus 76_2 - Rabbit
NoYes	Ochotona princeps 76 - American pika
NoYes	Sus scrofa 76_10.2 - Pig
NoYes	Bos taurus 76_3.1 - Cattle
NoYes	Ovis aries 76_3.1 - Sheep
NoYes	Vicugna pacos 76_1 - Alpaca
NoYes	Tursiops truncatus 76_1 - Bottlenose dolphin
NoYes	Mustela putorius furo 76_1.0 - Domestic ferret
NoYes	Ailuropoda melanoleuca 76_1 - Giant panda
NoYes	Canis familiaris 76_3.1 - Dog
NoYes	Felis catus 76_6.2 - Domestic cat
NoYes	Equus caballus 76_2 - Horse
NoYes	Myotis lucifugus 76_2.0 - Little brown bat
NoYes	Pteropus vampyrus 76_1 - Large flying fox
NoYes	Sorex araneus 76_1 - European shrew
NoYes	Erinaceus europaeus 76 - Western European hedgehog
NoYes	Procavia capensis 76_1 - Cape rock hyrax
NoYes	Echinops telfairi 76 - Small Madagascar hedgehog
NoYes	Dasypus novemcinctus 76_2 - Nine-banded armadillo
NoYes	Choloepus hoffmanni 76_1 - Hoffmann's two-fingered sloth
NoYes	Macropus eugenii 76_1.0 - Tammar wallaby
NoYes	Sarcophilus harrisii 76_7.0 - Tasmanian devil
NoYes	Monodelphis domestica 76_5 - Gray short-tailed opossum
NoYes	Ornithorhynchus anatinus 76_5 - Platypus
NoYes	Saccoglossus kowalevskii v3.0
NoYes	Petromyzon marinus 76_7.0 - Sea lamprey
NoYes	Meleagris gallopavo 76_2 - Turkey
NoYes	Gallus gallus 76_4 - Chicken
NoYes	Anas platyrhynchos 76_1.0 - Mallard
NoYes	Taeniopygia guttata 76_3.2.4 - Zebra finch
NoYes	Ficedula albicollis 76_1.0 - Collared flycatcher
NoYes	Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtle
NoYes	Anolis carolinensis 76_2.0 - Green anole
NoYes	Xenopus tropicalis 76_4.2 - Tropical clawed frog
NoYes	Latimeria chalumnae 76_1 - Coelacanth
NoYes	Lepisosteus oculatus 76 - Spotted gar
NoYes	Gadus morhua 76_1 - Atlantic cod
NoYes	Tetraodon nigroviridis 76_8 - Spotted green pufferfish
NoYes	Takifugu rubripes 76_4 - Torafugu
NoYes	Gasterosteus aculeatus 76_1 - Three-spined stickleback
NoYes	Oryzias latipes 76_1 - Japanese medaka
NoYes	Xiphophorus maculatus 76_4.4.2 - Southern platyfish
NoYes	Poecilia formosa 76 - Amazon molly
NoYes	Oreochromis niloticus 76_1.0 - Nile tilapia
NoYes	Astyanax mexicanus 76 - Mexican tetra
NoYes	Danio rerio 76_9 - Zebrafish
NoYes	Oikopleura dioica
NoYes	Ciona intestinalis 76 - Vase tunicate
NoYes	Strongylocentrotus purpuratus v3.1 - Purple sea urchin
NoYes	Adineta vaga
NoYes	Octopus bimaculoides 280
NoYes	Crassostrea gigas 22 - Pacific oyster
NoYes	Lottia gigantea - Owl limpet
NoYes	Helobdella robusta
NoYes	Capitella sp. I
NoYes	Danaus plexippus OGS1.0 - Monarch butterfly
NoYes	Heliconius melpomene - Postman butterfly
NoYes	Bombyx mori - Domestic silkworm
NoYes	Nasonia vitripennis - Jewel wasp
NoYes	Apis mellifera 38.2d - Honey bee
NoYes	Harpegnathos saltator v3.3 - Jerdon's jumping ant
NoYes	Linepithema humile v1.1 - Argentine ant
NoYes	Pogonomyrmex barbatus v1.2 - Red harvester ant
NoYes	Solenopsis invicta v.2.2.3 - Red fire ant
NoYes	Acromyrmex echinatior v3.8 - Panamanian leafcutter ant
NoYes	Atta cephalotes v1.1
NoYes	Camponotus floridanus v3.3 - Florida carpenter ant
NoYes	Lucilia cuprina - Australian sheep blowfly
NoYes	Drosophila grimshawi 1.3
NoYes	Drosophila willistoni 1.3
NoYes	Drosophila pseudoobscura 2.13
NoYes	Drosophila persimilis 1.3
NoYes	Drosophila suzukii
NoYes	Drosophila yakuba 1.3
NoYes	Drosophila simulans 1.3
NoYes	Drosophila sechellia 1.3
NoYes	Drosophila melanogaster 76_5 - Fruit fly
NoYes	Drosophila erecta 1.3
NoYes	Drosophila ananassae 1.3
NoYes	Drosophila virilis 1.2
NoYes	Drosophila mojavensis 1.3
NoYes	Aedes aegypti 55 - Yellow fever mosquito
NoYes	Culex pipiens quinquefasciatus - Southern house mosquito
NoYes	Anopheles darlingi 22 - American malaria mosquito
NoYes	Anopheles gambiae 49_3j - African malaria mosquito
NoYes	Tribolium castaneum 3.0 - Red flour beetle
NoYes	Pediculus humanus corporis - Human body louse
NoYes	Acyrthosiphon pisum - Pea aphid
NoYes	Rhodnius prolixus 22
NoYes	Daphnia pulex - Common water flea
NoYes	Strigamia maritima 22
NoYes	Sarcoptes scabiei
NoYes	Tetranychus urticae - Two-spotted spider mite
NoYes	Ixodes scapularis - Black-legged tick
NoYes	Pristionchus pacificus
NoYes	Meloidogyne incognita - Southern root-knot nematode
NoYes	Meloidogyne hapla
NoYes	Onchocerca volvulus 22
NoYes	Brugia malayi WS250 - Agent of lymphatic filariasis
NoYes	Caenorhabditis japonica
NoYes	Caenorhabditis brenneri
NoYes	Caenorhabditis remanei
NoYes	Caenorhabditis elegans 76_235 - Roundworm
NoYes	Caenorhabditis briggsae 2
NoYes	Trichinella spiralis 22
NoYes	Hymenolepis microstoma
NoYes	Echinococcus multilocularis
NoYes	Echinococcus granulosus
NoYes	Taenia solium - Pork tapeworm
NoYes	Schistosoma mansoni
NoYes	Mnemiopsis leidyi - Sea walnut
NoYes	Thelohanellus kitauei
NoYes	Acropora digitifera v1.0
NoYes	Nematostella vectensis 1.0 - Starlet sea anemone
NoYes	Amphimedon queenslandica
NoYes	Trichoplax adhaerens
NoYes	Proterospongia sp. ATCC 50818
NoYes	Monosiga brevicollis
NoYes	Capsaspora owczarzaki ATCC 30864
NoYes	Dictyostelium discoideum
NoYes	Dictyostelium purpureum
NoYes	Entamoeba dispar 1.2
NoYes	Entamoeba invadens 1.2
NoYes	Entamoeba histolytica 1
NoYes	Coccomyxa subellipsoidea sp. C-169 v2
NoYes	Asterochloris sp. Cgr/DA1pho v1.0
NoYes	Chlorella variabilis sp. NC64A
NoYes	Chlorella vulgaris
NoYes	Volvox carteri f. nagariensis
NoYes	Volvox carteri v199
NoYes	Chlamydomonas reinhardtii 4.0
NoYes	Ostreococcus sp. RCC809
NoYes	Ostreococcus lucimarinus CCE9901
NoYes	Ostreococcus tauri
NoYes	Bathycoccus prasinos
NoYes	Micromonas sp. RCC299
NoYes	Micromonas pusilla CCMP1545 v3.0
NoYes	Cyanidioschyzon merolae strain 10D 22
NoYes	Cyanidioschyzon merolae
NoYes	Porphyridium purpureum 02_2012
NoYes	Bigelowiella natans CCMP2755 22
NoYes	Cyanophora paradoxa
NoYes	Aureococcus anophagefferens
NoYes	Thalassiosira pseudonana CCMP1335
NoYes	Perkinsus marinus ATCC 50983
NoYes	Neospora caninum
NoYes	Toxoplasma gondii ME49
NoYes	Toxoplasma gondii GT1
NoYes	Babesia bovis T2Bo
NoYes	Theileria parva
NoYes	Theileria annulata
NoYes	Plasmodium falciparum 3D7
NoYes	Plasmodium vivax SaI-1 7.0
NoYes	Plasmodium knowlesi strain H
NoYes	Plasmodium yoelii ssp. yoelii 1
NoYes	Plasmodium chabaudi
NoYes	Plasmodium berghei ANKA
NoYes	Symbiodinium minutum clade B1 v1.2
NoYes	Trichomonas vaginalis
NoYes	Guillardia theta CCMP2712 v1.0
NoYes	Emiliania huxleyi CCMP1516
NoYes	Thermobaculum terrenum ATCC BAA-798
NoYes	Gloeocapsa sp. PCC 7428
NoYes	Halothece sp. PCC 7418
NoYes	Rubrobacter xylanophilus DSM 9941
NoYes	Thermobispora bispora DSM 43833
NoYes	Thermomonospora curvata DSM 43183
NoYes	Streptomyces bingchenggensis BCW-1
NoYes	Streptomyces cattleya NRRL 8057 = DSM 46488
NoYes	Salinispora arenicola CNS-205
NoYes	Salinispora tropica CNB-440
NoYes	Verrucosispora maris AB-18-032
NoYes	Mycobacterium canettii CIPT 140010059
NoYes	Mycobacterium africanum GM041182
NoYes	Mycobacterium tuberculosis KZN 1435
NoYes	Mycobacterium tuberculosis
NoYes	Mycobacterium bovis BCG str. Pasteur 1173P2
NoYes	Caldilinea aerophila DSM 14535 = NBRC 104270
NoYes	Dehalococcoides ethenogenes 195
NoYes	Dehalococcoides sp. BAV1
NoYes	Anaerolinea thermophila UNI-1
NoYes	Thermomicrobium roseum DSM 5159
NoYes	Oceanithermus profundus DSM 14977
NoYes	Marinithermus hydrothermalis DSM 14884
NoYes	Thermus sp. CCB_US3_UF1
NoYes	Thermus scotoductus SA-01
NoYes	Thermus thermophilus HB27
NoYes	Thermaerobacter marianensis DSM 12885
NoYes	Coprothermobacter proteolyticus DSM 5265
NoYes	Melioribacter roseus P3M
NoYes	Ignavibacterium album JCM 16511
NoYes	Chlorobaculum parvum NCIB 8327
NoYes	Chlorobium tepidum TLS
NoYes	Rhodothermus marinus DSM 4252
NoYes	Waddlia chondrophila WSU 86-1044
NoYes	Simkania negevensis Z
NoYes	Isosphaera pallida ATCC 43644
NoYes	Methylacidiphilum infernorum V4
NoYes	Aminobacterium colombiense DSM 12261
NoYes	Anaerobaculum mobile DSM 13181
NoYes	Thermodesulfatator indicus DSM 15286
NoYes	Thermodesulfobacterium sp. OPB45
NoYes	Deferribacter desulfuricans SSM1
NoYes	Flexistipes sinusarabici DSM 4947
NoYes	Marinitoga piezophila KA3
NoYes	Fervidobacterium pennivorans DSM 9078
NoYes	Fervidobacterium nodosum Rt17-B1
NoYes	Thermosipho melanesiensis BI429
NoYes	Thermosipho africanus TCF52B
NoYes	Thermotoga lettingae TMO
NoYes	Thermotoga thermarum DSM 5069
NoYes	Thermotoga sp. RQ2
NoYes	Thermotoga naphthophila RKU-10
NoYes	Thermotoga petrophila RKU-1
NoYes	Thermotoga neapolitana DSM 4359
NoYes	Thermotoga maritima MSB8
NoYes	Thermocrinis albus DSM 14484
NoYes	Aquifex aeolicus VF5
NoYes	Hydrogenobacter thermophilus TK-6
NoYes	Dictyoglomus turgidum DSM 6724
NoYes	Dictyoglomus thermophilum H-6-12
NoYes	Thermodesulfovibrio yellowstonii DSM 11347
NoYes	Candidatus Nitrospira defluvii
NoYes	Candidatus Methylomirabilis oxyfera
NoYes	Desulfobacca acetoxidans DSM 11109
NoYes	Syntrophus aciditrophicus SB
NoYes	Desulfomonile tiedjei DSM 6799
NoYes	Syntrophobacter fumaroxidans MPOB
NoYes	Desulfatibacillum alkenivorans AK-01
NoYes	Desulfococcus oleovorans Hxd3
NoYes	Desulfohalobium retbaense DSM 5692
NoYes	Geobacter daltonii FRC-32
NoYes	Geobacter sp. M21
NoYes	Geobacter uraniireducens Rf4
NoYes	Geobacter bemidjiensis Bem
NoYes	Geobacter sulfurreducens KN400
NoYes	Geobacter metallireducens GS-15
NoYes	Pelobacter propionicus DSM 2379
NoYes	Pelobacter carbinolicus DSM 2380
NoYes	Babela massiliensis
NoYes	Anaeromyxobacter sp. Fw109-5
NoYes	Anaeromyxobacter dehalogenans 2CP-1
NoYes	Corallococcus coralloides DSM 2259
NoYes	Myxococcus xanthus DK 1622
NoYes	Myxococcus fulvus HW-1
NoYes	Azoarcus sp. KH32C
NoYes	Pseudogulbenkiania sp. NH8B
NoYes	Burkholderia thailandensis E264
NoYes	Rhodoferax ferrireducens T118
NoYes	Thiobacillus denitrificans ATCC 25259
NoYes	Nitrosospira multiformis ATCC 25196
NoYes	Nitrosomonas sp. Is79A3
NoYes	Methylomicrobium alcaliphilum
NoYes	Methylococcus capsulatus str. Bath
NoYes	Alkalilimnicola ehrlichii MLHE-1
NoYes	Thioalkalivibrio sulfidophilus HL-EbGr7
NoYes	Nitrosococcus halophilus Nc4
NoYes	Coxiella burnetii Dugway 5J108-111
NoYes	Legionella longbeachae NSW150
NoYes	Legionella pneumophila str. Corby
NoYes	Azotobacter vinelandii DJ
NoYes	Nanoarchaeum equitans Kin4-M
NoYes	Candidatus Caldiarchaeum subterraneum
NoYes	Cenarchaeum symbiosum A
NoYes	Candidatus Nitrosopumilus sp. AR2
NoYes	Nitrosopumilus maritimus SCM1
NoYes	Candidatus Korarchaeum cryptofilum OPF8
NoYes	Acidilobus saccharovorans 345-15
NoYes	Fervidicoccus fontis Kam940
NoYes	Pyrolobus fumarii 1A
NoYes	Hyperthermus butylicus DSM 5456
NoYes	Thermogladius cellulolyticus 1633
NoYes	Ignisphaera aggregans DSM 17230
NoYes	Aeropyrum pernix K1
NoYes	Ignicoccus hospitalis KIN4/I
NoYes	Thermosphaera aggregans DSM 11486
NoYes	Staphylothermus hellenicus DSM 12710
NoYes	Staphylothermus marinus F1
NoYes	Desulfurococcus fermentans DSM 16532
NoYes	Desulfurococcus kamchatkensis 1221n
NoYes	Desulfurococcus mucosus DSM 2162
NoYes	Metallosphaera cuprina Ar-4
NoYes	Metallosphaera sedula DSM 5348
NoYes	Acidianus hospitalis W1
NoYes	Sulfolobus tokodaii str. 7
NoYes	Sulfolobus islandicus Y.N.15.51
NoYes	Sulfolobus solfataricus P2
NoYes	Sulfolobus acidocaldarius DSM 639
NoYes	Thermofilum sp. 1910b
NoYes	Thermofilum pendens Hrk 5
NoYes	Vulcanisaeta moutnovskia 768-28
NoYes	Vulcanisaeta distributa DSM 14429
NoYes	Caldivirga maquilingensis IC-167
NoYes	Pyrobaculum sp. 1860
NoYes	Pyrobaculum calidifontis JCM 11548
NoYes	Pyrobaculum arsenaticum DSM 13514
NoYes	Pyrobaculum oguniense TE7
NoYes	Thermoproteus neutrophilus V24Sta
NoYes	Pyrobaculum aerophilum str. IM2
NoYes	Pyrobaculum islandicum DSM 4184
NoYes	Thermoproteus uzoniensis 768-20
NoYes	Thermoproteus tenax Kra 1
NoYes	halophilic archaeon DL31
NoYes	Methanocella arvoryzae MRE50
NoYes	Methanocella conradii HZ254
NoYes	Methanocella paludicola SANAE
NoYes	Methanosaeta harundinacea 6Ac
NoYes	Methanosaeta thermophila PT
NoYes	Methanosaeta concilii GP6
NoYes	Methanosalsum zhilinae DSM 4017
NoYes	Methanohalobium evestigatum Z-7303
NoYes	Methanococcoides burtonii DSM 6242
NoYes	Methanosarcina acetivorans C2A
NoYes	Methanosarcina mazei Go1
NoYes	Methanosarcina barkeri str. Fusaro
NoYes	Methanohalophilus mahii DSM 5219
NoYes	Methanosphaerula palustris E1-9c
NoYes	Methanoregula boonei 6A8
NoYes	Methanospirillum hungatei JF-1
NoYes	Methanocorpusculum labreanum Z
NoYes	Methanoplanus petrolearius DSM 11571
NoYes	Methanoculleus bourgensis MS2
NoYes	Methanoculleus marisnigri JR1
NoYes	Methanopyrus kandleri AV19
NoYes	Ferroglobus placidus DSM 10642
NoYes	Archaeoglobus profundus DSM 5631
NoYes	Archaeoglobus veneficus SNP6
NoYes	Archaeoglobus fulgidus DSM 4304
NoYes	Thermococcus sp. 4557
NoYes	Thermococcus onnurineus NA1
NoYes	Thermococcus kodakarensis KOD1
NoYes	Thermococcus gammatolerans EJ3
NoYes	Thermococcus sibiricus MM 739
NoYes	Thermococcus barophilus MP
NoYes	Pyrococcus sp. ST04
NoYes	Pyrococcus yayanosii CH1
NoYes	Pyrococcus horikoshii OT3
NoYes	Pyrococcus abyssi GE5
NoYes	Pyrococcus furiosus COM1
NoYes	Thermoplasmatales archaeon BRNA1
NoYes	Thermoplasma volcanium GSS1
NoYes	Thermoplasma acidophilum DSM 1728
NoYes	Picrophilus torridus DSM 9790
NoYes	Salinarchaeum sp. Harcht-Bsk1
NoYes	Halopiger xanaduensis SH-6
NoYes	Methanobacterium sp. AL-21
NoYes	Haloterrigena turkmenica DSM 5511
NoYes	Natrinema sp. J7-2
NoYes	Natrialba magadii ATCC 43099
NoYes	Halorubrum lacusprofundi ATCC 49239
NoYes	Halogeometricum borinquense DSM 11551
NoYes	Haloferax mediterranei ATCC 33500
NoYes	Haloferax volcanii DS2
NoYes	Halorhabdus utahensis DSM 12940
NoYes	Natronomonas pharaonis DSM 2160
NoYes	Halalkalicoccus jeotgali B3
NoYes	Halobacterium salinarum R1
NoYes	Halobacterium sp. NRC-1
NoYes	Methanotorris igneus Kol 5
NoYes	Methanocaldococcus sp. FS406-22
NoYes	Methanocaldococcus fervens AG86
NoYes	Methanocaldococcus vulcanius M7
NoYes	methanocaldococcus infernus ME
NoYes	Methanocaldococcus jannaschii DSM 2661
NoYes	Methanothermococcus okinawensis IH1
NoYes	Methanococcus aeolicus Nankai-3
NoYes	Methanococcus maripaludis C5
NoYes	Methanococcus voltae A3
NoYes	Methanococcus vannielii SB
NoYes	Methanothermus fervidus DSM 2088
NoYes	Methanothermobacter marburgensis str. Marburg
NoYes	Methanothermobacter thermautotrophicus str. Delta H
NoYes	Methanosphaera stadtmanae DSM 3091
NoYes	Methanobrevibacter sp. AbM4
NoYes	Methanobrevibacter ruminantium M1
NoYes	Methanobrevibacter smithii ATCC 35061
NoYes	Complete genome sequence of Methanobacterium sp. Mb1
NoYes	Aciduliprofundum sp. MAR08-339
NoYes	Aciduliprofundum boonei T469
NoYes	Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frog
NoYes	Drosophila melanogaster FlyBase 5.12 - Fruit fly
NoYes	Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquito
NoYes	Ascaris suum Victoria/Ghent - Pig roundworm
NoYes	Caenorhabditis elegans WormBase WS218 - Roundworm
NoYes	Neospora caninum Nc-Liverpool 6.2
NoYes	Plasmodium falciparum HB3
NoYes	Plasmodium falciparum Dd2
NoYes	Synechococcus sp. JA-3-3Ab
NoYes	Oscillatoria acuminata PCC 6304
NoYes	Cyanothece sp. PCC 7822
NoYes	Cyanothece sp. PCC 7424
NoYes	Pleurocapsa minor Pleurocapsa sp. PCC 7327
NoYes	Streptomyces cattleya NRRL 8057 = DSM 46488
NoYes	Mycobacterium canettii CIPT 140070017
NoYes	Mycobacterium canettii CIPT 140060008
NoYes	Mycobacterium canettii CIPT 140070008
NoYes	Mycobacterium canettii CIPT 140070010
NoYes	Mycobacterium tuberculosis EAI5/NITR206
NoYes	Mycobacterium tuberculosis EAI5
NoYes	Mycobacterium tuberculosis CAS/NITR204
NoYes	Mycobacterium tuberculosis str. Beijing/NITR203
NoYes	Mycobacterium tuberculosis UT205
NoYes	Mycobacterium tuberculosis RGTB423
NoYes	Mycobacterium tuberculosis RGTB327
NoYes	Mycobacterium tuberculosis CTRI-2
NoYes	Mycobacterium tuberculosis str. Erdman = ATCC 35801
NoYes	Mycobacterium tuberculosis KZN 605
NoYes	Mycobacterium tuberculosis KZN 4207
NoYes	Mycobacterium tuberculosis CCDC5180
NoYes	Mycobacterium tuberculosis CCDC5079
NoYes	Mycobacterium tuberculosis CCDC5079
NoYes	Mycobacterium tuberculosis H37Ra
NoYes	Mycobacterium tuberculosis str. Haarlem/NITR202
NoYes	Mycobacterium tuberculosis str. Haarlem
NoYes	Mycobacterium tuberculosis F11
NoYes	Mycobacterium tuberculosis H37Rv
NoYes	Mycobacterium tuberculosis CDC1551
NoYes	Mycobacterium bovis AF2122/97
NoYes	Mycobacterium bovis BCG str. Korea 1168P
NoYes	Mycobacterium bovis BCG str. Mexico
NoYes	Mycobacterium bovis BCG str. Tokyo 172
NoYes	Mycobacterium kansasii ATCC 12478
NoYes	Dehalococcoides mccartyi GY50
NoYes	Dehalococcoides mccartyi DCMB5
NoYes	Dehalococcoides mccartyi BTF08
NoYes	Dehalococcoides sp. GT
NoYes	Dehalococcoides sp. VS
NoYes	Dehalococcoides sp. CBDB1
NoYes	Thermus oshimai JL-2
NoYes	Thermus thermophilus JL-18
NoYes	Thermus thermophilus SG0.5JP17-16
NoYes	Thermus thermophilus HB8
NoYes	Rhodothermus marinus SG0.5JP17-172
NoYes	Singulisphaera acidiphila DSM 18658
NoYes	Thermotoga maritima MSB8
NoYes	Hydrogenobacter thermophilus TK-6
NoYes	Desulfobacula toluolica Tol2
NoYes	Geobacter sp. M18
NoYes	Geobacter sulfurreducens PCA
NoYes	Anaeromyxobacter sp. K
NoYes	Anaeromyxobacter dehalogenans 2CP-C
NoYes	Thioalkalivibrio nitratireducens DSM 14787
NoYes	Coxiella burnetii CbuK_Q154
NoYes	Legionella pneumophila str. Paris
NoYes	Legionella pneumophila str. Lens
NoYes	Legionella pneumophila subsp. pneumophila LPE509
NoYes	Legionella pneumophila subsp. pneumophila str. Thunder Bay
NoYes	Legionella pneumophila subsp. pneumophila str. Philadelphia 1
NoYes	Legionella pneumophila subsp. pneumophila
NoYes	Legionella pneumophila subsp. pneumophila
NoYes	Legionella pneumophila subsp. pneumophila ATCC 43290
NoYes	Legionella pneumophila 2300/99 Alcoy
NoYes	Azotobacter vinelandii CA6
NoYes	Azotobacter vinelandii CA
NoYes	Candidatus Nitrososphaera gargensis Ga9.2
NoYes	Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1
NoYes	Caldisphaera lagunensis DSM 15908
NoYes	Aeropyrum camini SY1 = JCM 12091
NoYes	Sulfolobus islandicus LAL14/1
NoYes	Sulfolobus islandicus REY15A
NoYes	Sulfolobus islandicus HVE10/4
NoYes	Sulfolobus islandicus Y.G.57.14
NoYes	Sulfolobus islandicus L.S.2.15
NoYes	Sulfolobus islandicus M.16.27
NoYes	Sulfolobus islandicus M.14.25
NoYes	Sulfolobus islandicus M.16.4
NoYes	Sulfolobus islandicus L.D.8.5
NoYes	Sulfolobus solfataricus 98/2
NoYes	Sulfolobus acidocaldarius SUSAZ
NoYes	Sulfolobus acidocaldarius Ron12/I
NoYes	Sulfolobus acidocaldarius N8
NoYes	Methanomethylovorans hollandica DSM 15978
NoYes	Methanolobus psychrophilus R15
NoYes	Methanosarcina mazei Tuc01
NoYes	Methanoregula formicica Methanoregula formicicum SMSP
NoYes	Archaeoglobus sulfaticallidus PM70-1
NoYes	Thermococcus sp. AM4
NoYes	Thermococcus sp. CL1
NoYes	Thermococcus litoralis DSM 5473
NoYes	Pyrococcus sp. NA2
NoYes	Pyrococcus furiosus DSM 3638
NoYes	Candidatus Methanomethylophilus alvus Mx1201
NoYes	Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
NoYes	Ferroplasma acidarmanus fer1
NoYes	Halovivax ruber XH-70
NoYes	Natrinema pellirubrum DSM 15624
NoYes	Natronococcus occultus SP4
NoYes	Natronobacterium gregoryi SP2
NoYes	Halorhabdus tiamatea SARL4B
NoYes	Natronomonas moolapensis 8.8.11
NoYes	Methanococcus maripaludis X1
NoYes	Methanococcus maripaludis C6
NoYes	Methanococcus maripaludis C7
NoYes	Methanococcus maripaludis S2
NoYes	Methanobacterium sp. SWAN-1
NoYes	Homo sapiens 69_37 - Human
NoYes	Gorilla gorilla 69_3.1 - Western gorilla
NoYes	Pongo abelii 69_2 - Sumatran orangutan
NoYes	Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbon
NoYes	Macaca mulatta 69_1 - Rhesus monkey
NoYes	Otolemur garnettii 69_3 - Small-eared galago
NoYes	Tarsius syrichta 69_1
NoYes	Microcebus murinus 69_1 - Gray mouse lemur
NoYes	Rattus norvegicus 69_3.4 - Norway rat
NoYes	Mus musculus 69_38 - House mouse
NoYes	Dipodomys ordii 69_1 - Ord's kangaroo rat
NoYes	Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrel
NoYes	Cavia porcellus 69_3 - Domestic guinea pig
NoYes	Oryctolagus cuniculus 69_2 - Rabbit
NoYes	Ochotona princeps 69 - American pika
NoYes	Sus scrofa 69_10.2 - Pig
NoYes	Bos taurus 69_3.1 - Cattle
NoYes	Vicugna pacos 69_1 - Alpaca
NoYes	Tursiops truncatus 69_1 - Bottlenose dolphin
NoYes	Mustela putorius furo 69_1.0 - Domestic ferret
NoYes	Ailuropoda melanoleuca 69_1 - Giant panda
NoYes	Canis familiaris 69_3.1 - Dog
NoYes	Felis catus 69 - Domestic cat
NoYes	Equus caballus 69_2 - Horse
NoYes	Myotis lucifugus 69_2.0 - Little brown bat
NoYes	Pteropus vampyrus 69_1 - Large flying fox
NoYes	Sorex araneus 69_1 - European shrew
NoYes	Erinaceus europaeus 69 - Western European hedgehog
NoYes	Procavia capensis 69_1 - Cape rock hyrax
NoYes	Echinops telfairi 69 - Small Madagascar hedgehog
NoYes	Dasypus novemcinctus 69_2 - Nine-banded armadillo
NoYes	Choloepus hoffmanni 69_1 - Hoffmann's two-fingered sloth
NoYes	Macropus eugenii 69_1.0 - Tammar wallaby
NoYes	Sarcophilus harrisii 69_7.0 - Tasmanian devil
NoYes	Monodelphis domestica 69_5 - Gray short-tailed opossum
NoYes	Ornithorhynchus anatinus 69_5 - Platypus
NoYes	Petromyzon marinus 69_7.0 - Sea lamprey
NoYes	Meleagris gallopavo 69_2 - Turkey
NoYes	Gallus gallus 69_2 - Chicken
NoYes	Taeniopygia guttata 69_3.2.4 - Zebra finch
NoYes	Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtle
NoYes	Anolis carolinensis 69_2.0 - Green anole
NoYes	Xenopus tropicalis 69_4.2 - Tropical clawed frog
NoYes	Latimeria chalumnae 69_1 - Coelacanth
NoYes	Gadus morhua 69_1 - Atlantic cod
NoYes	Tetraodon nigroviridis 69_8 - Spotted green pufferfish
NoYes	Takifugu rubripes 69_4 - Torafugu
NoYes	Gasterosteus aculeatus 69_1 - Three-spined stickleback
NoYes	Oryzias latipes 69_1 - Japanese medaka
NoYes	Xiphophorus maculatus 69_4.4.2 - Southern platyfish
NoYes	Oreochromis niloticus 69_1.0 - Nile tilapia
NoYes	Danio rerio 69_9 - Zebrafish
NoYes	Ciona intestinalis 69 - Vase tunicate
NoYes	Drosophila melanogaster 69_5 - Fruit fly
NoYes	Caenorhabditis elegans 69_215 - Roundworm
NoYes	Homo sapiens 75_37 - Human
NoYes	Homo sapiens - Human
NoYes	Mus musculus 63_37 (longest transcript per gene) - House mouse
NoYes	Heliconius numata
NoYes	Loa loa v3.3 - Eye worm
NoYes	Wuchereria bancrofti v1.0 - Agent of lymphatic filariasis
NoYes	Brugia malayi v1.0 - Agent of lymphatic filariasis
NoYes	Encephalitozoon intestinalis
NoYes	Encephalitozoon cuniculi
NoYes	Mycobacterium tuberculosis H37Rv
NoYes	1_050719N (meta-genome)
NoYes	2_050719S (meta-genome)
NoYes	3_050719R (meta-genome)
NoYes	4_050719Q (meta-genome)
NoYes	4_Deep_abyss (meta-genome)
NoYes	5_050719P (meta-genome)
NoYes	5_Below_upper_mesopelagic (meta-genome)
NoYes	7_Oxygen_minimum_layer (meta-genome)
NoYes	Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)
NoYes	Bath Hot Springs, filamentous community (meta-genome)
NoYes	Bath Hot Springs, planktonic community (meta-genome)
NoYes	Dump bottom (Dump bottom) (meta-genome)
NoYes	Endophytic microbiome from Rice (meta-genome)
NoYes	Freshwater propionate enrichment of Brocadia fulgida (meta-genome)
NoYes	Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes
NoYes	Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)
NoYes	Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)
NoYes	Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)
NoYes	Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)
NoYes	Human Gut Community Subject 7 (meta-genome)
NoYes	Human Gut Community Subject 8 (meta-genome)
NoYes	Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)
NoYes	Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)
NoYes	Marine anammox bioreactor enriched for Scalindua species (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)
NoYes	Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)
NoYes	Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)
NoYes	NCBI 2017_08 genome
NoYes	Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)
NoYes	Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)
NoYes	Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)
NoYes	Protozoadb 2010_08 (Protozoadb)
NoYes	simHC - Simulated High Complexity Metagenome (meta-genome)
NoYes	simLC - Simulated Low Complexity Metagenome (meta-genome)
NoYes	simMC - Simulated Medium Complexity Metagenome (meta-genome)
NoYes	Soil microbial communities from Minnesota Farm (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)
NoYes	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)
NoYes	Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)
NoYes	STRING v9.0.5 (STRING)
NoYes	Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)
NoYes	Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)
NoYes	Uniprot 2018_03 genome
NoYes	Uranium Contaminated Groundwater FW106 (meta-genome)
NoYes	Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)
NoYes	Global Ocean Sampling Expedition (GOS)
NoYes	NCBI plasmid sequences (Plasmids)
NoYes	PDB chains (SCOP 1.75) (PDB)
NoYes	Protein Data Bank (all PDB sequenc)
NoYes	SCOP2 SCOPe CATH ECOD (all domain sequ)
NoYes	TargetDB (Targets)
NoYes	UniProt viral sequences (Viral)
NoYes	ALL (only advised for small superfamilies)

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MTH1598-like alignments