SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 101898,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

101898 - NHL repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Saccoglossus_kowalevskii_v3.0 0
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_laevis_   (African clawed frog)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Lepisosteus_oculatus_76   (Spotted gar)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0
Oikopleura_dioica 0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   3
Adineta_vaga 13
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   11
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Heliconius_melpomene_   (Postman butterfly)   0
Bombyx_mori_   (Domestic silkworm)   1
Nasonia_vitripennis_   (Jewel wasp)   1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Atta_cephalotes_v1.1 0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 0
Drosophila_pseudoobscura_2.13 2
Drosophila_persimilis_1.3 2
Drosophila_suzukii 0
Drosophila_yakuba_1.3 0
Drosophila_simulans_1.3 0
Drosophila_sechellia_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   0
Drosophila_erecta_1.3 0
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Acyrthosiphon_pisum_   (Pea aphid)   0
Rhodnius_prolixus_22 2
Daphnia_pulex_   (Common water flea)   0
Strigamia_maritima_22 0
Sarcoptes_scabiei 0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Pristionchus_pacificus_ 0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 1
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 0
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 0
Mnemiopsis_leidyi   (Sea walnut)   0
Acropora_digitifera_v1.0 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 0
Amphimedon_queenslandica 2
Trichoplax_adhaerens_ 0
Proterospongia_sp._ATCC_50818_ 3
Monosiga_brevicollis_ 0
Mortierella_verticillata_NRRL_6337_ 0
Rhizopus_oryzae_RA_99-880_ 0
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Melampsora_laricis-populina_ 0
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 1
Sphaerobolus_stellatus_v1.0 0
Piloderma_croceum_F_1598_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Pisolithus_microcarpus_441_v1.0 1
Pisolithus_tinctorius_Marx_270_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 1
Pleurotus_ostreatus_   (Oyster mushroom)   1
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Galerina_marginata_v1.0 0
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Dichomitus_squalens 0
Trametes_versicolor_v1.0 0
Tremella_mesenterica_   (Witches' butter)   0
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Neurospora_tetrasperma_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_albo-atrum_VaMs.102_ 0
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 1
Trichoderma_atroviride_ 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Blumeria_graminis_22 0
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 0
Stagonospora_nodorum_ 0
Mycosphaerella_graminicola_IPO323_ 0
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 0
Septoria_musiva_v1.0 1
Mycosphaerella_fijiensis_CIRAD86_ 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 0
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_immitis_RS_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_verrucosum_HKI_0517_ 0
Arthroderma_benhamiae_CBS_112371_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Trichophyton_rubrum_CBS_118892_ 0
Aspergillus_zonatus_v1.0 0
Aspergillus_brasiliensis_v1.0 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_glaucus 0
Aspergillus_carbonarius_ITEM_5010_ 0
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 0
Aspergillus_niger_22 0
Aspergillus_clavatus_NRRL_1_ 1
Penicillium_marneffei_ATCC_18224_ 0
Hansenula_polymorpha_v2.0 1
Dekkera_bruxellensis_CBS_2499_v2.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_tropicalis_MYA-3404_ 1
Candida_parapsilosis_ 0
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 0
Debaromyces_hansenii 0
Wickerhamomyces_anomalus 0
Pichia_pastoris_GS115_ 0
Yarrowia_lipolytica_CLIB122 0
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 0
Vanderwaltozyma_polyspora_DSM_70294_ 0
Candida_glabrata_CBS138 0
Lachancea_kluyveri_ 0
Ashbya_gossypii_ATCC_10895_ 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 0
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   0
Allomyces_macrogynus_ATCC_38327_ 1
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 0
Entamoeba_dispar_1.2 1
Entamoeba_invadens_1.2 0
Entamoeba_histolytica_1 0
Selaginella_moellendorffii_ 2
Pinus_taeda   (Loblolly pine)   2
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   8
Theobroma_cacao_B97-61/B2_v1   (Cacao)   2
Gossypium_raimondii_v221 7
Citrus_clementina_v165 2
Citrus_sinensis_v154   (Sweet orange)   3
Thellungiella_halophila_v173 4
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   3
Capsella_rubella_v183 4
Arabidopsis_lyrata_   (Lyrate rockcress)   3
Arabidopsis_thaliana_10   (Thale cress)   5
Carica_papaya_   (Papaya)   2
Medicago_truncatula_   (Barrel medic)   5
Phaseolus_vulgaris_v186   (French bean)   3
Glycine_max_v109   (Soybean)   8
Cucumis_sativus_v122   (Cucumber)   4
Fragaria_vesca_   (Wild strawberry)   3
Malus_domestica_v196   (Apple)   9
Prunus_persica_v139   (Peach)   4
Linum_usitatissimum_v200   (Flax)   6
Manihot_esculenta_v147   (Cassava)   3
Populus_trichocarpa_v156   (Black cottonwood)   6
Vitis_vinifera_   (Wine grape)   2
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   5
Solanum_tuberosum_   (Potato)   5
Actinidia_chinensis_Hongyang_ 3
Aquilegia_coerulea_v195 2
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   6
Aegilops_tauschii_22 3
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_barthii_22   (African wild rice)   2
Oryza_meridionalis_22 4
Oryza_glumaepatula_22 1
Oryza_glaberrima   (African rice)   2
Oryza_punctata_22 3
Oryza_nivara_22 2
Oryza_brachyantha_22   (Malo sina)   3
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   2
Oryza_sativa_v193   (Rice)   2
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   2
Panicum_virgatum_v202   (Switchgrass)   6
Setaria_italica_v164   (Foxtail millet)   2
Zea_mays_subsp._mays_   (Maize)   4
Zea_mays_v181   (Maize)   4
Sorghum_bicolor_   (Sorghum)   4
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   1
Amborella_trichopoda_22 3
Physcomitrella_patens 2
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_variabilis_sp._NC64A_ 0
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 0
Ostreococcus_sp._RCC809_ 0
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 1
Cyanidioschyzon_merolae_strain_10D_22 0
Cyanidioschyzon_merolae 0
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 10
Giardia_lamblia_2.3 1
Cyanophora_paradoxa_ 2
Leishmania_mexicana_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_congolense_2.4 2
Aureococcus_anophagefferens_ 0
Albugo_laibachii_22 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Phytophthora_capsici_ 1
Fragilariopsis_cylindrus 3
Thalassiosira_pseudonana_CCMP1335 1
Perkinsus_marinus_ATCC_50983_ 3
Tetrahymena_thermophila_SB210_1_ 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Babesia_bovis_T2Bo_ 0
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 0
Plasmodium_knowlesi_strain_H_ 0
Symbiodinium_minutum_clade_B1_v1.2 4
Naegleria_gruberi_ 12
Trichomonas_vaginalis_ 2
Guillardia_theta_CCMP2712_v1.0_ 4
Emiliania_huxleyi_CCMP1516_ 6
Thermobaculum_terrenum_ATCC_BAA-798 0
Acaryochloris_marina_MBIC11017 0
Synechocystis_sp._PCC_6803 0
Microcoleus_sp._PCC_7113 1
Trichodesmium_erythraeum_IMS101 0
Geitlerinema_sp._PCC_7407 0
Cyanothece_sp._PCC_8802 0
Gloeocapsa_sp._PCC_7428 0
cyanobacterium_UCYN-A 0
Gloeobacter_violaceus_PCC_7421 0
Rivularia_sp._PCC_7116 1
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 0
'Nostoc_azollae'_0708 0
Nostoc_sp._PCC_7107 0
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 0
Nostoc_sp._PCC_7524 0
Anabaena_sp._90 1
Conexibacter_woesei_DSM_14684 1
Acidimicrobium_ferrooxidans_DSM_10331 0
Thermobispora_bispora_DSM_43833 0
Nakamurella_multipartita_DSM_44233 0
Acidothermus_cellulolyticus_11B 0
Modestobacter_marinus 0
Blastococcus_saxobsidens_DD2 1
Kineococcus_radiotolerans_SRS30216 0
Catenulispora_acidiphila_DSM_44928 0
Stackebrandtia_nassauensis_DSM_44728 1
Frankia_symbiont_of_Datisca_glomerata 0
Frankia_sp._EAN1pec 0
Frankia_alni_ACN14a 0
Thermobifida_fusca_YX 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Thermomonospora_curvata_DSM_43183 2
Streptosporangium_roseum_DSM_43021 0
Kitasatospora_setae_KM-6054 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Actinosynnema_mirum_DSM_43827 1
Saccharomonospora_viridis_DSM_43017 0
Pseudonocardia_dioxanivorans_CB1190 0
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 0
Kribbella_flavida_DSM_17836 0
Nocardioides_sp._JS614 1
Microlunatus_phosphovorus_NM-1 2
Salinispora_arenicola_CNS-205 0
Salinispora_tropica_CNB-440 0
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 0
Micromonospora_aurantiaca_ATCC_27029 0
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Actinoplanes_missouriensis_431 1
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_polyisoprenivorans_VH2 0
Gordonia_bronchialis_DSM_43247 0
Rhodococcus_jostii_RHA1 0
Rhodococcus_opacus_B4 0
Rhodococcus_erythropolis_PR4 2
Nocardia_cyriacigeorgica_GUH-2 0
Nocardia_farcinica_IFM_10152 0
Mycobacterium_vanbaalenii_PYR-1 0
Corynebacterium_resistens_DSM_45100 0
Corynebacterium_aurimucosum_ATCC_700975 0
Corynebacterium_jeikeium_K411 0
Corynebacterium_variabile_DSM_44702 0
Corynebacterium_diphtheriae_NCTC_13129 0
Sanguibacter_keddieii_DSM_10542 0
Beutenbergia_cavernae_DSM_12333 0
Microbacterium_testaceum_StLB037 1
Jonesia_denitrificans_DSM_20603 0
Intrasporangium_calvum_DSM_43043 0
Brachybacterium_faecium_DSM_4810 0
Isoptericola_variabilis_225 0
Xylanimonas_cellulosilytica_DSM_15894 1
Cellulomonas_flavigena_DSM_20109 0
Cellulomonas_fimi_ATCC_484 0
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_phenanthrenivorans_Sphe3 0
Arthrobacter_chlorophenolicus_A6 0
Arthrobacter_aurescens_TC1 0
Arthrobacter_arilaitensis_Re117 0
Kocuria_rhizophila_DC2201 0
Rothia_mucilaginosa_DY-18 0
Rothia_dentocariosa_ATCC_17931 0
Arthrobacter_sp._Rue61a 0
Arthrobacter_sp._FB24 0
Renibacterium_salmoninarum_ATCC_33209 0
Micrococcus_luteus_NCTC_2665 0
Arcanobacterium_haemolyticum_DSM_20595 0
Dehalococcoides_ethenogenes_195 0
Anaerolinea_thermophila_UNI-1 0
Thermomicrobium_roseum_DSM_5159 0
Sphaerobacter_thermophilus_DSM_20745 0
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_sp._MS-G 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aurantiacus_J-10-fl 0
Truepera_radiovictrix_DSM_17093 3
Deinococcus_gobiensis_I-0 0
Deinococcus_deserti_VCD115 0
Deinococcus_proteolyticus_MRP 0
Oceanithermus_profundus_DSM_14977 0
Marinithermus_hydrothermalis_DSM_14884 0
Meiothermus_ruber_DSM_1279 0
Thermus_scotoductus_SA-01 2
Symbiobacterium_thermophilum_IAM_14863 1
Clostridiales_genomosp._BVAB3_str._UPII9-5 1
Clostridium_thermocellum_ATCC_27405 0
Sulfobacillus_acidophilus_DSM_10332 1
butyrate-producing_bacterium_SS3/4 0
Desulfosporosinus_orientis_DSM_765 0
Desulfotomaculum_acetoxidans_DSM_771 0
Eubacterium_eligens_ATCC_27750 0
Clostridium_phytofermentans_ISDg 0
[Ruminococcus]_obeum 0
Eubacterium_rectale_ATCC_33656 0
Roseburia_intestinalis 0
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 0
Alkaliphilus_metalliredigens_QYMF 0
Candidatus_Arthromitus_sp._SFB-mouse-Japan 0
Clostridium_novyi_NT 0
Clostridium_kluyveri_DSM_555 1
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_cellulovorans_743B 0
Halanaerobium_hydrogeniformans 0
Exiguobacterium_sp._MH3 1
Brevibacillus_brevis_NBRC_100599 0
Paenibacillus_mucilaginosus_3016 1
Bacillus_selenitireducens_MLS10 0
Geobacillus_thermoglucosidasius_C56-YS93 0
Candidatus_Cloacamonas_acidaminovorans 0
Gemmatimonas_aurantiaca_T-27 0
Ignavibacterium_album_JCM_16511 4
Chlorobium_chlorochromatii_CaD3 0
Chlorobium_phaeobacteroides_DSM_266 0
Chloroherpeton_thalassium_ATCC_35110 0
Prosthecochloris_aestuarii_DSM_271 1
Haliscomenobacter_hydrossis_DSM_1100 2
Saprospira_grandis_str._Lewin 0
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 0
Salinibacter_ruber_M8 0
Rhodothermus_marinus_DSM_4252 1
Flexibacter_litoralis_DSM_6794 1
Belliella_baltica_DSM_15883 1
Cyclobacterium_marinum_DSM_745 0
Fibrella_aestuarina 0
Leadbetterella_byssophila_DSM_17132 0
Dyadobacter_fermentans_DSM_18053 0
Cytophaga_hutchinsonii_ATCC_33406 2
Spirosoma_linguale_DSM_74 2
Runella_slithyformis_DSM_19594 0
Parabacteroides_distasonis_ATCC_8503 0
Tannerella_forsythia_ATCC_43037 1
Odoribacter_splanchnicus_DSM_20712 3
Bacteroides_sp._CF50 1
Prevotella_denticola_F0289 1
Porphyromonas_asaccharolytica_DSM_20707 0
Porphyromonas_gingivalis_ATCC_33277 0
Alistipes_finegoldii_DSM_17242 0
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_helcogenes_P_36-108 0
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Bacteroides_fragilis_YCH46 0
Pedobacter_saltans_DSM_12145 0
Solitalea_canadensis_DSM_3403 0
Pedobacter_heparinus_DSM_2366 0
Sphingobacterium_sp._21 1
Fluviicola_taffensis_DSM_16823 3
Owenweeksia_hongkongensis_DSM_17368 1
Zunongwangia_profunda_SM-A87 0
Krokinobacter_sp._4H-3-7-5 0
Lacinutrix_sp._5H-3-7-4 0
Maribacter_sp._HTCC2170 1
Robiginitalea_biformata_HTCC2501 0
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 1
Zobellia_galactanivorans 0
Cellulophaga_algicola_DSM_14237 1
Cellulophaga_lytica_DSM_7489 1
Flavobacteriaceae_bacterium_3519-10 0
Weeksella_virosa_DSM_16922 1
Flavobacterium_indicum_GPTSA100-9 1
Flavobacterium_branchiophilum_FL-15 0
Flavobacterium_columnare_ATCC_49512 0
Flavobacterium_johnsoniae_UW101 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Phycisphaera_mikurensis_NBRC_102666 0
Isosphaera_pallida_ATCC_43644 0
Planctomyces_brasiliensis_DSM_5305 0
Planctomyces_limnophilus_DSM_3776 0
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 0
Methylacidiphilum_infernorum_V4 0
Opitutus_terrae_PB90-1 0
Akkermansia_muciniphila_ATCC_BAA-835 1
Turneriella_parva_DSM_21527 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 0
Leptospira_interrogans_serovar_Lai_str._IPAV 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Brachyspira_intermedia_PWS/A 0
Brachyspira_hyodysenteriae_WA1 0
Borrelia_turicatae_91E135 0
Spirochaeta_smaragdinae_DSM_11293 0
Spirochaeta_caldaria_DSM_7334 1
Treponema_primitia_ZAS-2 1
Treponema_paraluiscuniculi_Cuniculi_A 0
Treponema_succinifaciens_DSM_2489 0
Treponema_pallidum_subsp._pallidum_SS14 0
Spirochaeta_africana_DSM_8902 1
Petrotoga_mobilis_SJ95 1
Mesotoga_prima_MesG1.Ag.4.2 1
Fervidobacterium_pennivorans_DSM_9078 0
Thermosipho_africanus_TCF52B 1
Thermotoga_thermarum_DSM_5069 0
Thermotoga_naphthophila_RKU-10 0
Thermotoga_petrophila_RKU-1 0
Persephonella_marina_EX-H1 0
Thermocrinis_albus_DSM_14484 0
Hydrogenobacter_thermophilus_TK-6 0
Candidatus_Chloracidobacterium_thermophilum_B 2
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 1
Candidatus_Koribacter_versatilis_Ellin345 1
Terriglobus_saanensis_SP1PR4 0
Terriglobus_roseus_DSM_18391 0
Acidobacterium_capsulatum_ATCC_51196 1
Candidatus_Nitrospira_defluvii 0
candidate_division_SR1_bacterium_RAAC1_SR1_1 1
Acidithiobacillus_ferrooxidans_ATCC_53993 0
Bacteriovorax_marinus_SJ 0
Bdellovibrio_bacteriovorus_HD100 0
Nitratifractor_salsuginis_DSM_16511 1
Arcobacter_sp._L 0
Arcobacter_nitrofigilis_DSM_7299 0
Helicobacter_cetorum_MIT_00-7128 0
Sulfurovum_sp._NBC37-1 0
Desulfomonile_tiedjei_DSM_6799 0
Syntrophobacter_fumaroxidans_MPOB 0
Desulfurivibrio_alkaliphilus_AHT2 0
Desulfotalea_psychrophila_LSv54 0
Desulfobulbus_propionicus_DSM_2032 0
Desulfatibacillum_alkenivorans_AK-01 0
Desulfococcus_oleovorans_Hxd3 1
Desulfovibrio_africanus_str._Walvis_Bay 0
Geobacter_daltonii_FRC-32 0
Geobacter_sp._M21 1
Geobacter_uraniireducens_Rf4 0
Geobacter_lovleyi_SZ 0
Geobacter_bemidjiensis_Bem 1
Geobacter_sulfurreducens_KN400 0
Geobacter_metallireducens_GS-15 0
Pelobacter_propionicus_DSM_2379 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 1
Anaeromyxobacter_sp._Fw109-5 0
Anaeromyxobacter_dehalogenans_2CP-1 0
Stigmatella_aurantiaca_DW4/3-1 1
Corallococcus_coralloides_DSM_2259 2
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1
Aromatoleum_aromaticum_EbN1 0
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2
Leptothrix_cholodnii_SP-6 1
Burkholderia_phytofirmans_PsJN 0
Burkholderia_phymatum_STM815 0
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 0
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 0
Ralstonia_solanacearum_CFBP2957 2
Burkholderia_sp._CCGE1002 0
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_ambifaria_AMMD 0
Burkholderia_cenocepacia_HI2424 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_vietnamiensis_G4 0
Burkholderia_gladioli_BSR3 0
Verminephrobacter_eiseniae_EF01-2 0
Ramlibacter_tataouinensis_TTB310 0
Delftia_sp._Cs1-4 0
Delftia_acidovorans_SPH-1 0
Polaromonas_sp._JS666 1
Polaromonas_naphthalenivorans_CJ2 1
Rhodoferax_ferrireducens_T118 0
Collimonas_fungivorans_Ter331 0
Thiobacillus_denitrificans_ATCC_25259 0
Nitrosospira_multiformis_ATCC_25196 1
Nitrosomonas_sp._Is79A3 1
Asticcacaulis_excentricus_CB_48 0
Caulobacter_sp._K31 0
Sphingopyxis_alaskensis_RB2256 0
Sphingomonas_wittichii_RW1 0
Maricaulis_maris_MCS10 0
Pseudovibrio_sp._FO-BEG1 0
Jannaschia_sp._CCS1 0
Tistrella_mobilis_KA081020-065 0
Azospirillum_brasilense_Sp245 0
Acetobacter_pasteurianus_IFO_3283-01 0
Starkeya_novella_DSM_506 0
Methylobacterium_chloromethanicum_CM4 0
Methylobacterium_extorquens_AM1 0
Methylobacterium_populi_BJ001 0
Methylobacterium_nodulans_ORS_2060 0
Methylobacterium_radiotolerans_JCM_2831 0
Brucella_canis_ATCC_23365 0
Brucella_suis_ATCC_23445 0
Brucella_melitensis_ATCC_23457 0
Sinorhizobium_fredii_NGR234 0
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_tumefaciens_str._C58 1
Mesorhizobium_sp._BNC1 1
Mesorhizobium_opportunistum_WSM2075 0
Methylocella_silvestris_BL2 1
Beijerinckia_indica_subsp._indica_ATCC_9039 0
Hyphomicrobium_sp._MC1 0
Bradyrhizobium_japonicum_USDA_110 1
Bradyrhizobium_sp._ORS_278 1
Methylocystis_sp._SC2 0
Teredinibacter_turnerae_T7901 0
Cellvibrio_japonicus_Ueda107 0
Oceanimonas_sp._GK1 1
Vibrio_sp._Ex25 0
Vibrio_harveyi_ATCC_BAA-1116 0
Vibrio_parahaemolyticus_RIMD_2210633 1
Vibrio_splendidus_LGP32 0
Vibrio_anguillarum_775 0
Idiomarina_loihiensis_L2TR 1
Shewanella_piezotolerans_WP3 0
Shewanella_denitrificans_OS217 0
Shewanella_baltica_OS185 0
Shewanella_woodyi_ATCC_51908 0
Shewanella_sp._MR-4 0
Shewanella_violacea_DSS12 0
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_sp._SM9913 0
Pseudoalteromonas_atlantica_T6c 0
Pseudoalteromonas_haloplanktis_TAC125 1
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 0
Marinobacter_adhaerens_HP15 1
Marinobacter_sp._BSs20148 0
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 1
Hahella_chejuensis_KCTC_2396 0
Rhodanobacter_denitrificans 0
Frateuria_aurantia_DSM_6220 0
Stenotrophomonas_maltophilia_K279a 0
Halothiobacillus_neapolitanus_c2 0
Thioalkalivibrio_sp._K90mix 1
Nitrosococcus_watsonii_C-113 0
Nitrosococcus_halophilus_Nc4 1
Nitrosococcus_oceani_ATCC_19707 0
gamma_proteobacterium_HdN1 0
Photorhabdus_asymbiotica 0
Serratia_sp._ATCC_39006 0
Serratia_proteamaculans_568 0
Dickeya_zeae_Ech1591 0
Pantoea_sp._At-9b 0
Enterobacteriaceae_bacterium_strain_FGI_57 0
Salmonella_bongori_NCTC_12419 0
Escherichia_fergusonii_ATCC_35469 0
Enterobacter_cloacae_subsp._dissolvens_SDM 0
Citrobacter_koseri_ATCC_BAA-895 0
Azotobacter_vinelandii_DJ 1
Pseudomonas_sp._TKP 1
Pseudomonas_sp._UW4 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 2
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_stutzeri_A1501 1
Pseudomonas_fulva_12-X 0
Pseudomonas_putida_F1 0
Pseudomonas_protegens_Pf-5 1
Pseudomonas_fluorescens_SBW25 1
Pseudomonas_mendocina_ymp 0
Pseudomonas_aeruginosa_UCBPP-PA14 1
Pseudomonas_sp._VLB120 0
Psychrobacter_sp._G 0
Psychrobacter_cryohalolentis_K5 0
Moraxella_catarrhalis_RH4 0
Acinetobacter_calcoaceticus_PHEA-2 0
Methylophaga_sp._JAM1 1
Candidatus_Caldiarchaeum_subterraneum 0
Cenarchaeum_symbiosum_A 0
Candidatus_Nitrosopumilus_sp._AR2 0
Nitrosopumilus_maritimus_SCM1 0
Pyrolobus_fumarii_1A 1
Pyrobaculum_sp._1860 1
Thermoproteus_uzoniensis_768-20 1
halophilic_archaeon_DL31 0
Methanocella_arvoryzae_MRE50 1
Methanosaeta_thermophila_PT 0
Methanohalobium_evestigatum_Z-7303 0
Methanosarcina_barkeri_str._Fusaro 0
Methanosphaerula_palustris_E1-9c 0
Methanoregula_boonei_6A8 0
Methanospirillum_hungatei_JF-1 0
Methanoplanus_petrolearius_DSM_11571 0
Methanoculleus_bourgensis_MS2 0
Thermococcus_kodakarensis_KOD1 0
Pyrococcus_abyssi_GE5 0
Halopiger_xanaduensis_SH-6 0
Haloterrigena_turkmenica_DSM_5511 0
Natrinema_sp._J7-2 0
Haloquadratum_walsbyi_DSM_16790 0
Halogeometricum_borinquense_DSM_11551 0
Haloferax_mediterranei_ATCC_33500 0
Haloferax_volcanii_DS2 0
Halomicrobium_mukohataei_DSM_12286 0
Haloarcula_marismortui_ATCC_43049 0
Halalkalicoccus_jeotgali_B3 0
Methanococcus_voltae_A3 0
Methanothermobacter_thermautotrophicus_str._Delta_H 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   3
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Saccharomyces_cerevisiae_FostersB 0
Saccharomyces_cerevisiae_FostersO 1
Saccharomyces_cerevisiae_LalvinQA23 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Schizosaccharomyces_pombe_972h-_ 0
Batrachochytrium_dendrobatidis_JEL423_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   2
Hordeum_vulgare_22   (Domesticated barley)   1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 0
Chroococcidiopsis_thermalis_PCC_7203 1
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Cyanobium_gracile_PCC_6307 0
Synechococcus_sp._JA-2-3B'a(2-13) 0
Synechococcus_sp._JA-3-3Ab 0
Synechococcus_sp._CC9902 0
Synechococcus_sp._CC9605 0
Prochlorococcus_marinus_str._MIT_9313 0
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7822 2
Cyanothece_sp._PCC_7424 0
Cyanothece_sp._ATCC_51142 0
Cyanothece_sp._PCC_8801 0
Cyanobacterium_stanieri_PCC_7202 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Cylindrospermum_stagnale_PCC_7417 1
Anabaena_cylindrica_PCC_7122 1
Spiroplasma_syrphidicola_EA-1 0
Frankia_sp._EuI1c 0
Frankia_sp._CcI3 0
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 2
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 0
Actinoplanes_friuliensis_DSM_7358 0
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_kansasii_ATCC_12478 0
Corynebacterium_maris_DSM_45190 0
Corynebacterium_callunae_DSM_20147 0
Corynebacterium_diphtheriae_INCA_402 0
Corynebacterium_diphtheriae_HC02 0
Corynebacterium_diphtheriae_31A 0
Bifidobacterium_bifidum_BGN4 1
Deinococcus_peraridilitoris_DSM_19664 0
Thermus_thermophilus_JL-18 0
Thermus_thermophilus_HB8 2
Faecalibacterium_prausnitzii_L2-6 0
Sulfobacillus_acidophilus_TPY 2
Desulfosporosinus_meridiei_DSM_13257 0
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 0
Roseburia_intestinalis_XB6B4 0
Candidatus_Arthromitus_sp._SFB-mouse-Yit 0
Clostridium_autoethanogenum_DSM_10061 0
Clostridium_kluyveri_NBRC_12016 1
Clostridium_botulinum_BKT015925 0
Clostridium_botulinum_Ba4_str._657 0
Thermacetogenium_phaeum_DSM_12270 1
Lactobacillus_johnsonii_N6.2 0
Lactobacillus_johnsonii_DPC_6026 0
Lactobacillus_johnsonii_NCC_533 0
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Geobacillus_sp._Y4.1MC1 0
Bacillus_infantis_NRRL_B-14911 0
Salinibacter_ruber_DSM_13855 1
Rhodothermus_marinus_SG0.5JP17-172 1
Emticicia_oligotrophica_DSM_17448 0
Prevotella_sp._oral_taxon_299_str._F0039 1
Prevotella_dentalis_DSM_3688 0
Porphyromonas_gingivalis_TDC60 0
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 3
Nonlabens_dokdonensis_DSW-6 0
Psychroflexus_torquis_ATCC_700755 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Singulisphaera_acidiphila_DSM_18658 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 0
Leptospira_interrogans_serovar_Lai_str._56601 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Brachyspira_pilosicoli_WesB 0
Brachyspira_pilosicoli_B2904 0
Brachyspira_pilosicoli_P43/6/78 0
Treponema_pallidum_str._Fribourg-Blanc 0
Treponema_pallidum_subsp._pertenue_str._Gauthier 0
Treponema_pallidum_subsp._pertenue_str._CDC2 0
Treponema_pallidum_subsp._pertenue_str._SamoaD 0
Treponema_pallidum_subsp._pallidum_str._Mexico_A 0
Treponema_pallidum_subsp._pallidum_str._Chicago 0
Treponema_pallidum_subsp._pallidum_DAL-1 0
Treponema_pallidum_subsp._pallidum_str._Nichols 0
Hydrogenobacter_thermophilus_TK-6 0
Leptospirillum_ferriphilum_ML-04 0
Acidithiobacillus_ferrooxidans_ATCC_23270 0
Bdellovibrio_bacteriovorus_str._Tiberius 0
Geobacter_sp._M18 0
Geobacter_sulfurreducens_PCA 0
Sorangium_cellulosum_So0157-2 2
Anaeromyxobacter_sp._K 0
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 1
Burkholderia_phenoliruptrix_BR3459a 0
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 1
Burkholderia_sp._YI23 0
Burkholderia_sp._CCGE1003 0
Burkholderia_sp._KJ006 0
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_lata 0
Burkholderia_ambifaria_MC40-6 0
Burkholderia_cenocepacia_AU_1054 0
Burkholderia_multivorans_ATCC_17616 0
Variovorax_paradoxus_B4 1
Nitrosomonas_sp._AL212 0
Phaeobacter_gallaeciensis_DSM_17395 0
Phaeobacter_gallaeciensis_DSM_26640 0
Rhodobacter_sphaeroides_KD131 0
Rhodobacter_sphaeroides_ATCC_17025 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Acetobacter_pasteurianus_386B 0
Acetobacter_pasteurianus_IFO_3283-12 0
Acetobacter_pasteurianus_IFO_3283-01-42C 0
Acetobacter_pasteurianus_IFO_3283-32 0
Acetobacter_pasteurianus_IFO_3283-26 0
Acetobacter_pasteurianus_IFO_3283-22 0
Acetobacter_pasteurianus_IFO_3283-07 0
Acetobacter_pasteurianus_IFO_3283-03 0
Methylobacterium_extorquens_DM4 0
Brucella_canis_HSK_A52141 0
Brucella_suis_VBI22 0
Brucella_suis_1330 0
Brucella_suis_1330 0
Brucella_melitensis_NI 0
Brucella_melitensis_M5-90 0
Brucella_melitensis_M28 0
Brucella_melitensis_bv._1_str._16M 0
Sinorhizobium_fredii_USDA_257 0
Rhizobium_etli_CFN_42 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 0
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 1
Bradyrhizobium_japonicum_USDA_6 2
Simiduia_agarivorans_SA1_=_DSM_21679 0
Vibrio_parahaemolyticus_BB22OP 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1
Vibrio_anguillarum_Listonella_anguillarum_M3 0
Idiomarina_loihiensis_GSL_199 1
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 0
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1
Alteromonas_macleodii_str._'English_Channel_615' 1
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alcanivorax_dieselolei_B5 0
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 0
Stenotrophomonas_maltophilia_R551-3 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Thioalkalivibrio_nitratireducens_DSM_14787 1
Serratia_plymuthica_S13 0
Serratia_plymuthica_4Rx13 0
Serratia_marcescens_WW4 0
Serratia_liquefaciens_ATCC_27592 0
Salmonella_bongori_N268-08 0
Klebsiella_pneumoniae_subsp._pneumoniae_1084 0
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 0
Enterobacter_aerogenes_EA1509E 0
Escherichia_coli_042 1
Escherichia_coli_UMN026 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 0
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 0
Azotobacter_vinelandii_CA6 1
Azotobacter_vinelandii_CA 1
Pseudomonas_denitrificans_ATCC_13867 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_stutzeri_CCUG_29243 1
Pseudomonas_stutzeri_DSM_10701 1
Pseudomonas_stutzeri_DSM_4166 1
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_monteilii_SB3101 0
Pseudomonas_monteilii_SB3078 0
Pseudomonas_putida_H8234 0
Pseudomonas_putida_HB3267 0
Pseudomonas_putida_DOT-T1E 0
Pseudomonas_putida_S16 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_ND6 0
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 1
Pseudomonas_poae_RE*1-1-14 1
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_A506 1
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 1
Pseudomonas_resinovorans_NBRC_106553 0
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Acinetobacter_genomosp._13TU__RUH2624 0
Acinetobacter_sp.__SH024 0
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_AB307-0294 0
Acinetobacter_baumannii_AYE 0
Acinetobacter_baumannii_AB0057 0
Acinetobacter_junii__SH205 0
Candidatus_Nitrososphaera_gargensis_Ga9.2 0
Thermococcus_sp._AM4 1
Thermococcus_litoralis_DSM_5473 1
Halovivax_ruber_XH-70 1
Natrinema_pellirubrum_DSM_15624 0
Haloquadratum_walsbyi_C23 0
Natronomonas_moolapensis_8.8.11 0
Methanococcus_maripaludis_X1 1
Methanococcus_maripaludis_S2 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0
Arabidopsis_thaliana_10   (Thale cress)   2

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Heliconius_numata__(Incomplete) 0
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Lotus_japonicus__(Early_assembly) 1
Malus_x_domestica_(Duplicate)   (Apple)   9
Ricinus_communis__(Early_assembly)   (Castor bean)   1
Nicotiana_benthamiana_0.4.4_(Early_draft) 7
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   4
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   5
Phoenix_dactylifera__(Early_draft)   (Date palm)   2
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 9
TargetDB__(Targets) 15
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1
UniProt__viral_sequences_(Viral) 1
STRING_v9.0.5_(STRING) 115
Uniprot_2018_03_genome 12648
NCBI_2017_08_genome 7877
Protein_Data_Bank_(all_PDB_sequenc) 1
Protozoadb_2010_08_(Protozoadb) 8
NCBI_viral_sequences_(Viral) 1

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