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Domain combinations for 101912,103575,_gap_,81296,81296,81296,_gap_,48350,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

101912 - Sema domain
103575 - Plexin repeat
81296 - E set domains
81296 - E set domains
81296 - E set domains
48350 - GTPase activation domain, GAP

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pongo_abelii_76_2   (Sumatran orangutan)   1
Papio_anubis_76   (Olive baboon)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Poecilia_formosa_76   (Amazon molly)   1
Caenorhabditis_remanei_ 1
Caenorhabditis_elegans_76_235   (Roundworm)   4
Caenorhabditis_briggsae_2 2

Strains
Genome     Number
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1

Longest transcript per gene
Genome     Number
Pongo_abelii_69_2   (Sumatran orangutan)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Felis_catus_69   (Domestic cat)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Caenorhabditis_elegans_69_215   (Roundworm)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 6
NCBI_2017_08_genome 44
Uniprot_2018_03_genome 1880

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