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Home > SCOP hierarchy > Domain combination - 103575,_gap_,53300,_gap_,57196,57196,69687,_gap_,141072,49265,_gap_,49265,_gap_

Domain combinations for 103575,_gap_,53300,_gap_,57196,57196,69687,_gap_,141072,49265,_gap_,49265,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

103575 - Plexin repeat
53300 - vWA-like
57196 - EGF/Laminin
57196 - EGF/Laminin
69687 - Integrin beta tail domain
141072 - CalX-like
49265 - Fibronectin type III
49265 - Fibronectin type III

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 4

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_76_3.1 (Western gorilla) 2

Pongo_abelii_76_2 (Sumatran orangutan) 0

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Papio_anubis_76 (Olive baboon) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 5

Otolemur_garnettii_76_3 (Small-eared galago) 1

Microcebus_murinus_76_1 (Gray mouse lemur) 1

Mus_musculus_76_38 (House mouse) 6

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1

Cavia_porcellus_76_3 (Domestic guinea pig) 1

Sus_scrofa_76_10.2 (Pig) 3

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Equus_caballus_76_2 (Horse) 2

Pteropus_vampyrus_76_1 (Large flying fox) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Macropus_eugenii_76_1.0 (Tammar wallaby) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 2

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 1

Anolis_carolinensis_76_2.0 (Green anole) 1

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 1

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Pongo_abelii_69_2 (Sumatran orangutan) 0

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 2

Otolemur_garnettii_69_3 (Small-eared galago) 1

Microcebus_murinus_69_1 (Gray mouse lemur) 1

Mus_musculus_69_38 (House mouse) 1

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_69_3 (Domestic guinea pig) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Equus_caballus_69_2 (Horse) 1

Pteropus_vampyrus_69_1 (Large flying fox) 1

Macropus_eugenii_69_1.0 (Tammar wallaby) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Anolis_carolinensis_69_2.0 (Green anole) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 5

Homo_sapiens__(NCBI_version) (Human) 3

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 1

TargetDB__(Targets) 2

STRING_v9.0.5_(STRING) 10

Uniprot_2018_03_genome 9576

NCBI_2017_08_genome 262

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