SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 100910 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

100910 - Chemosensory protein Csp2

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Mus_musculus_76_38   (House mouse)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Oikopleura_dioica 0
Ciona_intestinalis_76   (Vase tunicate)   0
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Danaus_plexippus_OGS1.0   (Monarch butterfly)   20
Heliconius_melpomene_   (Postman butterfly)   34
Bombyx_mori_   (Domestic silkworm)   17
Nasonia_vitripennis_   (Jewel wasp)   9
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   13
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   12
Linepithema_humile_v1.1   (Argentine ant)   10
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   11
Solenopsis_invicta_v.2.2.3   (Red fire ant)   15
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   13
Atta_cephalotes_v1.1 14
Camponotus_floridanus_v3.3   (Florida carpenter ant)   10
Lucilia_cuprina   (Australian sheep blowfly)   3
Drosophila_grimshawi_1.3 4
Drosophila_willistoni_1.3 3
Drosophila_pseudoobscura_2.13 4
Drosophila_persimilis_1.3 5
Drosophila_suzukii 3
Drosophila_yakuba_1.3 3
Drosophila_simulans_1.3 3
Drosophila_sechellia_1.3 3
Drosophila_melanogaster_76_5   (Fruit fly)   3
Drosophila_erecta_1.3 3
Drosophila_ananassae_1.3 3
Drosophila_virilis_1.2 4
Drosophila_mojavensis_1.3 3
Megaselia_scalaris_22 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   39
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   26
Anopheles_darlingi_22   (American malaria mosquito)   3
Anopheles_gambiae_49_3j   (African malaria mosquito)   7
Tribolium_castaneum_3.0   (Red flour beetle)   18
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   7
Acyrthosiphon_pisum_   (Pea aphid)   5
Rhodnius_prolixus_22 18
Daphnia_pulex_   (Common water flea)   3
Strigamia_maritima_22 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Pristionchus_pacificus_ 0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 0
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 0
Piloderma_croceum_F_1598_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 0
Pisolithus_tinctorius_Marx_270_v1.0 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Galerina_marginata_v1.0 0
Hebeloma_cylindrosporum_h7_v2.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Dichomitus_squalens 0
Trametes_versicolor_v1.0 0
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_poae_ATCC_64411_22 0
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 0
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 0
Fusarium_graminearum_ 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 0
Fusarium_verticillioides_7600_ 0
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Blumeria_graminis_22 0
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 0
Stagonospora_nodorum_ 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Mycosphaerella_fijiensis_CIRAD86_ 0
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 0
Ajellomyces_dermatitidis_SLH14081_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_verrucosum_HKI_0517_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Trichophyton_rubrum_CBS_118892_ 0
Uncinocarpus_reesii_1704_ 0
Aspergillus_zonatus_v1.0 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Penicillium_chrysogenum_v1.0 0
Aspergillus_acidus_v1.0 0
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 0
Aspergillus_carbonarius_ITEM_5010_ 0
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 0
Aspergillus_wentii_v1.0 0
Aspergillus_niger_22 0
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 0
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Wickerhamomyces_anomalus 0
Vanderwaltozyma_polyspora_DSM_70294_ 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Catenaria_anguillulae_PL171_v1.0 0
Entamoeba_dispar_1.2 0
Entamoeba_histolytica_1 0
Pinus_taeda   (Loblolly pine)   0
Gossypium_raimondii_v221 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Carica_papaya_   (Papaya)   0
Medicago_truncatula_   (Barrel medic)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   0
Panicum_virgatum_v202   (Switchgrass)   0
Setaria_italica_v164   (Foxtail millet)   0
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Physcomitrella_patens 0
Micromonas_pusilla_CCMP1545_v3.0 0
Porphyridium_purpureum_02_2012 0
Bigelowiella_natans_CCMP2755_22 0
Leishmania_mexicana_2.4 0
Trypanosoma_cruzi_strain_CL_Brener 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_infestans_T30-4_ 0
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Trichomonas_vaginalis_ 0
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 0
Microcoleus_sp._PCC_7113 0
Rivularia_sp._PCC_7116 0
Rhodococcus_jostii_RHA1 0
Desulfitobacterium_hafniense_Y51 0
Desulfitobacterium_dehalogenans_ATCC_51507 0
Clostridium_sticklandii_DSM_519 0
Eubacterium_rectale_M104/1 0
Eubacterium_rectale_ATCC_33656 0
Alkaliphilus_oremlandii_OhILAs 0
Clostridium_sp._BNL1100 0
Clostridium_kluyveri_DSM_555 0
Halanaerobium_praevalens_DSM_2228 0
Bacillus_anthracis_str._A0248 0
Bacillus_pseudofirmus_OF4 0
Bacillus_coagulans_2-6 0
Haliscomenobacter_hydrossis_DSM_1100 0
Owenweeksia_hongkongensis_DSM_17368 0
Capnocytophaga_ochracea_DSM_7271 0
Brachyspira_pilosicoli_95/1000 0
Brachyspira_hyodysenteriae_WA1 0
Thermotoga_neapolitana_DSM_4359 0
Granulicella_tundricola_MP5ACTX9 0
Terriglobus_saanensis_SP1PR4 0
Ilyobacter_polytropus_DSM_2926 0
Acidithiobacillus_ferrivorans_SS3 0
Desulfomonile_tiedjei_DSM_6799 0
Desulfovibrio_piezophilus 0
Desulfovibrio_magneticus_RS-1 0
Advenella_kashmirensis_WT001 0
Rickettsia_philipii_str._364D 0
Azorhizobium_caulinodans_ORS_571 0
Oligotropha_carboxidovorans_OM4 0
Rhodopseudomonas_palustris_BisA53 0
Nitrobacter_winogradskyi_Nb-255 0
Nitrobacter_hamburgensis_X14 0
Bradyrhizobium_japonicum_USDA_110 0
Bradyrhizobium_sp._ORS_278 0
Pantoea_vagans_C9-1 0
Shigella_flexneri_5_str._8401 0
Shigella_boydii_CDC_3083-94 0
Candidatus_Nitrosopumilus_sp._AR2 0
Candidatus_Korarchaeum_cryptofilum_OPF8 0
Natronomonas_pharaonis_DSM_2160 0
Acholeplasma_laidlawii_PG-8A 0

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Strains
Genome     Number
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   3
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   10
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_3703_ 0
Coccidioides_immitis_RMSCC_2394_ 0
Coccidioides_immitis_H538.4_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 0
Saccharomyces_cerevisiae_UC5 0
Saccharomyces_cerevisiae_PW5 0
Saccharomyces_cerevisiae_FL100 0
Saccharomyces_cerevisiae_CBS7960 0
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_FostersB 0
Saccharomyces_cerevisiae_FostersO 0
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_Vin13 0
Saccharomyces_cerevisiae_LalvinQA23 0
Saccharomyces_cerevisiae_AWRI796 0
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_YPS163 0
Saccharomyces_cerevisiae_T73 0
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Oscillatoria_acuminata_PCC_6304 0
Cyanothece_sp._PCC_7425 0
Cyanobacterium_aponinum_PCC_10605 0
Ruminococcus_champanellensis_18P13 0
Desulfitobacterium_dichloroeliminans_LMG_P-21439 0
Desulfitobacterium_hafniense_DCB-2 0
Desulfotomaculum_gibsoniae_DSM_7213 0
Clostridium_kluyveri_NBRC_12016 0
Bacillus_subtilis_subsp._spizizenii_str._W23 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_Bt407 0
Bacillus_cereus_AH820 0
Bacillus_cereus_B4264 0
Bacillus_cereus_G9842 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_10987 0
Bacillus_anthracis_str._H9401 0
Bacillus_anthracis_str._CDC_684 0
Bacillus_anthracis_str._'Ames_Ancestor' 0
Bacillus_anthracis_str._Sterne 0
Bacillus_anthracis_str._Ames 0
Singulisphaera_acidiphila_DSM_18658 0
Brachyspira_pilosicoli_WesB 0
Brachyspira_pilosicoli_B2904 0
Brachyspira_pilosicoli_P43/6/78 0
Desulfocapsa_sulfexigens_DSM_10523 0
Rickettsia_rickettsii_str._Brazil 0
Sinorhizobium_meliloti_GR4 0
Oligotropha_carboxidovorans_OM5 0
Oligotropha_carboxidovorans_OM5 0
Rhodopseudomonas_palustris_BisB18 0
Bradyrhizobium_sp._S23321 0
Bradyrhizobium_sp._BTAi1 0
Bradyrhizobium_oligotrophicum_S58 0
Bradyrhizobium_japonicum_USDA_6 0
Shigella_sonnei_53G 0
Shigella_flexneri_2002017 0
Shigella_flexneri_2a_str._301 0
Shigella_boydii_Sb227 0
Escherichia_coli_O104:H4_str._2009EL-2050 0
Escherichia_coli_O104:H4_str._2009EL-2071 0
Escherichia_coli_O104:H4_str._2011C-3493 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_O103:H2_str._12009 0
Escherichia_coli_O111:H-_str._11128 0
Escherichia_coli_O157:H7_str._Sakai 0
Acinetobacter_baumannii_SDF 0
Cycloclasticus_zancles_7-ME 0
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 0

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Longest transcript per gene
Genome     Number
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Ciona_intestinalis_69   (Vase tunicate)   0
Drosophila_melanogaster_69_5   (Fruit fly)   3
Caenorhabditis_elegans_69_215   (Roundworm)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Heliconius_numata__(Incomplete) 27
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   0
Moniliophthora_perniciosa_FA553__(Genome_survey) 0
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Acholeplasma_laidlawii_PG-8A_(duplicate) 0
NCBI_plasmid_sequences_(Plasmids) 0
STRING_v9.0.5_(STRING) 136
NCBI_2017_08_genome 1125
UniProt__viral_sequences_(Viral) 0
PDB_chains_(SCOP_1.75)_(PDB) 1
Uniprot_2018_03_genome 2092
TargetDB__(Targets) 1
Protozoadb_2010_08_(Protozoadb) 0
NCBI_viral_sequences_(Viral) 0
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 26
Protein_Data_Bank_(all_PDB_sequenc) 9

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