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  Home > SCOP hierarchy > Domain combination - 101898,63829

Domain combinations for 101898,63829 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

101898 - NHL repeat
63829 - Calcium-dependent phosphotriesterase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Mus_musculus_76_38   (House mouse)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Ochotona_princeps_76   (American pika)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Gallus_gallus_76_4   (Chicken)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Lepisosteus_oculatus_76   (Spotted gar)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Danio_rerio_76_9   (Zebrafish)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Adineta_vaga 8
Octopus_bimaculoides_280 0
Crassostrea_gigas_22   (Pacific oyster)   0
Bombyx_mori_   (Domestic silkworm)   0
Caenorhabditis_brenneri_ 0
Proterospongia_sp._ATCC_50818_ 0
Oryza_meridionalis_22 1
Oryza_punctata_22 0
Oryza_nivara_22 0
Ectocarpus_siliculosus 0
Naegleria_gruberi_ 0
Nakamurella_multipartita_DSM_44233 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Amycolatopsis_mediterranei_U32 0
Microlunatus_phosphovorus_NM-1 1
Mycobacterium_vanbaalenii_PYR-1 1
Mycobacterium_chubuense_NBB4 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 0
Roseiflexus_sp._RS-1 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aurantiacus_J-10-fl 0
Clostridium_clariflavum_DSM_19732 0
Bacillus_weihenstephanensis_KBAB4 1
Gemmatimonas_aurantiaca_T-27 0
Ignavibacterium_album_JCM_16511 0
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 0
Rhodothermus_marinus_DSM_4252 0
Flexibacter_litoralis_DSM_6794 0
Spirosoma_linguale_DSM_74 0
Parabacteroides_distasonis_ATCC_8503 0
Odoribacter_splanchnicus_DSM_20712 0
Prevotella_denticola_F0289 0
Prevotella_ruminicola_23 0
Alistipes_finegoldii_DSM_17242 0
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_helcogenes_P_36-108 0
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Pedobacter_saltans_DSM_12145 0
Pedobacter_heparinus_DSM_2366 0
Owenweeksia_hongkongensis_DSM_17368 0
Zunongwangia_profunda_SM-A87 0
Krokinobacter_sp._4H-3-7-5 0
Gramella_forsetii_KT0803 0
Aequorivita_sublithincola_DSM_14238 0
Flavobacterium_johnsoniae_UW101 0
Pirellula_staleyi_DSM_6068 0
Opitutus_terrae_PB90-1 0
Spirochaeta_africana_DSM_8902 0
Thermosipho_melanesiensis_BI429 0
Caldisericum_exile_AZM16c01 0
Candidatus_Chloracidobacterium_thermophilum_B 0
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_tundricola_MP5ACTX9 0
Terriglobus_roseus_DSM_18391 0
Bdellovibrio_bacteriovorus_HD100 0
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_denitrificans_OS217 0
Xanthomonas_axonopodis_pv._citri_str._306 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 0
Cenarchaeum_symbiosum_A 0
Methanocella_paludicola_SANAE 1
Methanosphaerula_palustris_E1-9c 0
Methanoculleus_bourgensis_MS2 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_collinus_Tu_365 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Mycobacterium_sp._JDM601 0
Desulfosporosinus_meridiei_DSM_13257 0
Clostridium_botulinum_BKT015925 0
Rhodothermus_marinus_SG0.5JP17-172 0
Prevotella_dentalis_DSM_3688 0
Bacteroides_xylanisolvens_XB1A 0
Bacteroides_fragilis_638R 0
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 0
Vibrio_vulnificus_CMCP6 0
Vibrio_vulnificus_YJ016 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_MJ-1236 0
Alteromonas_macleodii_str._'Ionian_Sea_U8' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_ATCC_27126 0
Xanthomonas_citri_subsp._citri_Aw12879 0
Xanthomonas_axonopodis_Xac29-1 0
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Mus_musculus_69_38   (House mouse)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
NCBI_plasmid_sequences_(Plasmids) 0
NCBI_2017_08_genome 158
Protein_Data_Bank_(all_PDB_sequenc) 0
TargetDB__(Targets) 0
STRING_v9.0.5_(STRING) 4
Uniprot_2018_03_genome 462

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.