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Domain combinations for 103575,_gap_,53300,69179,_gap_,69687,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

103575 - Plexin repeat
53300 - vWA-like
69179 - Integrin domains
69687 - Integrin beta tail domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Papio_anubis_76   (Olive baboon)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Procavia_capensis_76_1   (Cape rock hyrax)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Trichoplax_adhaerens_ 1

Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Procavia_capensis_69_1   (Cape rock hyrax)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   2

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
NCBI_2017_08_genome 21
Uniprot_2018_03_genome 832

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