SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Home > SCOP hierarchy > Domain combination - 103575,_gap_,53300,69179,_gap_,57196,69687,_gap_

Domain combinations for 103575,_gap_,53300,69179,_gap_,57196,69687,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

103575 - Plexin repeat
53300 - vWA-like
69179 - Integrin domains
57196 - EGF/Laminin
69687 - Integrin beta tail domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Otolemur_garnettii_76_3 (Small-eared galago) 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 0

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Canis_familiaris_76_3.1 (Dog) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Macropus_eugenii_76_1.0 (Tammar wallaby) 1

Gallus_gallus_76_4 (Chicken) 1

Anas_platyrhynchos_76_1.0 (Mallard) 1

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Anolis_carolinensis_76_2.0 (Green anole) 2

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_76_1 (Coelacanth) 2

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 1

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 4

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1

Astyanax_mexicanus_76 (Mexican tetra) 1

Danio_rerio_76_9 (Zebrafish) 2

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 0

Adineta_vaga 1

Nasonia_vitripennis_ (Jewel wasp) 1

Nematostella_vectensis_1.0 (Starlet sea anemone) 1

Hydra_vulgaris 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 0

Longest transcript per gene
Genome Number

Otolemur_garnettii_69_3 (Small-eared galago) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 0

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Canis_familiaris_69_3.1 (Dog) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Macropus_eugenii_69_1.0 (Tammar wallaby) 1

Gallus_gallus_69_2 (Chicken) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 1

Anolis_carolinensis_69_2.0 (Green anole) 2

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_69_1 (Coelacanth) 2

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1

Danio_rerio_69_9 (Zebrafish) 1

Others
Genome Number

STRING_v9.0.5_(STRING) 8

Uniprot_2018_03_genome 2584

NCBI_2017_08_genome 129

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]